FFCP PHASE1:Hg19::chr2:202222054..202222084,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130540 | |EntrezGene=130540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14439 | |HGNC=14439 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000494171_5end | |association_with_transcript=0bp_to_ENST00000494171_5end | ||
|cluster_id=chr2:202222054..202222084,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_ALS2CR12_5end | |description=CAGE_peak_1_at_ALS2CR12_5end | ||
|id=chr2:202222054..202222084,- | |id=chr2:202222054..202222084,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.60e-12;5!CL:0000163;4.79e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.93e-12,5;CL:0002028,2.93e-12,5;CL:0000163,5.11e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.44e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.66e-37!115;UBERON:0001049!6.00e-19!57;UBERON:0005068!6.00e-19!57;UBERON:0006241!6.00e-19!57;UBERON:0007135!6.00e-19!57;UBERON:0005743!9.45e-18!86;UBERON:0003075!3.32e-17!86;UBERON:0007284!3.32e-17!86;UBERON:0001017!9.19e-17!82;UBERON:0002346!5.58e-16!90;UBERON:0000073!4.26e-15!94;UBERON:0001016!4.26e-15!94;UBERON:0002616!6.24e-14!59;UBERON:0000955!1.16e-13!69;UBERON:0006238!1.16e-13!69;UBERON:0002780!2.44e-12!41;UBERON:0001890!2.44e-12!41;UBERON:0006240!2.44e-12!41;UBERON:0003080!6.42e-12!42;UBERON:0003056!3.12e-09!61;UBERON:0001894!7.45e-09!7;UBERON:0006222!7.45e-09!7;UBERON:0003076!9.42e-09!15;UBERON:0003057!9.42e-09!15;UBERON:0002298!1.27e-08!8;UBERON:0000369!5.81e-08!4;UBERON:0002435!5.81e-08!4;UBERON:0000204!5.81e-08!4;UBERON:0010082!5.81e-08!4;UBERON:0000153!6.89e-08!129;UBERON:0007811!6.89e-08!129;UBERON:0000025!7.45e-08!194;UBERON:0004121!1.86e-07!169;UBERON:0002020!2.01e-07!34;UBERON:0003528!2.01e-07!34;UBERON:0002308!2.36e-07!9;UBERON:0000125!2.36e-07!9;UBERON:0000033!3.14e-07!123;UBERON:0001893!3.47e-07!34;UBERON:0001896!4.29e-07!3;UBERON:0005290!4.29e-07!3;UBERON:0010096!4.29e-07!3;UBERON:0000924!4.65e-07!173;UBERON:0006601!4.65e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.33e-27;6!UBERON:0001896;1.75e-20;3!UBERON:0005290;1.75e-20;3!UBERON:0000125;7.50e-18;9!UBERON:0002308;7.50e-18;9!UBERON:0000369;4.95e-15;4!UBERON:0002435;4.95e-15;4!UBERON:0000204;4.95e-15;4!UBERON:0002148;3.66e-14;2!UBERON:0006331;3.66e-14;2!UBERON:0009662;3.66e-14;2!UBERON:0003127;4.77e-14;2!UBERON:0001873;5.44e-14;2!UBERON:0000341;6.00e-14;2!UBERON:0004733;1.32e-13;12!UBERON:0002028;1.32e-13;12!UBERON:0004732;1.52e-12;13!UBERON:0000988;9.71e-10;3!UBERON:0005383;1.26e-09;3!UBERON:0005382;1.26e-09;3!UBERON:0009663;8.26e-09;7!UBERON:0001301;3.32e-08;1!UBERON:0002336;5.33e-08;1!UBERON:0011215;5.33e-08;1!UBERON:0001018;5.33e-08;1!UBERON:0002473;5.33e-08;1!UBERON:0005340;5.33e-08;1!UBERON:0003544;5.33e-08;1!UBERON:0005970;5.33e-08;1!UBERON:0002316;5.33e-08;1!UBERON:0001020;5.33e-08;1!UBERON:0002437;5.33e-08;1!UBERON:0002171;7.45e-08;1!UBERON:0006518;7.45e-08;1!UBERON:0008949;7.45e-08;1!UBERON:0000101;7.45e-08;1!UBERON:0002167;7.45e-08;1!UBERON:0000073;1.37e-07;53!UBERON:0002616;1.37e-07;53!UBERON:0001882;1.39e-07;1!UBERON:0002135;1.39e-07;1!UBERON:0005403;1.39e-07;1!UBERON:0002420;5.97e-07;9!UBERON:0007245;5.97e-07;9!UBERON:0010009;5.97e-07;9!UBERON:0010011;5.97e-07;9!UBERON:0000454;5.97e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.78e-27,6;UBERON:0001896,1.35e-20,3;UBERON:0005290,1.35e-20,3;UBERON:0010096,1.35e-20,3;UBERON:0000125,7.92e-18,9;UBERON:0002308,7.92e-18,9;UBERON:0007023,6.77e-17,114;UBERON:0003076,3.05e-15,15;UBERON:0003057,3.05e-15,15;UBERON:0000369,5.59e-15,4;UBERON:0002435,5.59e-15,4;UBERON:0000204,5.59e-15,4;UBERON:0010082,5.59e-15,4;UBERON:0003127,3.21e-14,2;UBERON:0002148,3.43e-14,2;UBERON:0006331,3.43e-14,2;UBERON:0009662,3.43e-14,2;UBERON:0000341,4.47e-14,2;UBERON:0001873,6.62e-14,2;UBERON:0010122,6.62e-14,2;UBERON:0004733,1.15e-13,12;UBERON:0002028,1.15e-13,12;UBERON:0007277,1.15e-13,12;UBERON:0004732,1.35e-12,13;UBERON:0001049,9.40e-12,56;UBERON:0005068,9.40e-12,56;UBERON:0006241,9.40e-12,56;UBERON:0007135,9.40e-12,56;UBERON:0000073,2.47e-10,53;UBERON:0002616,2.47e-10,53;UBERON:0000988,9.30e-10,3;UBERON:0005383,1.44e-09,3;UBERON:0005382,1.44e-09,3;UBERON:0003075,6.25e-09,82;UBERON:0007284,6.25e-09,82;UBERON:0009663,8.84e-09,7;UBERON:0002346,2.03e-08,86;UBERON:0001301,3.32e-08,1;UBERON:0002336,4.99e-08,1;UBERON:0011215,4.99e-08,1;UBERON:0001018,4.99e-08,1;UBERON:0002473,4.99e-08,1;UBERON:0005340,4.99e-08,1;UBERON:0003544,4.99e-08,1;UBERON:0005970,4.99e-08,1;UBERON:0002316,4.99e-08,1;UBERON:0001020,4.99e-08,1;UBERON:0002437,4.99e-08,1;UBERON:0002171,9.10e-08,1;UBERON:0006518,9.10e-08,1;UBERON:0008949,9.10e-08,1;UBERON:0000101,9.10e-08,1;UBERON:0002167,9.10e-08,1;UBERON:0001882,1.35e-07,1;UBERON:0005403,1.35e-07,1;UBERON:0000955,1.38e-07,68;UBERON:0006238,1.38e-07,68;UBERON:0001017,1.84e-07,81;UBERON:0002135,1.87e-07,1;UBERON:0002420,6.28e-07,9;UBERON:0007245,6.28e-07,9;UBERON:0010009,6.28e-07,9;UBERON:0010011,6.28e-07,9;UBERON:0000454,6.28e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530119073285941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,2.28060927094849,2.16179930125442,2.39860623510122,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0,6.20018970069687,1.20596438625408,0,0,0,0.658156191461918,0,0,0.384751292518985,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,3.70706231393724,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38688007561745,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.916641696046735,0.717873024576814,0.599037001496973,0.429226048136571,0.89268582976749,0.268733889946905,0,0,0,0,0,0,0,0,0.681017030557878,0.964518890790115,0.412618309791701,0,0,0,0.182248669974074,0,0.157611414598396,0.367182116944987,0,0.35857467866569,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,1.32506888912221,3.49063982176186,2.6446520348538,0,0,2.45611048905698,18.8645166119599,2.07119527673598,0,0,0,0,1.63205341010842,0.2506898940227,0,0.327872630709804,0.157054096250234,0.886068179966986,0,0.1251909307065,10.8947747181114,6.54481404067428,1.73869928235874,0.138348634936231,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,0,0,0.41023272848151,0,0,0.807378228159255,0,0,0,0,0,0,0,0,2.70757182057326,0,0,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.455324382702595,0.443511850813194,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0.549702583727146,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.2679671827502,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0,7.57786982182394,11.2544934665595,1.65833887891756,0.517164979309476,4.05144565611864,1.90451545170992,0,0,0,0,0.606351566874658,0,0,0.134704106029175,7.67427597701637,1.99596213927608,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530119073285941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,2.28060927094849,2.16179930125442,2.39860623510122,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0,6.20018970069687,1.20596438625408,0,0,0,0.658156191461918,0,0,0.384751292518985,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,3.70706231393724,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38688007561745,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.916641696046735,0.717873024576814,0.599037001496973,0.429226048136571,0.89268582976749,0.268733889946905,0,0,0,0,0,0,0,0,0.681017030557878,0.964518890790115,0.412618309791701,0,0,0,0.182248669974074,0,0.157611414598396,0.367182116944987,0,0.35857467866569,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,1.32506888912221,3.49063982176186,2.6446520348538,0,0,2.45611048905698,18.8645166119599,2.07119527673598,0,0,0,0,1.63205341010842,0.2506898940227,0,0.327872630709804,0.157054096250234,0.886068179966986,0,0.1251909307065,10.8947747181114,6.54481404067428,1.73869928235874,0.138348634936231,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,0,0,0.41023272848151,0,0,0.807378228159255,0,0,0,0,0,0,0,0,2.70757182057326,0,0,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.455324382702595,0.443511850813194,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0.549702583727146,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.2679671827502,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0,7.57786982182394,11.2544934665595,1.65833887891756,0.517164979309476,4.05144565611864,1.90451545170992,0,0,0,0,0.606351566874658,0,0,0.134704106029175,7.67427597701637,1.99596213927608,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p1@ALS2CR12 | |short_description=p1@ALS2CR12 | ||
}} | }} |
Latest revision as of 13:09, 19 September 2015
Short description: | p1@ALS2CR12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALS2CR12_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000494171_5end |
EntrezGene: | ALS2CR12 |
HGNC: | 14439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.93e-12 | 5 |
basophil mast progenitor cell | 2.93e-12 | 5 |
endocrine cell | 5.11e-07 | 9 |