FFCP PHASE1:Hg19::chr2:203776982..203777014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79800 | |EntrezGene=79800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14435 | |HGNC=14435 | ||
|TSSclassifier=strong | |||
|UniProt=C9JI92,C9JBK9,F8WC01,F8WDH0,G3V1K7,C9JSN4,C9JT99,C9JZI6,C9JL40,C9JN29,B4DIN8,F8WDW1,B4DIA7 | |UniProt=C9JI92,C9JBK9,F8WC01,F8WDH0,G3V1K7,C9JSN4,C9JT99,C9JZI6,C9JL40,C9JN29,B4DIN8,F8WDW1,B4DIA7 | ||
|association_with_transcript=0bp_to_ENST00000414439,ENST00000414857,ENST00000422368,ENST00000427712,ENST00000428585,ENST00000430899,ENST00000432024,ENST00000434998,ENST00000441569,ENST00000443740,ENST00000445120,ENST00000447539,ENST00000456821,ENST00000457031,ENST00000471271,ENST00000545253,ENST00000545262_5end | |association_with_transcript=0bp_to_ENST00000414439,ENST00000414857,ENST00000422368,ENST00000427712,ENST00000428585,ENST00000430899,ENST00000432024,ENST00000434998,ENST00000441569,ENST00000443740,ENST00000445120,ENST00000447539,ENST00000456821,ENST00000457031,ENST00000471271,ENST00000545253,ENST00000545262_5end | ||
|cluster_id=chr2:203776982..203777014,+ | |||
|coexpression_cluster_id=C1381 | |coexpression_cluster_id=C1381 | ||
|description=CAGE_peak_1_at_ALS2CR8_5end | |description=CAGE_peak_1_at_ALS2CR8_5end | ||
|id=chr2:203776982..203777014,+ | |id=chr2:203776982..203777014,+ | ||
|ontology_enrichment_celltype=CL:0000791;2.14e-07;18!CL:0000789;2.14e-07;18!CL:0002419;2.14e-07;18 | |ontology_enrichment_celltype=CL:0000542!3.76e-09!53;CL:0000051!3.76e-09!53;CL:0000838!5.13e-09!52;CL:0000791!2.24e-07!18;CL:0000789!2.24e-07!18;CL:0002420!2.24e-07!18;CL:0002419!2.24e-07!18;CL:0000790!2.24e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;2.14e-07;18!CL:0000789;2.14e-07;18!CL:0002419;2.14e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.76e-09,53;CL:0000051,3.76e-09,53;CL:0000838,5.12e-09,52;CL:0000791,2.24e-07,18;CL:0000789,2.24e-07,18;CL:0002420,2.24e-07,18;CL:0002419,2.24e-07,18;CL:0000790,2.24e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.87e-09;82!CL:0000790;2.14e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002780;2.61e-17;41!UBERON:0001890;2.61e-17;41!UBERON:0001893;1.28e-16;34!UBERON:0003528;1.53e-16;34!UBERON:0002020;1.53e-16;34!UBERON:0002791;1.67e-16;32!UBERON:0001869;1.98e-16;32!UBERON:0000073;4.26e-16;53!UBERON:0002616;4.26e-16;53!UBERON:0000956;7.42e-14;25!UBERON:0000203;7.42e-14;25!UBERON:0002619;8.49e-14;22!UBERON:0001950;1.38e-12;20!UBERON:0001017;1.82e-11;75!UBERON:0000955;3.16e-11;68!UBERON:0007023;3.38e-11;114!UBERON:0001016;1.15e-10;83!UBERON:0000125;6.07e-07;9!UBERON:0002308;6.07e-07;9!UBERON:0002420;7.32e-07;9!UBERON:0007245;7.32e-07;9!UBERON:0010009;7.32e-07;9!UBERON:0010011;7.32e-07;9!UBERON:0000454;7.32e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.79e-37!115;UBERON:0001049!1.96e-29!57;UBERON:0005068!1.96e-29!57;UBERON:0006241!1.96e-29!57;UBERON:0007135!1.96e-29!57;UBERON:0001017!3.54e-27!82;UBERON:0000073!9.45e-26!94;UBERON:0001016!9.45e-26!94;UBERON:0005743!1.00e-25!86;UBERON:0002616!4.11e-25!59;UBERON:0000955!7.81e-25!69;UBERON:0006238!7.81e-25!69;UBERON:0003080!1.02e-23!42;UBERON:0002780!1.12e-23!41;UBERON:0001890!1.12e-23!41;UBERON:0006240!1.12e-23!41;UBERON:0001893!2.80e-19!34;UBERON:0002020!3.32e-19!34;UBERON:0003528!3.32e-19!34;UBERON:0002791!1.12e-18!33;UBERON:0002346!2.85e-18!90;UBERON:0001869!6.08e-18!32;UBERON:0003075!2.43e-17!86;UBERON:0007284!2.43e-17!86;UBERON:0000153!7.26e-16!129;UBERON:0007811!7.26e-16!129;UBERON:0003056!3.12e-14!61;UBERON:0000924!3.60e-14!173;UBERON:0006601!3.60e-14!173;UBERON:0000956!8.33e-14!25;UBERON:0000203!8.33e-14!25;UBERON:0000033!1.04e-13!123;UBERON:0002619!1.08e-13!22;UBERON:0004121!2.38e-13!169;UBERON:0001950!1.71e-12!20;UBERON:0003076!5.54e-07!15;UBERON:0003057!5.54e-07!15;UBERON:0002308!6.45e-07!9;UBERON:0000125!6.45e-07!9;UBERON:0002420!7.80e-07!9;UBERON:0007245!7.80e-07!9;UBERON:0010009!7.80e-07!9;UBERON:0010011!7.80e-07!9;UBERON:0000454!7.80e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.61e-17;41!UBERON:0001890;2.61e-17;41!UBERON:0001893;1.28e-16;34!UBERON:0003528;1.53e-16;34!UBERON:0002020;1.53e-16;34!UBERON:0002791;1.67e-16;32!UBERON:0001869;1.98e-16;32!UBERON:0000073;4.26e-16;53!UBERON:0002616;4.26e-16;53!UBERON:0000956;7.42e-14;25!UBERON:0000203;7.42e-14;25!UBERON:0002619;8.49e-14;22!UBERON:0001950;1.38e-12;20!UBERON:0001017;1.82e-11;75!UBERON:0000955;3.16e-11;68!UBERON:0007023;3.38e-11;114!UBERON:0001016;1.15e-10;83!UBERON:0000125;6.07e-07;9!UBERON:0002308;6.07e-07;9!UBERON:0002420;7.32e-07;9!UBERON:0007245;7.32e-07;9!UBERON:0010009;7.32e-07;9!UBERON:0010011;7.32e-07;9!UBERON:0000454;7.32e-07;9 | |||
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| ||
|short_description=p1@ALS2CR8 | |short_description=p1@ALS2CR8 | ||
}} | }} |
Latest revision as of 14:58, 19 September 2015
Short description: | p1@ALS2CR8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALS2CR8_5end |
Coexpression cluster: | C1381_corpus_thyroid_cerebellum_pineal_thalamus_pituitary_substantia |
Association with transcript: | 0bp_to_ENST00000414439, ENST00000414857, ENST00000422368, ENST00000427712, ENST00000428585, ENST00000430899, ENST00000432024, ENST00000434998, ENST00000441569, ENST00000443740, ENST00000445120, ENST00000447539, ENST00000456821, ENST00000457031, ENST00000471271, ENST00000545253, ENST00000545262_5end |
EntrezGene: | ALS2CR8 |
HGNC: | 14435 |
UniProt: | C9JI92C9JBK9F8WC01F8WDH0G3V1K7C9JSN4C9JT99C9JZI6C9JL40C9JN29B4DIN8F8WDW1B4DIA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.76e-09 | 53 |
common lymphoid progenitor | 3.76e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.12e-09 | 52 |
mature alpha-beta T cell | 2.24e-07 | 18 |
alpha-beta T cell | 2.24e-07 | 18 |
immature T cell | 2.24e-07 | 18 |
mature T cell | 2.24e-07 | 18 |
immature alpha-beta T cell | 2.24e-07 | 18 |