FFCP PHASE1:Hg19::chr1:86044170..86044182,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:86044170..86044182,- to FFCP PHASE1:Hg19::chr1:86044170..86044182,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23576 | |EntrezGene=23576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2715 | |HGNC=2715 | ||
|TSSclassifier=strong | |||
|UniProt=Q5HYC8,B4E3V1 | |UniProt=Q5HYC8,B4E3V1 | ||
|association_with_transcript=-124bp_to_ENST00000535924,NM_001134445,uc001dlc.2_5end | |||
|cluster_id=chr1:86044170..86044182,- | |||
|coexpression_cluster_id=C4001 | |||
|description=CAGE_peak_12_at_DDAH1_5end | |||
|id=chr1:86044170..86044182,- | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-36!180;CL:0000222!5.46e-31!119;CL:0000680!9.50e-21!57;CL:0000056!9.50e-21!57;CL:0000355!9.50e-21!57;CL:0000057!2.56e-19!75;CL:0000187!3.26e-19!54;CL:0000183!1.37e-18!59;CL:0000192!1.44e-16!42;CL:0000514!1.44e-16!42;CL:0000359!2.29e-16!32;CL:0000144!2.32e-16!625;CL:0002371!1.65e-15!591;CL:0000393!2.50e-15!60;CL:0000211!2.50e-15!60;CL:0000220!1.87e-14!246;CL:0002321!5.26e-14!248;CL:0000548!2.69e-13!679;CL:0000004!2.69e-13!679;CL:0000255!2.69e-13!679;CL:0000012!8.06e-13!682;CL:0000213!2.16e-11!57;CL:0000215!2.16e-11!57;CL:0000048!6.09e-10!430;CL:0002078!6.10e-10!44;CL:0000723!4.22e-09!436;CL:0000115!6.40e-09!35;CL:0002620!1.13e-08!23;CL:0002139!1.32e-08!24;CL:0000034!4.72e-08!444;CL:0002494!1.31e-07!16;CL:0000071!1.87e-07!18;CL:0002546!1.87e-07!18;CL:0000003!2.11e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.68e-18;32!CL:0000192;7.19e-12;43!CL:0002494;9.00e-12;16!CL:0000134;4.17e-10;55!CL:0000048;4.58e-10;58!CL:0000723;2.16e-09;61!CL:0000057;4.76e-09;73!CL:0000187;8.45e-08;55!CL:0002320;2.38e-07;188!CL:0002620;5.20e-07;23!CL:0000034;6.68e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.03e-20,32;CL:0000057,8.81e-19,76;CL:0000222,1.96e-18,121;CL:0000680,3.71e-15,58;CL:0000056,3.71e-15,58;CL:0000355,3.71e-15,58;CL:0000192,7.52e-15,43;CL:0000514,7.52e-15,43;CL:0000048,1.22e-14,427;CL:0000187,5.37e-14,55;CL:0000723,6.02e-14,433;CL:0000034,4.63e-13,441;CL:0000393,1.22e-11,61;CL:0000211,1.22e-11,61;CL:0002494,1.34e-11,16;CL:0002321,2.12e-07,250;CL:0002620,6.27e-07,23;CL:0000115,6.42e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;7.19e-12;43!CL:0000355;5.45e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!4.29e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.25e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.85e-28!79;UBERON:0007798!2.85e-28!79;UBERON:0004872!9.43e-25!84;UBERON:0000055!1.07e-24!69;UBERON:0004535!3.57e-23!110;UBERON:0001981!5.15e-23!60;UBERON:0007500!5.15e-23!60;UBERON:0004537!5.15e-23!60;UBERON:0006965!5.15e-23!60;UBERON:0003914!1.29e-22!118;UBERON:0000914!1.68e-22!83;UBERON:0002329!1.68e-22!83;UBERON:0003077!1.68e-22!83;UBERON:0003059!1.68e-22!83;UBERON:0007282!1.68e-22!83;UBERON:0009618!1.68e-22!83;UBERON:0007285!1.68e-22!83;UBERON:0004290!4.58e-22!70;UBERON:0001009!1.09e-21!113;UBERON:0001637!4.12e-20!42;UBERON:0003509!4.12e-20!42;UBERON:0004572!4.12e-20!42;UBERON:0005256!4.62e-19!143;UBERON:0000490!5.85e-19!138;UBERON:0000486!1.24e-18!82;UBERON:0001134!5.48e-18!61;UBERON:0002036!5.48e-18!61;UBERON:0003082!5.48e-18!61;UBERON:0002385!2.50e-17!63;UBERON:0001015!2.50e-17!63;UBERON:0000383!2.50e-17!63;UBERON:0004573!2.25e-15!33;UBERON:0004571!2.25e-15!33;UBERON:0002100!4.37e-13!216;UBERON:0000119!6.67e-13!312;UBERON:0000483!3.13e-12!309;UBERON:0000947!4.11e-10!21;UBERON:0010191!4.11e-10!21;UBERON:0000477!5.17e-10!286;UBERON:0000926!3.78e-09!448;UBERON:0004120!3.78e-09!448;UBERON:0006603!3.78e-09!448;UBERON:0003104!4.97e-09!238;UBERON:0009142!4.97e-09!238;UBERON:0000475!1.47e-08!365;UBERON:0000025!1.03e-07!194;UBERON:0001986!1.87e-07!18;UBERON:0004638!1.87e-07!18;UBERON:0004852!1.87e-07!18;UBERON:0002199!2.29e-07!45;UBERON:0002416!2.29e-07!45;UBERON:0004111!2.98e-07!241;UBERON:0002097!4.25e-07!40;UBERON:0000481!8.55e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.94e-19;42!UBERON:0003509;5.94e-19;42!UBERON:0004572;5.94e-19;42!UBERON:0004573;1.97e-16;33!UBERON:0004571;1.97e-16;33!UBERON:0007500;6.23e-16;56!UBERON:0001981;6.23e-16;56!UBERON:0004537;6.23e-16;56!UBERON:0000055;2.24e-12;65!UBERON:0000947;5.49e-11;21!UBERON:0010191;5.49e-11;21!UBERON:0003914;2.87e-10;74!UBERON:0002049;5.70e-10;75!UBERON:0007798;5.70e-10;75!UBERON:0004535;5.87e-08;109!UBERON:0000948;1.78e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.28e-28,83;UBERON:0007500,4.31e-26,59;UBERON:0001981,4.31e-26,59;UBERON:0004537,4.31e-26,59;UBERON:0006965,4.31e-26,59;UBERON:0003914,1.16e-25,117;UBERON:0002049,1.75e-25,78;UBERON:0007798,1.75e-25,78;UBERON:0004535,2.77e-25,109;UBERON:0001637,5.86e-25,42;UBERON:0003509,5.86e-25,42;UBERON:0004572,5.86e-25,42;UBERON:0000055,1.65e-24,68;UBERON:0001009,4.64e-24,112;UBERON:0007503,3.66e-20,78;UBERON:0000490,6.12e-18,148;UBERON:0002329,6.26e-18,71;UBERON:0003059,6.26e-18,71;UBERON:0007282,6.26e-18,71;UBERON:0004290,6.26e-18,71;UBERON:0009618,6.26e-18,71;UBERON:0004573,7.31e-18,33;UBERON:0004571,7.31e-18,33;UBERON:0003077,1.71e-17,72;UBERON:0007285,1.71e-17,72;UBERON:0007524,4.55e-17,73;UBERON:0000486,3.09e-15,83;UBERON:0005256,2.31e-14,122;UBERON:0001134,1.77e-13,62;UBERON:0002036,1.77e-13,62;UBERON:0003082,1.77e-13,62;UBERON:0002385,1.00e-12,64;UBERON:0001015,1.00e-12,64;UBERON:0000383,1.00e-12,64;UBERON:0000926,1.38e-11,315;UBERON:0004120,1.38e-11,315;UBERON:0006603,1.38e-11,315;UBERON:0000119,3.68e-11,309;UBERON:0000483,4.26e-11,306;UBERON:0000025,6.09e-11,192;UBERON:0000947,1.17e-10,21;UBERON:0010191,1.17e-10,21;UBERON:0000948,1.17e-08,24;UBERON:0005498,1.17e-08,24;UBERON:0004140,1.17e-08,24;UBERON:0009881,1.17e-08,24;UBERON:0004141,1.17e-08,24;UBERON:0003084,1.17e-08,24;UBERON:0007005,1.17e-08,24;UBERON:0004139,1.17e-08,24;UBERON:0004291,1.17e-08,24;UBERON:0003104,1.78e-08,160;UBERON:0009142,1.78e-08,160;UBERON:0002100,5.22e-08,199;UBERON:0004111,5.42e-08,240;UBERON:0003081,5.62e-08,203;UBERON:0002199,2.22e-07,46;UBERON:0002416,2.22e-07,46;UBERON:0007100,3.24e-07,27;UBERON:0002097,4.17e-07,41;UBERON:0010260,8.24e-07,9 | |||
|phase1_expression=0.363356758541113,1.07050261945492,1.40954404095971,0,2.23480547213644,0.872338524100369,0,0,0.522371256399677,1.96587149201207,2.09340350391728,0.873765488520689,0.527533956456907,0.495065411840187,0.331397375727916,2.01697543935533,1.20538905604795,2.92124036154949,3.41552959153355,2.33930010345897,3.4680117511523,0.313454721478088,0.286235987131057,0.136874425072884,2.51085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,3.45228916977532,5.06014813338393,2.50668955317945,1.59331170856906,2.3858578411533,2.43317435151318,0.378139268656271,0.665188192387692,1.75669571386252,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,3.37896092523399,0.860234595106124,1.04142150482278,1.13061588384802,2.09749718104953,3.85165258716094,1.67195973229448,0.258416759169329,0.35576626268671,0.66944122552934,0,3.80136052859256,1.95249646038536,0.367663080345869,2.43042584364528,1.87529429396568,0.22452937262617,1.80178368773316,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,0,3.41902381494365,39.0607083398995,26.3889691088909,1.41867352879343,3.36406560085384,1.06748995729705,2.96001058100592,1.55605517699883,1.34710672069688,1.14423332179421,0.302714855289863,1.72852777344,0,0.624320153660641,1.71141546463335,1.49448680551801,1.52664848236894,1.61872944368132,2.94946694074722,1.02077085627447,0.982674538494144,0,0,3.21447008062124,1.82032272387605,3.59309070908119,0.841680569770331,0.500474079487857,2.49357703935765,2.63386572528503,1.5324389789951,3.75595147266492,3.40296549480063,6.63741652048789,0.427114777637135,1.05965950579781,11.4034616512073,0.515262646192195,15.7160729427834,0.37223371266318,7.25738228637445,0.389748020644795,15.6508940031351,1.10459878370759,0,16.3304412557643,0.503760491138201,1.01736355386293,0,0,0,0,0,0,0,0,0,3.12899064659632,1.92972281457866,1.38134921352481,4.64367928031979,2.88751792667834,0.118306800039844,0,0,0.220587945464788,0,0,0.269662616320329,0,0,2.21446636387394,1.40241773803446,4.5273141246454,0,0,0,0,0,0.122988438543114,2.05881372358231,0,0,0,0,0,0,1.44331342025273,0,1.87853910777315,0.577465791044295,1.38895653772983,0.951270761172991,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.784917590417525,1.30788020649984,0.8800594298514,0.387815147273333,0,1.690605505112,2.12750493267896,1.04007436911366,0.771622122786426,1.41849132023278,0.266422179016099,9.57952557509589,0,0.823240336780769,3.25736184293735,13.5048940522167,7.91951872933429,0.301439377059586,1.74306691720059,1.3996218765488,0,0,0,1.67737398844108,0,1.42636905040718,3.61953266668948,0.61642896765115,3.9393411912777,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.813795071099207,1.45579603071565,0.713715955188647,0.946214490203608,1.63997980989798,0.601892199455438,0,0,2.65690239414175,2.58116835958384,0.955719759148911,0.391602314925481,0,0,0,0,0,0,0.604780586659361,1.98486246255021,2.14846762603287,0.561320188866147,1.53766979106841,1.02341449813341,2.0911009748669,1.48418066444991,1.85051632563187,4.43904313282818,1.06765302817952,0,0.581051892299796,0,0,0,0.34444334449382,1.0925470080403,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,1.13733384070897,1.70093705276516,1.0795795805107,4.62681758070868,0.541892875087706,0,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.656029291399411,1.30151357865721,0.515205058238611,1.37354197227515,1.73269949833235,2.29706215198469,0,0,0.290012154876366,0.770243085573222,0.921022048356777,3.72158745708233,0.859361958946189,0.725083469571143,0.0852266274161009,0.178064071293475,0,0,0.638063562472921,0,0.929691098594572,35.5737951918623,2.0911118104818,0.308033580176089,2.12922412126809,1.73986598415015,4.26245703939016,8.87374297800346,0.744316738719335,2.84741482246853,3.0500831027812,0.767693373934002,0,4.77304871888905,5.49464048139461,0.539617372749944,0,0.824686816419805,2.22400729730648,6.34041284692033,0,0.975267478179181,0.487426979262569,2.11300293513511,0.272999822815972,0.424216295861138,1.13008116620243,1.10273068709225,1.32687795048244,2.63070531152258,0,2.62357900818653,1.82619339266434,1.54911749049875,1.40847801266121,3.58528380510129,1.67023369722306,3.92338156629375,1.06428319221179,0.633322905892992,2.96365403663912,0,0.349934720244983,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0.102268682502155,0,1.55519793830904,0.449341755736634,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.230850775511391,0.797594390929008,0,0,0,0,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0.313932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| ||
|short_description=p12@DDAH1 | |||
}} | }} |
Latest revision as of 13:43, 19 September 2015
Short description: | p12@DDAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_DDAH1_5end |
Coexpression cluster: | C4001_Fibroblast_Smooth_mesenchymal_Mesenchymal_mesothelioma_thyroid_leiomyoma |
Association with transcript: | -124bp_to_ENST00000535924, NM_001134445, uc001dlc.2_5end |
EntrezGene: | DDAH1 |
HGNC: | 2715 |
UniProt: | Q5HYC8B4E3V1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.03e-20 | 32 |
fibroblast | 8.81e-19 | 76 |
mesodermal cell | 1.96e-18 | 121 |
muscle precursor cell | 3.71e-15 | 58 |
myoblast | 3.71e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.71e-15 | 58 |
smooth muscle cell | 7.52e-15 | 43 |
smooth muscle myoblast | 7.52e-15 | 43 |
multi fate stem cell | 1.22e-14 | 427 |
muscle cell | 5.37e-14 | 55 |
somatic stem cell | 6.02e-14 | 433 |
stem cell | 4.63e-13 | 441 |
electrically responsive cell | 1.22e-11 | 61 |
electrically active cell | 1.22e-11 | 61 |
cardiocyte | 1.34e-11 | 16 |
embryonic cell | 2.12e-07 | 250 |
skin fibroblast | 6.27e-07 | 23 |
endothelial cell | 6.42e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-09 | 14 |