FFCP PHASE1:Hg19::chr12:54812962..54812973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3678 | |EntrezGene=3678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6141 | |HGNC=6141 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000553071_5end | |association_with_transcript=-51bp_to_ENST00000553071_5end | ||
|cluster_id=chr12:54812962..54812973,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_5_at_ITGA5_5end | |description=CAGE_peak_5_at_ITGA5_5end | ||
|id=chr12:54812962..54812973,- | |id=chr12:54812962..54812973,- | ||
|ontology_enrichment_celltype=CL:0000048!2.37e-19!430;CL:0000723!1.17e-18!436;CL:0000034!1.39e-18!444;CL:0002371!2.88e-18!591;CL:0000222!3.88e-18!119;CL:0000144!1.25e-17!625;CL:0002057!4.22e-17!42;CL:0000860!7.30e-16!45;CL:0002139!1.09e-13!24;CL:0000115!2.68e-12!35;CL:0000055!4.41e-12!180;CL:0000071!2.93e-11!18;CL:0002546!2.93e-11!18;CL:0002194!1.23e-10!63;CL:0000576!1.23e-10!63;CL:0000040!1.23e-10!63;CL:0000559!1.23e-10!63;CL:0002009!1.83e-10!65;CL:0002320!3.17e-10!365;CL:0000766!5.26e-10!76;CL:0002078!5.27e-10!44;CL:0000680!6.75e-10!57;CL:0000056!6.75e-10!57;CL:0000355!6.75e-10!57;CL:0000183!1.70e-09!59;CL:0000557!1.80e-09!71;CL:0000134!1.93e-09!358;CL:0000187!7.26e-09!54;CL:0000839!1.74e-08!70;CL:0000012!2.00e-08!682;CL:0000213!2.32e-08!57;CL:0000215!2.32e-08!57;CL:0000057!2.64e-08!75;CL:0000548!6.63e-08!679;CL:0000004!6.63e-08!679;CL:0000255!6.63e-08!679;CL:0000192!9.66e-08!42;CL:0000514!9.66e-08!42;CL:0000393!1.47e-07!60;CL:0000211!1.47e-07!60;CL:1000413!5.41e-07!9 | |ontology_enrichment_celltype=CL:0000048!2.37e-19!430;CL:0000723!1.17e-18!436;CL:0000034!1.39e-18!444;CL:0002371!2.88e-18!591;CL:0000222!3.88e-18!119;CL:0000144!1.25e-17!625;CL:0002057!4.22e-17!42;CL:0000860!7.30e-16!45;CL:0002139!1.09e-13!24;CL:0000115!2.68e-12!35;CL:0000055!4.41e-12!180;CL:0000071!2.93e-11!18;CL:0002546!2.93e-11!18;CL:0002194!1.23e-10!63;CL:0000576!1.23e-10!63;CL:0000040!1.23e-10!63;CL:0000559!1.23e-10!63;CL:0002009!1.83e-10!65;CL:0002320!3.17e-10!365;CL:0000766!5.26e-10!76;CL:0002078!5.27e-10!44;CL:0000680!6.75e-10!57;CL:0000056!6.75e-10!57;CL:0000355!6.75e-10!57;CL:0000183!1.70e-09!59;CL:0000557!1.80e-09!71;CL:0000134!1.93e-09!358;CL:0000187!7.26e-09!54;CL:0000839!1.74e-08!70;CL:0000012!2.00e-08!682;CL:0000213!2.32e-08!57;CL:0000215!2.32e-08!57;CL:0000057!2.64e-08!75;CL:0000548!6.63e-08!679;CL:0000004!6.63e-08!679;CL:0000255!6.63e-08!679;CL:0000192!9.66e-08!42;CL:0000514!9.66e-08!42;CL:0000393!1.47e-07!60;CL:0000211!1.47e-07!60;CL:1000413!5.41e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-24;33!CL:0002057;1.36e-24;33!CL:0002139;6.13e-19;24!CL:0000473;1.05e-16;39!CL:0000234;1.05e-16;39!CL:0000115;1.45e-15;36!CL:0000071;2.61e-15;18!CL:0000576;6.46e-12;48!CL:1000413;1.51e-09;9!CL:0002078;7.11e-09;45!CL:0000766;1.96e-07;69!CL:0000213;2.39e-07;58!CL:0000215;2.39e-07;58!CL:0002544;7.19e-07;6!CL:0000359;7.25e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.50e-23,42;CL:0002057,5.50e-23,42;CL:0000222,1.00e-19,121;CL:0000048,1.55e-19,427;CL:0000473,2.47e-19,48;CL:0000234,2.47e-19,48;CL:0002139,2.86e-19,24;CL:0000723,5.73e-19,433;CL:0000034,1.19e-18,441;CL:0000115,2.42e-18,36;CL:0000071,1.02e-15,18;CL:0002546,1.02e-15,18;CL:0002194,1.94e-14,59;CL:0000576,1.94e-14,59;CL:0000040,1.94e-14,59;CL:0000559,1.94e-14,59;CL:0002009,1.63e-13,61;CL:0000766,1.94e-13,72;CL:0002078,2.73e-13,45;CL:0000557,9.75e-12,67;CL:0000839,1.77e-11,66;CL:0000213,6.80e-11,58;CL:0000215,6.80e-11,58;CL:0002320,2.69e-10,361;CL:0000680,8.32e-10,58;CL:0000056,8.32e-10,58;CL:0000355,8.32e-10,58;CL:1000413,1.68e-09,9;CL:0000134,2.63e-09,354;CL:0000187,1.71e-08,55;CL:0000763,1.67e-07,108;CL:0000049,1.67e-07,108;CL:0000192,2.51e-07,43;CL:0000514,2.51e-07,43;CL:0000359,3.46e-07,32;CL:0002544,7.79e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-17;42!CL:0002546;2.61e-15;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.54e-20!216;UBERON:0002049!1.52e-19!79;UBERON:0007798!1.52e-19!79;UBERON:0000055!6.63e-19!69;UBERON:0001981!9.66e-17!60;UBERON:0007500!9.66e-17!60;UBERON:0004537!9.66e-17!60;UBERON:0006965!9.66e-17!60;UBERON:0004535!3.50e-16!110;UBERON:0001009!1.84e-15!113;UBERON:0002204!1.12e-14!167;UBERON:0004872!1.33e-13!84;UBERON:0001637!4.16e-12!42;UBERON:0003509!4.16e-12!42;UBERON:0004572!4.16e-12!42;UBERON:0001986!2.93e-11!18;UBERON:0004638!2.93e-11!18;UBERON:0004852!2.93e-11!18;UBERON:0004290!9.46e-11!70;UBERON:0003914!1.67e-10!118;UBERON:0002384!3.71e-10!375;UBERON:0000914!4.26e-10!83;UBERON:0002329!4.26e-10!83;UBERON:0003077!4.26e-10!83;UBERON:0003059!4.26e-10!83;UBERON:0007282!4.26e-10!83;UBERON:0009618!4.26e-10!83;UBERON:0007285!4.26e-10!83;UBERON:0000926!7.87e-10!448;UBERON:0004120!7.87e-10!448;UBERON:0006603!7.87e-10!448;UBERON:0002371!1.43e-09!80;UBERON:0002405!5.97e-09!115;UBERON:0000486!7.40e-09!82;UBERON:0004573!8.10e-09!33;UBERON:0004571!8.10e-09!33;UBERON:0000487!9.67e-09!22;UBERON:0002385!1.00e-08!63;UBERON:0001015!1.00e-08!63;UBERON:0000383!1.00e-08!63;UBERON:0000490!1.13e-08!138;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0002193!7.65e-08!112;UBERON:0005256!9.04e-08!143;UBERON:0001474!2.43e-07!86;UBERON:0006914!4.21e-07!25;UBERON:0003915!5.41e-07!9;UBERON:0004700!5.41e-07!9;UBERON:0001917!5.41e-07!9;UBERON:0004765!6.23e-07!101;UBERON:0001434!6.23e-07!101 | |ontology_enrichment_uberon=UBERON:0003081!2.54e-20!216;UBERON:0002049!1.52e-19!79;UBERON:0007798!1.52e-19!79;UBERON:0000055!6.63e-19!69;UBERON:0001981!9.66e-17!60;UBERON:0007500!9.66e-17!60;UBERON:0004537!9.66e-17!60;UBERON:0006965!9.66e-17!60;UBERON:0004535!3.50e-16!110;UBERON:0001009!1.84e-15!113;UBERON:0002204!1.12e-14!167;UBERON:0004872!1.33e-13!84;UBERON:0001637!4.16e-12!42;UBERON:0003509!4.16e-12!42;UBERON:0004572!4.16e-12!42;UBERON:0001986!2.93e-11!18;UBERON:0004638!2.93e-11!18;UBERON:0004852!2.93e-11!18;UBERON:0004290!9.46e-11!70;UBERON:0003914!1.67e-10!118;UBERON:0002384!3.71e-10!375;UBERON:0000914!4.26e-10!83;UBERON:0002329!4.26e-10!83;UBERON:0003077!4.26e-10!83;UBERON:0003059!4.26e-10!83;UBERON:0007282!4.26e-10!83;UBERON:0009618!4.26e-10!83;UBERON:0007285!4.26e-10!83;UBERON:0000926!7.87e-10!448;UBERON:0004120!7.87e-10!448;UBERON:0006603!7.87e-10!448;UBERON:0002371!1.43e-09!80;UBERON:0002405!5.97e-09!115;UBERON:0000486!7.40e-09!82;UBERON:0004573!8.10e-09!33;UBERON:0004571!8.10e-09!33;UBERON:0000487!9.67e-09!22;UBERON:0002385!1.00e-08!63;UBERON:0001015!1.00e-08!63;UBERON:0000383!1.00e-08!63;UBERON:0000490!1.13e-08!138;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0002193!7.65e-08!112;UBERON:0005256!9.04e-08!143;UBERON:0001474!2.43e-07!86;UBERON:0006914!4.21e-07!25;UBERON:0003915!5.41e-07!9;UBERON:0004700!5.41e-07!9;UBERON:0001917!5.41e-07!9;UBERON:0004765!6.23e-07!101;UBERON:0001434!6.23e-07!101 | ||
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| ||
|short_description=p5@ITGA5 | |short_description=p5@ITGA5 | ||
}} | }} |
Latest revision as of 06:28, 19 September 2015
Short description: | p5@ITGA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITGA5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -51bp_to_ENST00000553071_5end |
EntrezGene: | ITGA5 |
HGNC: | 6141 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data