FFCP PHASE1:Hg19::chr19:47112820..47112840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=808 | |EntrezGene=808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=1449 | |HGNC=1449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_AL050207_5end | |association_with_transcript=-159bp_to_AL050207_5end | ||
|cluster_id=chr19:47112820..47112840,+ | |||
|description=CAGE_peak_21_at_CALM3_5end | |description=CAGE_peak_21_at_CALM3_5end | ||
|id=chr19:47112820..47112840,+ | |id=chr19:47112820..47112840,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.38e-10;3!DOID:127;1.38e-10;3!DOID:0060072;4.90e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.41e-11,3;DOID:127,7.41e-11,3;DOID:0060072,3.09e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.34e-11!32;UBERON:0001893!5.89e-11!34;UBERON:0007023!6.50e-11!115;UBERON:0001049!1.09e-10!57;UBERON:0005068!1.09e-10!57;UBERON:0006241!1.09e-10!57;UBERON:0007135!1.09e-10!57;UBERON:0002020!1.22e-10!34;UBERON:0003528!1.22e-10!34;UBERON:0002791!2.13e-10!33;UBERON:0000956!7.93e-10!25;UBERON:0000203!7.93e-10!25;UBERON:0003080!1.56e-09!42;UBERON:0001017!2.23e-09!82;UBERON:0002780!3.57e-09!41;UBERON:0001890!3.57e-09!41;UBERON:0006240!3.57e-09!41;UBERON:0002616!3.64e-09!59;UBERON:0002619!6.42e-09!22;UBERON:0005743!1.31e-08!86;UBERON:0000955!3.15e-08!69;UBERON:0006238!3.15e-08!69;UBERON:0003075!3.78e-08!86;UBERON:0007284!3.78e-08!86;UBERON:0001950!5.75e-08!20;UBERON:0003056!1.65e-07!61;UBERON:0002346!3.80e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.95e-22;32!UBERON:0001893;7.89e-22;34!UBERON:0002791;1.19e-20;32!UBERON:0003528;1.92e-18;34!UBERON:0002020;1.92e-18;34!UBERON:0000956;3.56e-18;25!UBERON:0000203;3.56e-18;25!UBERON:0002619;8.94e-18;22!UBERON:0001950;1.57e-16;20!UBERON:0002780;4.48e-14;41!UBERON:0001890;4.48e-14;41!UBERON:0000955;1.32e-12;68!UBERON:0000073;1.09e-10;53!UBERON:0002616;1.09e-10;53!UBERON:0001017;2.02e-09;75!UBERON:0000369;4.90e-08;4!UBERON:0002435;4.90e-08;4!UBERON:0000204;4.90e-08;4!UBERON:0001871;9.73e-08;6!UBERON:0001016;6.38e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.87e-25,32;UBERON:0001893,3.25e-23,34;UBERON:0002791,6.21e-22,32;UBERON:0002780,3.92e-21,41;UBERON:0001890,3.92e-21,41;UBERON:0003080,3.92e-21,41;UBERON:0006240,3.92e-21,41;UBERON:0003528,1.91e-20,34;UBERON:0002020,1.91e-20,34;UBERON:0000073,1.56e-19,53;UBERON:0002616,1.56e-19,53;UBERON:0000956,1.02e-18,25;UBERON:0000203,1.02e-18,25;UBERON:0002619,1.71e-18,22;UBERON:0001049,3.13e-18,56;UBERON:0005068,3.13e-18,56;UBERON:0006241,3.13e-18,56;UBERON:0007135,3.13e-18,56;UBERON:0000955,1.80e-17,68;UBERON:0006238,1.80e-17,68;UBERON:0001950,3.61e-17,20;UBERON:0001017,5.54e-17,81;UBERON:0001016,1.02e-14,89;UBERON:0003056,1.97e-14,61;UBERON:0003075,1.40e-13,82;UBERON:0007284,1.40e-13,82;UBERON:0007023,6.75e-13,114;UBERON:0002346,1.06e-12,86;UBERON:0010371,1.31e-09,104;UBERON:0000369,4.14e-08,4;UBERON:0002435,4.14e-08,4;UBERON:0000204,4.14e-08,4;UBERON:0010082,4.14e-08,4;UBERON:0001871,4.86e-08,6;UBERON:0004121,4.69e-07,171;UBERON:0000924,4.69e-07,171;UBERON:0006601,4.69e-07,171;UBERON:0000025,5.67e-07,192;UBERON:0011216,7.79e-07,223;UBERON:0002021,9.84e-07,5 | |||
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| ||
|short_description=p21@CALM3 | |short_description=p21@CALM3 | ||
}} | }} |
Latest revision as of 21:05, 18 September 2015
Short description: | p21@CALM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CALM3_5end |
Coexpression cluster: | NA |
Association with transcript: | -159bp_to_AL050207_5end |
EntrezGene: | CALM3 |
HGNC: | 1449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.41e-11 | 3 |
leiomyoma | 7.41e-11 | 3 |
benign neoplasm | 3.09e-08 | 4 |