FFCP PHASE1:Hg19::chr18:53255839..53255854,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:53255839..53255854,-
|short_description=p13@TCF4
|description=CAGE_peak_13_at_TCF4_5end
|association_with_transcript=5bp_to_ENST00000354452,ENST0000035607...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=P15884,B3KVA4,G0LNT9,G0LNU5,G0LNU0 | |UniProt=P15884,B3KVA4,G0LNT9,G0LNU5,G0LNU0 | ||
|association_with_transcript=5bp_to_ENST00000354452,ENST00000356073,NM_001083962,NM_001243230,NM_003199,uc002lfz.2,uc010dph.1_5end | |||
|cluster_id=chr18:53255839..53255854,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_13_at_TCF4_5end | |||
|id=chr18:53255839..53255854,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.71e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.72e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.64e-29!115;UBERON:0001049!6.89e-19!57;UBERON:0005068!6.89e-19!57;UBERON:0006241!6.89e-19!57;UBERON:0007135!6.89e-19!57;UBERON:0001017!6.76e-17!82;UBERON:0005743!1.87e-15!86;UBERON:0002616!1.98e-15!59;UBERON:0003080!5.58e-15!42;UBERON:0002780!7.83e-15!41;UBERON:0001890!7.83e-15!41;UBERON:0006240!7.83e-15!41;UBERON:0000073!1.84e-14!94;UBERON:0001016!1.84e-14!94;UBERON:0002020!4.18e-14!34;UBERON:0003528!4.18e-14!34;UBERON:0000955!4.86e-14!69;UBERON:0006238!4.86e-14!69;UBERON:0001893!6.90e-14!34;UBERON:0002791!1.95e-13!33;UBERON:0001869!8.51e-13!32;UBERON:0002346!2.50e-11!90;UBERON:0002619!6.17e-11!22;UBERON:0000956!1.03e-10!25;UBERON:0000203!1.03e-10!25;UBERON:0003075!1.41e-10!86;UBERON:0007284!1.41e-10!86;UBERON:0001950!1.04e-09!20;UBERON:0000479!3.16e-07!787;UBERON:0003056!7.92e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.87e-20;34!UBERON:0002020;2.87e-20;34!UBERON:0002791;1.66e-19;32!UBERON:0001893;2.05e-19;34!UBERON:0002619;4.59e-19;22!UBERON:0001869;5.14e-19;32!UBERON:0000956;1.28e-17;25!UBERON:0000203;1.28e-17;25!UBERON:0000073;2.08e-17;53!UBERON:0002616;2.08e-17;53!UBERON:0001950;7.49e-17;20!UBERON:0002780;3.20e-16;41!UBERON:0001890;3.20e-16;41!UBERON:0001017;7.67e-10;75!UBERON:0007023;2.13e-09;114!UBERON:0000955;2.15e-09;68!UBERON:0001016;8.34e-09;83!UBERON:0002420;3.92e-08;9!UBERON:0007245;3.92e-08;9!UBERON:0010009;3.92e-08;9!UBERON:0010011;3.92e-08;9!UBERON:0000454;3.92e-08;9!UBERON:0000125;5.37e-08;9!UBERON:0002308;5.37e-08;9!UBERON:0000349;5.05e-07;5!UBERON:0000200;7.79e-07;6!UBERON:0004733;7.97e-07;12!UBERON:0002028;7.97e-07;12!UBERON:0002298;8.01e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.28e-36,114;UBERON:0001049,2.93e-31,56;UBERON:0005068,2.93e-31,56;UBERON:0006241,2.93e-31,56;UBERON:0007135,2.93e-31,56;UBERON:0000073,2.25e-28,53;UBERON:0002616,2.25e-28,53;UBERON:0001017,9.32e-25,81;UBERON:0003528,1.94e-24,34;UBERON:0002020,1.94e-24,34;UBERON:0001893,4.78e-24,34;UBERON:0002780,1.15e-22,41;UBERON:0001890,1.15e-22,41;UBERON:0003080,1.15e-22,41;UBERON:0006240,1.15e-22,41;UBERON:0002791,1.93e-22,32;UBERON:0001869,4.19e-22,32;UBERON:0002346,2.90e-21,86;UBERON:0000955,4.70e-21,68;UBERON:0006238,4.70e-21,68;UBERON:0003075,1.06e-20,82;UBERON:0007284,1.06e-20,82;UBERON:0001016,1.21e-20,89;UBERON:0002619,1.99e-19,22;UBERON:0000956,8.07e-18,25;UBERON:0000203,8.07e-18,25;UBERON:0001950,3.13e-17,20;UBERON:0010371,7.08e-15,104;UBERON:0010314,2.67e-12,132;UBERON:0003056,7.04e-12,61;UBERON:0004111,2.68e-11,240;UBERON:0000025,7.93e-10,192;UBERON:0011216,9.77e-10,223;UBERON:0003076,1.12e-09,15;UBERON:0003057,1.12e-09,15;UBERON:0004121,1.59e-09,171;UBERON:0000924,1.59e-09,171;UBERON:0006601,1.59e-09,171;UBERON:0002420,3.03e-08,9;UBERON:0007245,3.03e-08,9;UBERON:0010009,3.03e-08,9;UBERON:0010011,3.03e-08,9;UBERON:0000454,3.03e-08,9;UBERON:0000125,4.41e-08,9;UBERON:0002308,4.41e-08,9;UBERON:0000200,2.75e-07,6;UBERON:0002298,3.64e-07,6;UBERON:0000349,5.06e-07,5;UBERON:0004733,6.12e-07,12;UBERON:0002028,6.12e-07,12;UBERON:0007277,6.12e-07,12 | |||
|phase1_expression=1.09007027562334,1.71280419112787,0.563817616383885,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,1.14494394852423,0.410623275218653,0.125542639594803,0,0,0,1.57345710739562,0.767658796194425,0.928896739896456,0,0,0,1.62681121218633,0.142169232487422,0.880801318004542,1.10799081706375,0.200544447470142,0.217010870715852,3.13481663935894,0.647787332037959,3.8636335145128,0.290796477559129,0.755751887377619,0.242584061187816,0.232429036905685,0.822335776043652,1.23882548358041,0,0.256160706529101,0.47296445977717,0.689491361473237,1.29096936716765,0,0.376484679085209,0,0.449446968890169,0.918251677112708,0.641858054152187,0.639337125799041,0.989553900560148,0.598390972864896,0,0.580418477257168,0.56738522469114,0,1.00499466102697,1.5644487552606,0.868755378820466,1.21079900526674,0.736555271975129,0.949387162322653,0.633765858935825,0,0.209658645508376,0.336985893439485,0.300353785683013,0.32145117339416,0.285012743741249,0.39783335439818,0.365328307529268,5.27988733383968,1.09227722252426,0,2.56038133539904,1.20118796110804,1.72425731986345,0.661044872784862,1.90810750907073,4.55370375287559,2.93618594685469,4.20500550937752,5.28685314316103,2.24203425192614,3.423993102076,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,0.434539556882471,0.795285947051099,1.94653948121054,0.283604451492204,0,0.175669571386252,2.03017567021455,0,0,0.324547393654683,0.522389211897802,0.132957960518865,43.6437842478776,44.61560304085,40.8603251462521,0.79504962946682,0,1.38856200643038,0.56530794192401,0,0.550236083880135,0,2.84258435086262,3.20189636418039,5.69025041699939,0.805658634218294,0.760272105718513,1.46437234528902,1.10298924103761,0.81014194788176,1.51809538082936,1.12264686313085,1.0135033243499,1.53316637465883,0,0,0,0,0,0,0.506522046658319,0.132409180813219,1.14734648299525,0.709336764396714,0,0,0,1.24484414159907,0.942974704487816,0.490385709340376,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0,0.554128230968366,0,0,0.150238058906597,0.113432183160021,0.89694817844431,0.427114777637135,0.211931901159562,0.600182192168805,0.618315175430633,1.03056216018252,0.37223371266318,2.02531598689519,1.26668106709558,1.51460264546469,0.736399189138395,0.969876340912871,0.710019185033229,0.604512589365842,0.169560592310488,0,0.272746120590835,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,1.73239737313289,0.462985512576611,2.85381228351897,0,0,0.738651018262192,0,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0.387815147273333,0,0,1.32969058292435,0,0,0,0,0.285955987316295,1.08524321078289,0,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.199945982364114,0,1.50677127429638,0,0,0,1.42636905040718,0,0.205476322550383,0.716243852959582,0,0.197030760201927,0,0,1.27047312111232,2.60279707715243,1.54657762555539,3.18280904135263,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0,0.184369168541703,0.695068915744663,0,0,1.24060815673732,0.431428401637234,0.960548020230999,0,0,0,0.992431231275107,1.99500565274481,0.841980283299221,1.02511319404561,2.04682899626681,0.965123526861645,1.48418066444991,0.308419387605311,0.177561725313127,0.574890092096664,0,0.232420756919918,0,0,0.184161977871793,0.229628896329213,0,0.917870904715969,0,0.0770153371044148,0,1.46139224653261,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0.330037999682352,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0,0.170453254832202,0.445160178233687,0,0,0.510450849978337,0,0,0.94443704049192,2.0911118104818,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.95460974377781,0,0.719489830333259,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,1.22849920267187,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,1.05553817648832,0.658589785919804,0,0,0,0,0,3.76575203107117,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,4.08766985276581,2.30830740762312,0.213425530045242,0,0,0,0.846694330895531,0,0.561594356226918,0.456469358066384,0.313359791546046,0,0.169291777801603,0,0,0.425846237690326,0.343505344755765,0.307240764308458,0.894704431569664,0.834245708559542,0.390776190804081,0,0,0,0,0,0,3.51619630252546,0,0,0,0.23874448473769,0,0.307160702099232,2.982442943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| ||
|short_description=p13@TCF4 | |||
}} | }} |
Latest revision as of 21:24, 19 September 2015
Short description: | p13@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TCF4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 5bp_to_ENST00000354452, ENST00000356073, NM_001083962, NM_001243230, NM_003199, uc002lfz.2, uc010dph.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | P15884B3KVA4G0LNT9G0LNU5G0LNU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.72e-08 | 14 |