FFCP PHASE1:Hg19::chr2:211341395..211341408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10314 | |EntrezGene=10314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6508 | |HGNC=6508 | ||
|TSSclassifier=strong | |||
|UniProt=O43813,F8WDS9,Q53TN2 | |UniProt=O43813,F8WDS9,Q53TN2 | ||
|association_with_transcript=20bp_to_ENST00000233714,ENST00000453956,NM_001136574,uc010zjh.1_5end | |association_with_transcript=20bp_to_ENST00000233714,ENST00000453956,NM_001136574,uc010zjh.1_5end | ||
|cluster_id=chr2:211341395..211341408,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_LANCL1_5end | |description=CAGE_peak_3_at_LANCL1_5end | ||
|id=chr2:211341395..211341408,- | |id=chr2:211341395..211341408,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.24e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.77e-25!57;UBERON:0005068!7.77e-25!57;UBERON:0006241!7.77e-25!57;UBERON:0007135!7.77e-25!57;UBERON:0001017!2.09e-24!82;UBERON:0007023!2.25e-24!115;UBERON:0005743!5.89e-24!86;UBERON:0000955!7.64e-24!69;UBERON:0006238!7.64e-24!69;UBERON:0000073!1.09e-23!94;UBERON:0001016!1.09e-23!94;UBERON:0002616!1.95e-22!59;UBERON:0002780!3.85e-20!41;UBERON:0001890!3.85e-20!41;UBERON:0006240!3.85e-20!41;UBERON:0003080!6.25e-19!42;UBERON:0003075!4.79e-17!86;UBERON:0007284!4.79e-17!86;UBERON:0001893!6.25e-17!34;UBERON:0002020!8.16e-17!34;UBERON:0003528!8.16e-17!34;UBERON:0002791!2.85e-16!33;UBERON:0001869!1.38e-15!32;UBERON:0002346!4.10e-15!90;UBERON:0000153!1.42e-14!129;UBERON:0007811!1.42e-14!129;UBERON:0000033!1.58e-14!123;UBERON:0003056!6.40e-13!61;UBERON:0004121!4.98e-12!169;UBERON:0000956!1.77e-11!25;UBERON:0000203!1.77e-11!25;UBERON:0000924!5.30e-11!173;UBERON:0006601!5.30e-11!173;UBERON:0002619!2.44e-10!22;UBERON:0000475!4.33e-10!365;UBERON:0001950!2.80e-09!20;UBERON:0000481!4.99e-09!347;UBERON:0000062!1.04e-07!511;UBERON:0000477!1.43e-07!286;UBERON:0000064!3.93e-07!219;UBERON:0003076!4.18e-07!15;UBERON:0003057!4.18e-07!15;UBERON:0002308!5.50e-07!9;UBERON:0000125!5.50e-07!9;UBERON:0001737!5.80e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.38e-21;34!UBERON:0002780;5.40e-21;41!UBERON:0001890;5.40e-21;41!UBERON:0003528;6.78e-21;34!UBERON:0002020;6.78e-21;34!UBERON:0000073;1.09e-20;53!UBERON:0002616;1.09e-20;53!UBERON:0002791;3.56e-20;32!UBERON:0001869;3.58e-20;32!UBERON:0000956;3.94e-16;25!UBERON:0000203;3.94e-16;25!UBERON:0000955;2.51e-15;68!UBERON:0002619;7.21e-15;22!UBERON:0001017;9.61e-14;75!UBERON:0001950;3.27e-13;20!UBERON:0001016;7.10e-12;83!UBERON:0000125;4.02e-10;9!UBERON:0002308;4.02e-10;9!UBERON:0001737;4.11e-10;9!UBERON:0001557;4.11e-10;9!UBERON:0007023;2.61e-09;114!UBERON:0009663;3.59e-08;7!UBERON:0004732;4.65e-08;13!UBERON:0002298;1.08e-07;6!UBERON:0002420;1.10e-07;9!UBERON:0007245;1.10e-07;9!UBERON:0010009;1.10e-07;9!UBERON:0010011;1.10e-07;9!UBERON:0000454;1.10e-07;9!UBERON:0004733;4.03e-07;12!UBERON:0002028;4.03e-07;12!UBERON:0000200;4.72e-07;6 | |||
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| ||
|short_description=p3@LANCL1 | |short_description=p3@LANCL1 | ||
}} | }} |
Latest revision as of 22:09, 19 September 2015
Short description: | p3@LANCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LANCL1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 20bp_to_ENST00000233714, ENST00000453956, NM_001136574, uc010zjh.1_5end |
EntrezGene: | LANCL1 |
HGNC: | 6508 |
UniProt: | O43813F8WDS9Q53TN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data