FFCP PHASE1:Hg19::chr2:175711671..175711714,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175711671..175711714,- to FFCP PHASE1:Hg19::chr2:175711671..175711714,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485882_5end | |||
|cluster_id=chr2:175711671..175711714,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_CHN1_5end | |||
|id=chr2:175711671..175711714,- | |||
|ontology_enrichment_celltype=CL:0002620!2.48e-11!23;CL:0000057!2.10e-08!75;CL:0000055!2.88e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.74e-15;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.70e-15,23;CL:0000057,5.49e-08,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.46e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.91e-34!57;UBERON:0005068!2.91e-34!57;UBERON:0006241!2.91e-34!57;UBERON:0007135!2.91e-34!57;UBERON:0002616!7.26e-33!59;UBERON:0001017!7.63e-31!82;UBERON:0000955!2.09e-30!69;UBERON:0006238!2.09e-30!69;UBERON:0005743!2.06e-29!86;UBERON:0007023!2.32e-29!115;UBERON:0000073!3.04e-28!94;UBERON:0001016!3.04e-28!94;UBERON:0002780!4.95e-25!41;UBERON:0001890!4.95e-25!41;UBERON:0006240!4.95e-25!41;UBERON:0003080!4.88e-24!42;UBERON:0003075!1.22e-23!86;UBERON:0007284!1.22e-23!86;UBERON:0002346!2.76e-22!90;UBERON:0000153!4.70e-22!129;UBERON:0007811!4.70e-22!129;UBERON:0001893!5.27e-22!34;UBERON:0002020!5.78e-22!34;UBERON:0003528!5.78e-22!34;UBERON:0000033!1.05e-21!123;UBERON:0002791!4.22e-21!33;UBERON:0001869!8.55e-21!32;UBERON:0004121!1.04e-17!169;UBERON:0000475!2.34e-17!365;UBERON:0000924!4.18e-17!173;UBERON:0006601!4.18e-17!173;UBERON:0003056!2.13e-16!61;UBERON:0000956!5.87e-15!25;UBERON:0000203!5.87e-15!25;UBERON:0002619!1.21e-13!22;UBERON:0001950!4.96e-12!20;UBERON:0003076!2.64e-11!15;UBERON:0003057!2.64e-11!15;UBERON:0004733!3.40e-09!12;UBERON:0002028!3.40e-09!12;UBERON:0007277!3.40e-09!12;UBERON:0002420!6.37e-09!9;UBERON:0007245!6.37e-09!9;UBERON:0010009!6.37e-09!9;UBERON:0010011!6.37e-09!9;UBERON:0000454!6.37e-09!9;UBERON:0002308!1.18e-08!9;UBERON:0000125!1.18e-08!9;UBERON:0004732!3.80e-08!13;UBERON:0002199!7.90e-08!45;UBERON:0002416!7.90e-08!45;UBERON:0009663!3.71e-07!7;UBERON:0000200!4.75e-07!6;UBERON:0002680!5.39e-07!9;UBERON:0001895!5.39e-07!9;UBERON:0010092!5.39e-07!9;UBERON:0002097!5.86e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.17e-29;34!UBERON:0003528;4.85e-28;34!UBERON:0002020;4.85e-28;34!UBERON:0001869;7.90e-28;32!UBERON:0002791;2.33e-27;32!UBERON:0000073;3.06e-26;53!UBERON:0002616;3.06e-26;53!UBERON:0002780;5.49e-26;41!UBERON:0001890;5.49e-26;41!UBERON:0002619;4.80e-23;22!UBERON:0000956;1.12e-21;25!UBERON:0000203;1.12e-21;25!UBERON:0001950;2.40e-20;20!UBERON:0001017;4.52e-18;75!UBERON:0000955;1.94e-17;68!UBERON:0002420;1.31e-13;9!UBERON:0007245;1.31e-13;9!UBERON:0010009;1.31e-13;9!UBERON:0010011;1.31e-13;9!UBERON:0000454;1.31e-13;9!UBERON:0001016;3.27e-13;83!UBERON:0000125;3.40e-13;9!UBERON:0002308;3.40e-13;9!UBERON:0009663;1.02e-10;7!UBERON:0000200;1.36e-10;6!UBERON:0007023;1.10e-09;114!UBERON:0004733;2.48e-09;12!UBERON:0002028;2.48e-09;12!UBERON:0002298;2.99e-09;6!UBERON:0000349;8.49e-09;5!UBERON:0004732;1.94e-08;13!UBERON:0011216;4.56e-08;132!UBERON:0000369;1.61e-07;4!UBERON:0002435;1.61e-07;4!UBERON:0000204;1.61e-07;4!UBERON:0002097;4.03e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.17e-48,56;UBERON:0005068,1.17e-48,56;UBERON:0006241,1.17e-48,56;UBERON:0007135,1.17e-48,56;UBERON:0000073,4.78e-45,53;UBERON:0002616,4.78e-45,53;UBERON:0000955,4.38e-40,68;UBERON:0006238,4.38e-40,68;UBERON:0001017,1.68e-39,81;UBERON:0002780,7.55e-37,41;UBERON:0001890,7.55e-37,41;UBERON:0003080,7.55e-37,41;UBERON:0006240,7.55e-37,41;UBERON:0001016,8.16e-34,89;UBERON:0001893,4.31e-33,34;UBERON:0003528,4.99e-33,34;UBERON:0002020,4.99e-33,34;UBERON:0001869,4.23e-31,32;UBERON:0003075,5.10e-31,82;UBERON:0007284,5.10e-31,82;UBERON:0002791,1.50e-30,32;UBERON:0007023,2.90e-29,114;UBERON:0002346,7.97e-29,86;UBERON:0010371,1.66e-24,104;UBERON:0010314,2.82e-24,132;UBERON:0002619,5.05e-23,22;UBERON:0003056,2.12e-22,61;UBERON:0000956,1.29e-21,25;UBERON:0000203,1.29e-21,25;UBERON:0001950,2.51e-20,20;UBERON:0004121,6.23e-18,171;UBERON:0000924,6.23e-18,171;UBERON:0006601,6.23e-18,171;UBERON:0002420,1.17e-13,9;UBERON:0007245,1.17e-13,9;UBERON:0010009,1.17e-13,9;UBERON:0010011,1.17e-13,9;UBERON:0000454,1.17e-13,9;UBERON:0011216,2.24e-13,223;UBERON:0000125,3.24e-13,9;UBERON:0002308,3.24e-13,9;UBERON:0003076,1.35e-12,15;UBERON:0003057,1.35e-12,15;UBERON:0009663,9.16e-11,7;UBERON:0000200,1.37e-10,6;UBERON:0002097,1.99e-09,41;UBERON:0004733,2.68e-09,12;UBERON:0002028,2.68e-09,12;UBERON:0007277,2.68e-09,12;UBERON:0002298,3.38e-09,6;UBERON:0000349,8.72e-09,5;UBERON:0002199,9.11e-09,46;UBERON:0002416,9.11e-09,46;UBERON:0004732,2.09e-08,13;UBERON:0000369,1.61e-07,4;UBERON:0002435,1.61e-07,4;UBERON:0000204,1.61e-07,4;UBERON:0010082,1.61e-07,4 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.704772020479856,2.00146596706261,2.68176656656373,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0.940364164434263,2.0036519099174,0.821246550437305,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,1.02800749499755,0,0,1.4203434172042,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0,0,0,0,0,2.29932296161153,1.71813722741315,0.506039384039006,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.661743720148475,0.443458794925128,0.263504357079378,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0.624320153660641,0,1.19558944441441,1.40921398372518,1.78060238804945,1.68540968042698,0.408308342509787,0.368502951935304,0.929932030581889,10.6920257155385,4.69807165629258,1.82032272387605,0,0.336672227908132,0,1.10825646193673,7.46261955497424,8.88814607817157,1.50238058906597,0,4.30535125653269,11.1049842185655,8.68920794754204,0.900273288253207,8.03809728059823,4.12224864073007,12.4698293742165,1.35021065793013,9.64626351095866,2.52433774244115,12.610836113995,1.13152239773168,7.10019185033229,7.55640736707302,1.69560592310488,0,0,0,0,0.397589304964456,0,0,0,0,0,1.28648187638577,0,3.71494342425583,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,0.432359860250884,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,2.19761916788222,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.410952645100767,2.14873155887875,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.623912584592421,1.42743191037729,1.10391690523754,0.117141414992713,1.20378439891088,0,0,0.664225598535437,0,4.25729710893606,0,0,0,0,0.213455115606889,0,0,0,1.24053903909388,2.14846762603287,3.08726103876381,0,3.07024349440022,0.321707842287215,0,0.154209693802656,0.887808626565635,0.492762936082855,1.03850885836724,0,0,0,0,1.95184561879831,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.096670718292122,0.616194468458578,1.68854042198743,0.827019434907183,2.25582514223375,1.16013355131383,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,1.116475108079,0.949138274156178,1.33441135746677,0,1.71175595213568,0,0,1.07923474549989,1.09814811894422,0.824686816419805,0,0,0,0.48763373908959,0,0,3.00299805097569,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.573645408816206,0.0982490410131212,0,1.06428319221179,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,1.23408681925858,0,1.08006287447623,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,1.22587722705226,0,0,0,0,32.8068723762878,11.1128838964305,1.00177834520615,0,0,0,1.10513566212459,0,2.35217969754956,0,0.933118762985422,0,0,0,0.295930216910801,0,0,20.3559876679996,30.7990085897346,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.347249989866585,16.8290863304629,16.1599227758047,13.7323562685375,9.50981635408532,8.86642856860643,12.7243530349304,0,0,1.00035336054936,0,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70954934569617,6.79601664205766,5.95205112181096,2.42644078730437,0,13.821602297795,0,0,0,0.789168805698781,0,0,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,29.0656394877032,0,0,0,0.290967049465258,1.059073520298,1.12990370390266,0,0,31.0222900183806,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,8.40588404193705,4.24406674565178,0,0,0.788662062837943,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,16.6998234859954,10.2152554583682,0,0,0,0.449947783103001,0,22.112838623521,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,1.36310417428337,0,0,0,7.36912851260838,7.27279309584795,0,0,1.38823636338003,2.04365596629566,3.31391244277756,2.48083010905975,0,0,0,0,0.5013797880454,0,0,0,37.2148635586134,39.2924572984321,15.8992481997255,4.0138643698305,4.32623300993724,10.0596172765041,0,0,0,0,0,0.468334905806882,0,1.34329322598187,1.63599316893057,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.63718706865481,0.449803112163605,0.155262956876259,0,1.86089200190596,7.82617592717601,0.150257608997218,0.761610424337591,1.22061219961398,0.909243296012797,0.322231671127465,0.464033759878494,7.5638218852737,0.400027764663154,2.06037423109676,1.6837474438296,0,0,0,0,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| ||
|short_description=p4@CHN1 | |||
}} | }} |
Latest revision as of 07:58, 18 September 2015
Short description: | p4@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000485882_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.70e-15 | 23 |
fibroblast | 5.49e-08 | 76 |