FFCP PHASE1:Hg19::chr3:52479112..52479126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56920 | |EntrezGene=56920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30400 | |HGNC=30400 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXB2 | |UniProt=C9JXB2 | ||
|association_with_transcript=-11bp_to_ENST00000475739_5end | |association_with_transcript=-11bp_to_ENST00000475739_5end | ||
|cluster_id=chr3:52479112..52479126,- | |||
|coexpression_cluster_id=C2744 | |coexpression_cluster_id=C2744 | ||
|description=CAGE_peak_1_at_SEMA3G_5end | |description=CAGE_peak_1_at_SEMA3G_5end | ||
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|ontology_enrichment_celltype=CL:0002139!8.86e-11!24;CL:0000115!5.09e-09!35;CL:0000071!1.70e-08!18;CL:0002546!1.70e-08!18 | |ontology_enrichment_celltype=CL:0002139!8.86e-11!24;CL:0000115!5.09e-09!35;CL:0000071!1.70e-08!18;CL:0002546!1.70e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.03e-12;24!CL:0000071;2.90e-10;18!CL:0000115;2.02e-09;36!CL:0000136;5.68e-09;13 | |ontology_enrichment_celltype_v019=CL:0002139;2.03e-12;24!CL:0000071;2.90e-10;18!CL:0000115;2.02e-09;36!CL:0000136;5.68e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.91e-12,24;CL:0000115,8.35e-11,36;CL:0000071,3.08e-10,18;CL:0002546,3.08e-10,18;CL:0000136,3.72e-07,15;CL:0002078,5.14e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.90e-10;18!UBERON:0006601;8.95e-09;82 | |ontology_enrichment_development_v019=CL:0002546;2.90e-10;18!UBERON:0006601;8.95e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.18e-46!115;UBERON:0001049!2.85e-18!57;UBERON:0005068!2.85e-18!57;UBERON:0006241!2.85e-18!57;UBERON:0007135!2.85e-18!57;UBERON:0001017!1.05e-14!82;UBERON:0003080!1.16e-14!42;UBERON:0002780!5.56e-14!41;UBERON:0001890!5.56e-14!41;UBERON:0006240!5.56e-14!41;UBERON:0005743!9.05e-14!86;UBERON:0000955!1.26e-13!69;UBERON:0006238!1.26e-13!69;UBERON:0002616!1.32e-13!59;UBERON:0000073!1.33e-12!94;UBERON:0001016!1.33e-12!94;UBERON:0004111!2.07e-11!241;UBERON:0001893!2.16e-11!34;UBERON:0002020!2.50e-11!34;UBERON:0003528!2.50e-11!34;UBERON:0002791!6.10e-11!33;UBERON:0001869!1.27e-10!32;UBERON:0003075!1.86e-10!86;UBERON:0007284!1.86e-10!86;UBERON:0002346!2.36e-10!90;UBERON:0000025!4.86e-10!194;UBERON:0002619!1.19e-09!22;UBERON:0001950!6.74e-09!20;UBERON:0000477!8.10e-09!286;UBERON:0001986!1.70e-08!18;UBERON:0004638!1.70e-08!18;UBERON:0004852!1.70e-08!18;UBERON:0000956!7.13e-08!25;UBERON:0000203!7.13e-08!25;UBERON:0000487!3.16e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!6.18e-46!115;UBERON:0001049!2.85e-18!57;UBERON:0005068!2.85e-18!57;UBERON:0006241!2.85e-18!57;UBERON:0007135!2.85e-18!57;UBERON:0001017!1.05e-14!82;UBERON:0003080!1.16e-14!42;UBERON:0002780!5.56e-14!41;UBERON:0001890!5.56e-14!41;UBERON:0006240!5.56e-14!41;UBERON:0005743!9.05e-14!86;UBERON:0000955!1.26e-13!69;UBERON:0006238!1.26e-13!69;UBERON:0002616!1.32e-13!59;UBERON:0000073!1.33e-12!94;UBERON:0001016!1.33e-12!94;UBERON:0004111!2.07e-11!241;UBERON:0001893!2.16e-11!34;UBERON:0002020!2.50e-11!34;UBERON:0003528!2.50e-11!34;UBERON:0002791!6.10e-11!33;UBERON:0001869!1.27e-10!32;UBERON:0003075!1.86e-10!86;UBERON:0007284!1.86e-10!86;UBERON:0002346!2.36e-10!90;UBERON:0000025!4.86e-10!194;UBERON:0002619!1.19e-09!22;UBERON:0001950!6.74e-09!20;UBERON:0000477!8.10e-09!286;UBERON:0001986!1.70e-08!18;UBERON:0004638!1.70e-08!18;UBERON:0004852!1.70e-08!18;UBERON:0000956!7.13e-08!25;UBERON:0000203!7.13e-08!25;UBERON:0000487!3.16e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.03e-16;114!UBERON:0002780;7.33e-14;41!UBERON:0001890;7.33e-14;41!UBERON:0000073;3.57e-13;53!UBERON:0002616;3.57e-13;53!UBERON:0001893;4.37e-13;34!UBERON:0003528;5.39e-13;34!UBERON:0002020;5.39e-13;34!UBERON:0001869;6.78e-13;32!UBERON:0002619;8.52e-13;22!UBERON:0002791;9.68e-13;32!UBERON:0001950;1.01e-11;20!UBERON:0000956;1.73e-10;25!UBERON:0000203;1.73e-10;25!UBERON:0004638;2.90e-10;18!UBERON:0001986;2.90e-10;18!UBERON:0004852;2.90e-10;18!UBERON:0001017;1.97e-09;75!UBERON:0000955;6.66e-09;68!UBERON:0001016;6.66e-08;83!UBERON:0000487;1.90e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0007023;5.03e-16;114!UBERON:0002780;7.33e-14;41!UBERON:0001890;7.33e-14;41!UBERON:0000073;3.57e-13;53!UBERON:0002616;3.57e-13;53!UBERON:0001893;4.37e-13;34!UBERON:0003528;5.39e-13;34!UBERON:0002020;5.39e-13;34!UBERON:0001869;6.78e-13;32!UBERON:0002619;8.52e-13;22!UBERON:0002791;9.68e-13;32!UBERON:0001950;1.01e-11;20!UBERON:0000956;1.73e-10;25!UBERON:0000203;1.73e-10;25!UBERON:0004638;2.90e-10;18!UBERON:0001986;2.90e-10;18!UBERON:0004852;2.90e-10;18!UBERON:0001017;1.97e-09;75!UBERON:0000955;6.66e-09;68!UBERON:0001016;6.66e-08;83!UBERON:0000487;1.90e-07;22 | ||
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| ||
|short_description=p1@SEMA3G | |short_description=p1@SEMA3G | ||
}} | }} |
Latest revision as of 23:49, 18 September 2015
Short description: | p1@SEMA3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA3G_5end |
Coexpression cluster: | C2744_breast_Renal_mature_adipose_lung_Endothelial_heart |
Association with transcript: | -11bp_to_ENST00000475739_5end |
EntrezGene: | SEMA3G |
HGNC: | 30400 |
UniProt: | C9JXB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.91e-12 | 24 |
endothelial cell | 8.35e-11 | 36 |
blood vessel endothelial cell | 3.08e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.08e-10 | 18 |
fat cell | 3.72e-07 | 15 |
meso-epithelial cell | 5.14e-07 | 45 |