FFCP PHASE1:Hg19::chr2:175869936..175869949,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175869936..175869949,- to FFCP PHASE1:Hg19::chr2:175869936..175869949,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469597_5end | |||
|cluster_id=chr2:175869936..175869949,- | |||
|coexpression_cluster_id=C4147 | |||
|description=CAGE_peak_14_at_CHN1_5end | |||
|id=chr2:175869936..175869949,- | |||
|ontology_enrichment_celltype=CL:0002319!2.26e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002553;5.77e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.05e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.06e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.77e-08;1!DOID:4549;5.77e-08;1!DOID:5861;5.77e-08;1!DOID:6496;5.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.90e-08,1;DOID:4549,2.90e-08,1;DOID:5861,2.90e-08,1;DOID:6496,2.90e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.83e-36!86;UBERON:0001017!1.04e-35!82;UBERON:0000073!9.14e-35!94;UBERON:0001016!9.14e-35!94;UBERON:0000955!5.86e-34!69;UBERON:0006238!5.86e-34!69;UBERON:0001049!3.48e-32!57;UBERON:0005068!3.48e-32!57;UBERON:0006241!3.48e-32!57;UBERON:0007135!3.48e-32!57;UBERON:0002780!1.93e-31!41;UBERON:0001890!1.93e-31!41;UBERON:0006240!1.93e-31!41;UBERON:0001869!2.07e-31!32;UBERON:0001893!6.16e-31!34;UBERON:0002616!9.37e-31!59;UBERON:0003080!2.17e-30!42;UBERON:0002020!2.42e-30!34;UBERON:0003528!2.42e-30!34;UBERON:0003075!5.15e-30!86;UBERON:0007284!5.15e-30!86;UBERON:0002791!1.12e-29!33;UBERON:0002346!5.90e-29!90;UBERON:0000956!1.06e-28!25;UBERON:0000203!1.06e-28!25;UBERON:0002619!1.15e-25!22;UBERON:0003056!1.32e-24!61;UBERON:0001950!1.60e-23!20;UBERON:0007023!1.92e-23!115;UBERON:0000033!1.07e-20!123;UBERON:0000153!1.63e-20!129;UBERON:0007811!1.63e-20!129;UBERON:0004121!6.58e-19!169;UBERON:0000924!1.23e-18!173;UBERON:0006601!1.23e-18!173;UBERON:0000025!1.06e-11!194;UBERON:0000064!7.14e-11!219;UBERON:0000477!2.56e-10!286;UBERON:0000483!3.39e-09!309;UBERON:0000119!6.91e-09!312;UBERON:0000200!8.66e-09!6;UBERON:0004111!2.26e-08!241;UBERON:0001871!2.42e-08!7;UBERON:0000481!5.70e-08!347;UBERON:0001872!1.63e-07!5;UBERON:0000475!2.06e-07!365;UBERON:0000062!2.24e-07!511;UBERON:0002021!2.66e-07!5;UBERON:0000349!2.98e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.19e-36;20!UBERON:0001869;1.09e-34;32!UBERON:0001893;1.26e-33;34!UBERON:0002619;2.70e-33;22!UBERON:0002791;1.64e-29;32!UBERON:0000956;3.13e-29;25!UBERON:0000203;3.13e-29;25!UBERON:0003528;6.09e-27;34!UBERON:0002020;6.09e-27;34!UBERON:0001872;2.09e-21;5!UBERON:0002780;2.94e-20;41!UBERON:0001890;2.94e-20;41!UBERON:0002021;5.11e-13;5!UBERON:0001017;1.04e-12;75!UBERON:0000073;2.55e-12;53!UBERON:0002616;2.55e-12;53!UBERON:0000955;2.08e-11;68!UBERON:0000200;1.63e-10;6!UBERON:0007023;1.34e-08;114!UBERON:0001016;1.58e-08;83!UBERON:0002022;2.11e-08;1!UBERON:0002581;5.77e-08;1!UBERON:0002902;5.77e-08;1!UBERON:0001882;5.77e-08;1!UBERON:0003112;5.77e-08;1!UBERON:0011158;5.77e-08;1!UBERON:0009899;5.77e-08;1!UBERON:0007190;5.77e-08;1!UBERON:0003128;5.77e-08;1!UBERON:0005403;5.77e-08;1!UBERON:0001703;5.77e-08;1!UBERON:0002241;5.77e-08;1!UBERON:0000369;1.48e-07;4!UBERON:0002435;1.48e-07;4!UBERON:0000204;1.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.22e-37,32;UBERON:0001950,7.06e-37,20;UBERON:0001893,6.14e-35,34;UBERON:0002619,1.67e-33,22;UBERON:0002791,6.08e-32,32;UBERON:0003528,5.62e-30,34;UBERON:0002020,5.62e-30,34;UBERON:0000956,2.05e-29,25;UBERON:0000203,2.05e-29,25;UBERON:0002780,1.15e-28,41;UBERON:0001890,1.15e-28,41;UBERON:0003080,1.15e-28,41;UBERON:0006240,1.15e-28,41;UBERON:0001017,1.98e-25,81;UBERON:0000073,5.33e-25,53;UBERON:0002616,5.33e-25,53;UBERON:0000955,2.46e-24,68;UBERON:0006238,2.46e-24,68;UBERON:0001049,1.58e-23,56;UBERON:0005068,1.58e-23,56;UBERON:0006241,1.58e-23,56;UBERON:0007135,1.58e-23,56;UBERON:0001016,1.42e-22,89;UBERON:0001872,2.90e-21,5;UBERON:0007023,1.54e-19,114;UBERON:0003056,1.54e-18,61;UBERON:0003075,3.12e-15,82;UBERON:0007284,3.12e-15,82;UBERON:0002346,2.14e-14,86;UBERON:0002021,4.73e-13,5;UBERON:0010371,2.00e-11,104;UBERON:0000200,1.10e-10,6;UBERON:0004121,3.71e-10,171;UBERON:0000924,3.71e-10,171;UBERON:0006601,3.71e-10,171;UBERON:0011216,4.97e-10,223;UBERON:0010314,9.66e-10,132;UBERON:0002022,2.19e-08,1;UBERON:0007190,3.58e-08,1;UBERON:0003112,4.71e-08,1;UBERON:0011158,4.71e-08,1;UBERON:0003128,4.71e-08,1;UBERON:0001703,4.71e-08,1;UBERON:0002241,4.71e-08,1;UBERON:0004761,4.71e-08,1;UBERON:0009617,4.71e-08,1;UBERON:0002902,6.19e-08,1;UBERON:0009899,6.19e-08,1;UBERON:0001882,8.12e-08,1;UBERON:0005403,8.12e-08,1;UBERON:0002581,8.69e-08,1;UBERON:0000369,1.35e-07,4;UBERON:0002435,1.35e-07,4;UBERON:0000204,1.35e-07,4;UBERON:0010082,1.35e-07,4 | |||
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| ||
|short_description=p14@CHN1 | |||
}} | }} |
Latest revision as of 08:13, 18 September 2015
Short description: | p14@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CHN1_5end |
Coexpression cluster: | C4147_extraskeletal_occipital_small_brain_medial_temporal_insula |
Association with transcript: | 0bp_to_ENST00000469597_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.90e-08 | 1 |
extraosseous chondrosarcoma | 2.90e-08 | 1 |
myxoid chondrosarcoma | 2.90e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 2.90e-08 | 1 |