FFCP PHASE1:Hg19::chr4:786628..786671,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:786628..786671,- to FFCP PHASE1:Hg19::chr4:786628..786671,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10815 | |EntrezGene=10815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2309 | |HGNC=2309 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-148bp_to_ENST00000506404_5end | |||
|cluster_id=chr4:786628..786671,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_CPLX1_5end | |||
|id=chr4:786628..786671,- | |||
|ontology_enrichment_celltype=CL:0000542!1.57e-12!53;CL:0000051!1.57e-12!53;CL:0000838!2.12e-11!52;CL:0000784!1.21e-07!3;CL:0000084!1.97e-07!25;CL:0000827!1.97e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.42e-15;3!CL:0000946;2.60e-12;1!CL:0000786;2.60e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.06e-15,3;CL:0000946,1.96e-12,1;CL:0000786,1.96e-12,1;CL:0000980,1.96e-12,1;CL:0000785,7.61e-07,2;CL:0000955,7.61e-07,2;CL:0000818,7.61e-07,2;CL:0000954,7.61e-07,2;CL:0000816,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.49e-23;2!CL:0000954;8.76e-07;2!UBERON:0006965;8.76e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.18e-12;1!DOID:3493;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.11e-12,1;DOID:3493,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.17e-28!41;UBERON:0001890!1.17e-28!41;UBERON:0006240!1.17e-28!41;UBERON:0003080!8.47e-28!42;UBERON:0001049!8.61e-27!57;UBERON:0005068!8.61e-27!57;UBERON:0006241!8.61e-27!57;UBERON:0007135!8.61e-27!57;UBERON:0002616!1.41e-25!59;UBERON:0002020!4.13e-25!34;UBERON:0003528!4.13e-25!34;UBERON:0000955!4.51e-25!69;UBERON:0006238!4.51e-25!69;UBERON:0001893!4.74e-25!34;UBERON:0001869!9.36e-25!32;UBERON:0002791!1.21e-23!33;UBERON:0001017!7.15e-21!82;UBERON:0007023!1.47e-20!115;UBERON:0005743!1.88e-19!86;UBERON:0003056!8.34e-17!61;UBERON:0000073!1.05e-16!94;UBERON:0001016!1.05e-16!94;UBERON:0002619!1.89e-16!22;UBERON:0000956!5.04e-16!25;UBERON:0000203!5.04e-16!25;UBERON:0003075!7.61e-16!86;UBERON:0007284!7.61e-16!86;UBERON:0002346!9.53e-15!90;UBERON:0001950!2.19e-13!20;UBERON:0000153!7.45e-13!129;UBERON:0007811!7.45e-13!129;UBERON:0000033!7.02e-12!123;UBERON:0002308!4.91e-11!9;UBERON:0000125!4.91e-11!9;UBERON:0000369!4.86e-10!4;UBERON:0002435!4.86e-10!4;UBERON:0000204!4.86e-10!4;UBERON:0010082!4.86e-10!4;UBERON:0002420!1.10e-08!9;UBERON:0007245!1.10e-08!9;UBERON:0010009!1.10e-08!9;UBERON:0010011!1.10e-08!9;UBERON:0000454!1.10e-08!9;UBERON:0000200!1.51e-08!6;UBERON:0009663!3.53e-08!7;UBERON:0005383!5.52e-08!3;UBERON:0005382!5.52e-08!3;UBERON:0000349!2.15e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.38e-44;4!UBERON:0002435;1.38e-44;4!UBERON:0000204;1.38e-44;4!UBERON:0005383;4.30e-34;3!UBERON:0005382;4.30e-34;3!UBERON:0009663;1.16e-25;7!UBERON:0002370;6.37e-24;2!UBERON:0005058;6.37e-24;2!UBERON:0009113;6.37e-24;2!UBERON:0001873;3.49e-23;2!UBERON:0001905;7.63e-23;2!UBERON:0002757;7.63e-23;2!UBERON:0010134;7.63e-23;2!UBERON:0005408;7.63e-23;2!UBERON:0001899;7.63e-23;2!UBERON:0002420;4.86e-20;9!UBERON:0000125;4.86e-20;9!UBERON:0007245;4.86e-20;9!UBERON:0002308;4.86e-20;9!UBERON:0010009;4.86e-20;9!UBERON:0010011;4.86e-20;9!UBERON:0000454;4.86e-20;9!UBERON:0001874;9.91e-13;1!UBERON:0001882;2.60e-12;1!UBERON:0005403;2.60e-12;1!UBERON:0003296;6.37e-12;4!UBERON:0010133;6.37e-12;4!UBERON:0002784;6.37e-12;4!UBERON:0004177;3.80e-10;5!UBERON:0005057;3.80e-10;5!UBERON:0001894;3.45e-07;7!UBERON:0002780;6.08e-07;41!UBERON:0001890;6.08e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,9.36e-45,4;UBERON:0002435,9.36e-45,4;UBERON:0000204,9.36e-45,4;UBERON:0010082,9.36e-45,4;UBERON:0005383,3.07e-34,3;UBERON:0005382,3.07e-34,3;UBERON:0009663,9.28e-26,7;UBERON:0001873,2.49e-23,2;UBERON:0010122,2.49e-23,2;UBERON:0001905,1.66e-22,2;UBERON:0002757,1.66e-22,2;UBERON:0010134,1.66e-22,2;UBERON:0005408,1.66e-22,2;UBERON:0001899,1.66e-22,2;UBERON:0002420,4.10e-20,9;UBERON:0000125,4.10e-20,9;UBERON:0007245,4.10e-20,9;UBERON:0002308,4.10e-20,9;UBERON:0010009,4.10e-20,9;UBERON:0010011,4.10e-20,9;UBERON:0000454,4.10e-20,9;UBERON:0001874,9.92e-13,1;UBERON:0002370,1.86e-12,4;UBERON:0005058,1.86e-12,4;UBERON:0009113,1.86e-12,4;UBERON:0003295,1.86e-12,4;UBERON:0005562,1.86e-12,4;UBERON:0001882,2.46e-12,1;UBERON:0005403,2.46e-12,1;UBERON:0003296,9.37e-12,4;UBERON:0010133,9.37e-12,4;UBERON:0002784,9.37e-12,4;UBERON:0002780,4.21e-09,41;UBERON:0001890,4.21e-09,41;UBERON:0003080,4.21e-09,41;UBERON:0006240,4.21e-09,41;UBERON:0003351,1.34e-08,6;UBERON:0004177,1.72e-07,7;UBERON:0005057,1.72e-07,7;UBERON:0001894,4.29e-07,7;UBERON:0006222,4.29e-07,7;UBERON:0000073,5.47e-07,53;UBERON:0002616,5.47e-07,53 | |||
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| ||
|short_description=p4@CPLX1 | |||
}} | }} |
Latest revision as of 19:40, 18 September 2015
Short description: | p4@CPLX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CPLX1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -148bp_to_ENST00000506404_5end |
EntrezGene: | CPLX1 |
HGNC: | 2309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.06e-15 | 3 |
antibody secreting cell | 1.96e-12 | 1 |
plasma cell | 1.96e-12 | 1 |
plasmablast | 1.96e-12 | 1 |
mature B cell | 7.61e-07 | 2 |
pre-B-II cell | 7.61e-07 | 2 |
transitional stage B cell | 7.61e-07 | 2 |
small pre-B-II cell | 7.61e-07 | 2 |
immature B cell | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.11e-12 | 1 |
signet ring cell adenocarcinoma | 9.54e-07 | 2 |