FFCP PHASE1:Hg19::chr12:48152535..48152546,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16629 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000482843_5end | |||
|cluster_id=chr12:48152535..48152546,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_10_at_RAPGEF3_5end | |||
|id=chr12:48152535..48152546,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.28e-09;82!UBERON:0006222;7.53e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.24e-51!115;UBERON:0001049!5.09e-45!57;UBERON:0005068!5.09e-45!57;UBERON:0006241!5.09e-45!57;UBERON:0007135!5.09e-45!57;UBERON:0002616!2.72e-38!59;UBERON:0001017!4.01e-36!82;UBERON:0000955!1.32e-35!69;UBERON:0006238!1.32e-35!69;UBERON:0005743!4.53e-35!86;UBERON:0002780!9.38e-34!41;UBERON:0001890!9.38e-34!41;UBERON:0006240!9.38e-34!41;UBERON:0003080!1.06e-32!42;UBERON:0001893!8.93e-32!34;UBERON:0002020!1.14e-31!34;UBERON:0003528!1.14e-31!34;UBERON:0003075!1.86e-30!86;UBERON:0007284!1.86e-30!86;UBERON:0002791!2.06e-30!33;UBERON:0000073!3.23e-30!94;UBERON:0001016!3.23e-30!94;UBERON:0001869!9.23e-29!32;UBERON:0002346!2.08e-28!90;UBERON:0002619!9.44e-26!22;UBERON:0000033!1.39e-24!123;UBERON:0000153!8.90e-24!129;UBERON:0007811!8.90e-24!129;UBERON:0001950!1.29e-22!20;UBERON:0000956!5.66e-22!25;UBERON:0000203!5.66e-22!25;UBERON:0003056!7.90e-22!61;UBERON:0004111!1.19e-20!241;UBERON:0000025!5.59e-20!194;UBERON:0004121!5.71e-20!169;UBERON:0000924!4.38e-19!173;UBERON:0006601!4.38e-19!173;UBERON:0000477!9.73e-19!286;UBERON:0000483!1.41e-13!309;UBERON:0000119!3.13e-13!312;UBERON:0003076!4.04e-13!15;UBERON:0003057!4.04e-13!15;UBERON:0002308!3.21e-11!9;UBERON:0000125!3.21e-11!9;UBERON:0002420!4.33e-11!9;UBERON:0007245!4.33e-11!9;UBERON:0010009!4.33e-11!9;UBERON:0010011!4.33e-11!9;UBERON:0000454!4.33e-11!9;UBERON:0000475!1.07e-09!365;UBERON:0002298!1.17e-09!8;UBERON:0001871!1.75e-09!7;UBERON:0004733!2.58e-09!12;UBERON:0002028!2.58e-09!12;UBERON:0007277!2.58e-09!12;UBERON:0001872!3.50e-09!5;UBERON:0000349!5.00e-09!5;UBERON:0000064!6.38e-09!219;UBERON:0004732!1.96e-08!13;UBERON:0000481!2.03e-08!347;UBERON:0009663!2.14e-08!7;UBERON:0000467!9.27e-08!625;UBERON:0000922!9.95e-08!612;UBERON:0000480!1.07e-07!626;UBERON:0000923!2.67e-07!604;UBERON:0005291!2.67e-07!604;UBERON:0006598!2.67e-07!604;UBERON:0002532!2.67e-07!604;UBERON:0002050!3.06e-07!605;UBERON:0005423!3.06e-07!605;UBERON:0000062!3.58e-07!511;UBERON:0000369!3.66e-07!4;UBERON:0002435!3.66e-07!4;UBERON:0000204!3.66e-07!4;UBERON:0010082!3.66e-07!4;UBERON:0000200!4.13e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.29e-36;34!UBERON:0002619;1.69e-35;22!UBERON:0002780;8.06e-35;41!UBERON:0001890;8.06e-35;41!UBERON:0001869;3.12e-33;32!UBERON:0003528;1.01e-32;34!UBERON:0002020;1.01e-32;34!UBERON:0002791;2.94e-32;32!UBERON:0000956;4.35e-31;25!UBERON:0000203;4.35e-31;25!UBERON:0001950;1.46e-27;20!UBERON:0000073;1.19e-26;53!UBERON:0002616;1.19e-26;53!UBERON:0000955;1.21e-18;68!UBERON:0001872;7.12e-17;5!UBERON:0001017;1.21e-14;75!UBERON:0001954;4.86e-12;2!UBERON:0003022;4.86e-12;2!UBERON:0002421;4.86e-12;2!UBERON:0002600;4.86e-12;2!UBERON:0001016;7.07e-12;83!UBERON:0000349;3.00e-10;5!UBERON:0002021;9.39e-10;5!UBERON:0000125;1.98e-09;9!UBERON:0002308;1.98e-09;9!UBERON:0007023;3.56e-09;114!UBERON:0000200;3.33e-08;6!UBERON:0009663;4.30e-07;7!UBERON:0002336;5.88e-07;1!UBERON:0011215;5.88e-07;1!UBERON:0001018;5.88e-07;1!UBERON:0002473;5.88e-07;1!UBERON:0005340;5.88e-07;1!UBERON:0003544;5.88e-07;1!UBERON:0005970;5.88e-07;1!UBERON:0002316;5.88e-07;1!UBERON:0001020;5.88e-07;1!UBERON:0002437;5.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.14e-47,56;UBERON:0005068,2.14e-47,56;UBERON:0006241,2.14e-47,56;UBERON:0007135,2.14e-47,56;UBERON:0000073,5.30e-46,53;UBERON:0002616,5.30e-46,53;UBERON:0002780,2.29e-45,41;UBERON:0001890,2.29e-45,41;UBERON:0003080,2.29e-45,41;UBERON:0006240,2.29e-45,41;UBERON:0001893,3.51e-44,34;UBERON:0003528,2.21e-39,34;UBERON:0002020,2.21e-39,34;UBERON:0000955,9.18e-38,68;UBERON:0006238,9.18e-38,68;UBERON:0002791,6.54e-37,32;UBERON:0001017,7.10e-37,81;UBERON:0001869,1.05e-36,32;UBERON:0002619,8.60e-36,22;UBERON:0001016,1.04e-32,89;UBERON:0000956,2.41e-31,25;UBERON:0000203,2.41e-31,25;UBERON:0003075,7.08e-31,82;UBERON:0007284,7.08e-31,82;UBERON:0003056,2.86e-29,61;UBERON:0002346,3.28e-29,86;UBERON:0001950,7.88e-28,20;UBERON:0007023,1.39e-27,114;UBERON:0010371,1.70e-25,104;UBERON:0010314,9.66e-23,132;UBERON:0004121,1.77e-17,171;UBERON:0000924,1.77e-17,171;UBERON:0006601,1.77e-17,171;UBERON:0001872,1.94e-17,5;UBERON:0000025,8.89e-14,192;UBERON:0011216,3.45e-13,223;UBERON:0001954,4.89e-12,2;UBERON:0003022,4.89e-12,2;UBERON:0002421,4.89e-12,2;UBERON:0002600,4.89e-12,2;UBERON:0004111,5.92e-12,240;UBERON:0000349,4.25e-10,5;UBERON:0002021,8.35e-10,5;UBERON:0000125,1.80e-09,9;UBERON:0002308,1.80e-09,9;UBERON:0000200,4.40e-08,6;UBERON:0000483,4.50e-08,306;UBERON:0000119,6.17e-08,309;UBERON:0009663,3.88e-07,7;UBERON:0002336,5.90e-07,1;UBERON:0011215,5.90e-07,1;UBERON:0001018,5.90e-07,1;UBERON:0002473,5.90e-07,1;UBERON:0005340,5.90e-07,1;UBERON:0003544,5.90e-07,1;UBERON:0005970,5.90e-07,1;UBERON:0002316,5.90e-07,1;UBERON:0001020,5.90e-07,1;UBERON:0002437,5.90e-07,1;UBERON:0003112,9.67e-07,1;UBERON:0011158,9.67e-07,1;UBERON:0003128,9.67e-07,1;UBERON:0001703,9.67e-07,1;UBERON:0002241,9.67e-07,1;UBERON:0004761,9.67e-07,1;UBERON:0009617,9.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0,1.34324852833307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,4.84666373047609,0.649376687132959,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,1.68835014075571,0,0.442317039724898,1.18219047581419,0.438770794307945,0,0.139423744278603,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0,0,0,0,0,0,0,3.57226004797588,0.802577647298789,2.10838001152805,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0,1.45614830698521,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0.687481272035051,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,2.38568906942791,2.17925449778521,0,0,0,0,0,1.21499113316049,0,0.394028536495991,0.262272940674991,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,2.19781025814636,0.66116300871345,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,1.09823638411767,0.751145584238999,0.573409195690071,0.554645257684261,1.1177352529449,0,0.37494122388632,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,2.56241518587947,0,0,0.829550616910385,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,0,0.957803154342908,1.02558182120378,1.51243017733031,1.52145955421279,1.93770774758221,0,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,1.01306376927592,2.34323429584154,1.44680757550829,1.77564268542939,0.546974809018219,0.548257766857182,0.496211178389294,0,0.255524855279191,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0,0.543757863814654,1.90741043332262,0,0,0.313972371402056,0.471346769748006,0,0,1.29556554731173,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0,1.60374807980835,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,1.37415926980462,0.594092800654172,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,1.43339583151451,0,2.10773619591836,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0.0918948995348449,0,0.378893491091197,0,0,2.48239190068549,0,0.476128862927481,0,0,0.224263725161227,0.381882949668989,1.41482032270754,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0,1.33151354837103,0,0 | |||
|short_description=p10@RAPGEF3 | |||
}} |
Latest revision as of 13:04, 18 September 2015
Short description: | p10@RAPGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RAPGEF3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 10bp_to_ENST00000482843_5end |
EntrezGene: | RAPGEF3 |
HGNC: | 16629 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data