FFCP PHASE1:Hg19::chr4:83350555..83350566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9987 | |EntrezGene=9987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5037 | |HGNC=5037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000514511_5end | |association_with_transcript=11bp_to_ENST00000514511_5end | ||
|cluster_id=chr4:83350555..83350566,- | |||
|description=CAGE_peak_2_at_HNRPDL_5end | |description=CAGE_peak_2_at_HNRPDL_5end | ||
|id=chr4:83350555..83350566,- | |id=chr4:83350555..83350566,- | ||
|ontology_enrichment_celltype=CL:0000838!1.32e-09!52;CL:0000542!1.34e-09!53;CL:0000051!1.34e-09!53;CL:0000791!5.37e-07!18;CL:0000789!5.37e-07!18;CL:0002420!5.37e-07!18;CL:0002419!5.37e-07!18;CL:0000790!5.37e-07!18;CL:0000084!5.86e-07!25;CL:0000827!5.86e-07!25 | |ontology_enrichment_celltype=CL:0000838!1.32e-09!52;CL:0000542!1.34e-09!53;CL:0000051!1.34e-09!53;CL:0000791!5.37e-07!18;CL:0000789!5.37e-07!18;CL:0002420!5.37e-07!18;CL:0002419!5.37e-07!18;CL:0000790!5.37e-07!18;CL:0000084!5.86e-07!25;CL:0000827!5.86e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.78e-07;18!CL:0000789;4.78e-07;18!CL:0002419;4.78e-07;18!CL:0000084;5.53e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.32e-09,52;CL:0000542,1.34e-09,53;CL:0000051,1.34e-09,53;CL:0000791,5.37e-07,18;CL:0000789,5.37e-07,18;CL:0002420,5.37e-07,18;CL:0002419,5.37e-07,18;CL:0000790,5.37e-07,18;CL:0000084,5.86e-07,25;CL:0000827,5.86e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.78e-07;18 | |||
|ontology_enrichment_disease=DOID:162!7.42e-08!235;DOID:14566!4.86e-07!239;DOID:2531!7.10e-07!51;DOID:0060083!7.10e-07!51;DOID:1240!7.16e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.42e-08,235;DOID:14566,4.86e-07,239;DOID:2531,7.10e-07,51;DOID:0060083,7.10e-07,51;DOID:1240,7.16e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.46e-16!82;UBERON:0000073!8.04e-16!94;UBERON:0001016!8.04e-16!94;UBERON:0005743!3.36e-15!86;UBERON:0002780!4.49e-14!41;UBERON:0001890!4.49e-14!41;UBERON:0006240!4.49e-14!41;UBERON:0001049!2.86e-13!57;UBERON:0005068!2.86e-13!57;UBERON:0006241!2.86e-13!57;UBERON:0007135!2.86e-13!57;UBERON:0003080!3.47e-13!42;UBERON:0002020!4.04e-13!34;UBERON:0003528!4.04e-13!34;UBERON:0001893!1.88e-12!34;UBERON:0002791!2.49e-12!33;UBERON:0001869!3.61e-12!32;UBERON:0000955!8.05e-12!69;UBERON:0006238!8.05e-12!69;UBERON:0002616!2.66e-10!59;UBERON:0000956!1.52e-09!25;UBERON:0000203!1.52e-09!25;UBERON:0002346!9.89e-09!90;UBERON:0002619!1.81e-08!22;UBERON:0003075!2.36e-08!86;UBERON:0007284!2.36e-08!86;UBERON:0001950!6.73e-08!20;UBERON:0003056!1.12e-07!61;UBERON:0000924!6.28e-07!173;UBERON:0006601!6.28e-07!173 | |ontology_enrichment_uberon=UBERON:0001017!1.46e-16!82;UBERON:0000073!8.04e-16!94;UBERON:0001016!8.04e-16!94;UBERON:0005743!3.36e-15!86;UBERON:0002780!4.49e-14!41;UBERON:0001890!4.49e-14!41;UBERON:0006240!4.49e-14!41;UBERON:0001049!2.86e-13!57;UBERON:0005068!2.86e-13!57;UBERON:0006241!2.86e-13!57;UBERON:0007135!2.86e-13!57;UBERON:0003080!3.47e-13!42;UBERON:0002020!4.04e-13!34;UBERON:0003528!4.04e-13!34;UBERON:0001893!1.88e-12!34;UBERON:0002791!2.49e-12!33;UBERON:0001869!3.61e-12!32;UBERON:0000955!8.05e-12!69;UBERON:0006238!8.05e-12!69;UBERON:0002616!2.66e-10!59;UBERON:0000956!1.52e-09!25;UBERON:0000203!1.52e-09!25;UBERON:0002346!9.89e-09!90;UBERON:0002619!1.81e-08!22;UBERON:0003075!2.36e-08!86;UBERON:0007284!2.36e-08!86;UBERON:0001950!6.73e-08!20;UBERON:0003056!1.12e-07!61;UBERON:0000924!6.28e-07!173;UBERON:0006601!6.28e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.54e-11;32!UBERON:0003528;1.92e-11;34!UBERON:0002020;1.92e-11;34!UBERON:0001869;2.55e-11;32!UBERON:0001893;7.16e-11;34!UBERON:0002780;2.31e-10;41!UBERON:0001890;2.31e-10;41!UBERON:0000956;1.44e-09;25!UBERON:0000203;1.44e-09;25!UBERON:0002619;1.79e-08;22!UBERON:0000073;3.57e-08;53!UBERON:0002616;3.57e-08;53!UBERON:0001950;6.69e-08;20!UBERON:0001016;1.95e-07;83!UBERON:0001017;8.72e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.02e-18,89;UBERON:0001017,3.09e-17,81;UBERON:0002780,4.49e-14,41;UBERON:0001890,4.49e-14,41;UBERON:0003080,4.49e-14,41;UBERON:0006240,4.49e-14,41;UBERON:0001049,5.28e-14,56;UBERON:0005068,5.28e-14,56;UBERON:0006241,5.28e-14,56;UBERON:0007135,5.28e-14,56;UBERON:0000073,3.44e-13,53;UBERON:0002616,3.44e-13,53;UBERON:0003528,4.04e-13,34;UBERON:0002020,4.04e-13,34;UBERON:0002791,1.81e-12,32;UBERON:0001893,1.88e-12,34;UBERON:0000955,2.04e-12,68;UBERON:0006238,2.04e-12,68;UBERON:0001869,3.61e-12,32;UBERON:0002346,6.08e-10,86;UBERON:0003075,1.46e-09,82;UBERON:0007284,1.46e-09,82;UBERON:0000956,1.52e-09,25;UBERON:0000203,1.52e-09,25;UBERON:0003056,1.36e-08,61;UBERON:0002619,1.81e-08,22;UBERON:0001950,6.73e-08,20;UBERON:0004121,3.25e-07,171;UBERON:0000924,3.25e-07,171;UBERON:0006601,3.25e-07,171 | |||
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382519 | ||
|short_description=p2@HNRPDL | |short_description=p2@HNRPDL | ||
}} | }} |
Latest revision as of 00:40, 19 September 2015
Short description: | p2@HNRPDL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNRPDL_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000514511_5end |
EntrezGene: | HNRPDL |
HGNC: | 5037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.32e-09 | 52 |
lymphocyte | 1.34e-09 | 53 |
common lymphoid progenitor | 1.34e-09 | 53 |
mature alpha-beta T cell | 5.37e-07 | 18 |
alpha-beta T cell | 5.37e-07 | 18 |
immature T cell | 5.37e-07 | 18 |
mature T cell | 5.37e-07 | 18 |
immature alpha-beta T cell | 5.37e-07 | 18 |
T cell | 5.86e-07 | 25 |
pro-T cell | 5.86e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.02e-18 | 89 |
central nervous system | 3.09e-17 | 81 |
regional part of forebrain | 4.49e-14 | 41 |
forebrain | 4.49e-14 | 41 |
anterior neural tube | 4.49e-14 | 41 |
future forebrain | 4.49e-14 | 41 |
neural tube | 5.28e-14 | 56 |
neural rod | 5.28e-14 | 56 |
future spinal cord | 5.28e-14 | 56 |
neural keel | 5.28e-14 | 56 |
regional part of nervous system | 3.44e-13 | 53 |
regional part of brain | 3.44e-13 | 53 |
brain grey matter | 4.04e-13 | 34 |
gray matter | 4.04e-13 | 34 |
regional part of telencephalon | 1.81e-12 | 32 |
telencephalon | 1.88e-12 | 34 |
brain | 2.04e-12 | 68 |
future brain | 2.04e-12 | 68 |
cerebral hemisphere | 3.61e-12 | 32 |
neurectoderm | 6.08e-10 | 86 |
neural plate | 1.46e-09 | 82 |
presumptive neural plate | 1.46e-09 | 82 |
cerebral cortex | 1.52e-09 | 25 |
pallium | 1.52e-09 | 25 |
pre-chordal neural plate | 1.36e-08 | 61 |
regional part of cerebral cortex | 1.81e-08 | 22 |
neocortex | 6.73e-08 | 20 |
ectoderm-derived structure | 3.25e-07 | 171 |
ectoderm | 3.25e-07 | 171 |
presumptive ectoderm | 3.25e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.42e-08 | 235 |
disease of cellular proliferation | 4.86e-07 | 239 |
hematologic cancer | 7.10e-07 | 51 |
immune system cancer | 7.10e-07 | 51 |
leukemia | 7.16e-07 | 39 |