FFCP PHASE1:Hg19::chr3:123813509..123813520,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8997 | |EntrezGene=8997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4814 | |HGNC=4814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000488825_5end | |association_with_transcript=1bp_to_ENST00000488825_5end | ||
|cluster_id=chr3:123813509..123813520,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_23_at_KALRN_5end | |description=CAGE_peak_23_at_KALRN_5end | ||
|id=chr3:123813509..123813520,+ | |id=chr3:123813509..123813520,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.28e-07;82!UBERON:0006215;8.38e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.92e-88!34;UBERON:0001869!9.03e-87!32;UBERON:0002780!1.39e-85!41;UBERON:0001890!1.39e-85!41;UBERON:0006240!1.39e-85!41;UBERON:0002791!6.44e-84!33;UBERON:0003080!1.85e-83!42;UBERON:0002020!2.63e-81!34;UBERON:0003528!2.63e-81!34;UBERON:0001049!2.75e-80!57;UBERON:0005068!2.75e-80!57;UBERON:0006241!2.75e-80!57;UBERON:0007135!2.75e-80!57;UBERON:0002619!1.78e-79!22;UBERON:0002616!2.13e-72!59;UBERON:0000956!8.27e-70!25;UBERON:0000203!8.27e-70!25;UBERON:0001950!2.16e-69!20;UBERON:0000955!5.16e-69!69;UBERON:0006238!5.16e-69!69;UBERON:0001017!3.84e-65!82;UBERON:0005743!6.99e-62!86;UBERON:0003056!4.20e-56!61;UBERON:0000073!1.57e-55!94;UBERON:0001016!1.57e-55!94;UBERON:0007023!3.26e-55!115;UBERON:0003075!5.04e-55!86;UBERON:0007284!5.04e-55!86;UBERON:0002346!2.54e-52!90;UBERON:0000033!3.96e-39!123;UBERON:0000153!4.92e-37!129;UBERON:0007811!4.92e-37!129;UBERON:0000200!6.72e-32!6;UBERON:0004121!2.09e-28!169;UBERON:0000924!1.31e-27!173;UBERON:0006601!1.31e-27!173;UBERON:0000349!1.85e-26!5;UBERON:0001871!1.43e-23!7;UBERON:0002420!5.15e-20!9;UBERON:0007245!5.15e-20!9;UBERON:0010009!5.15e-20!9;UBERON:0010011!5.15e-20!9;UBERON:0000454!5.15e-20!9;UBERON:0000025!2.21e-19!194;UBERON:0002021!2.95e-17!5;UBERON:0002771!3.62e-17!3;UBERON:0001872!4.29e-17!5;UBERON:0004111!2.34e-14!241;UBERON:0002308!8.74e-14!9;UBERON:0000125!8.74e-14!9;UBERON:0000477!3.72e-12!286;UBERON:0001954!4.89e-12!2;UBERON:0003022!4.89e-12!2;UBERON:0002421!4.89e-12!2;UBERON:0002600!4.89e-12!2;UBERON:0000369!5.52e-12!4;UBERON:0002435!5.52e-12!4;UBERON:0000204!5.52e-12!4;UBERON:0010082!5.52e-12!4;UBERON:0001870!5.75e-12!2;UBERON:0009663!8.74e-12!7;UBERON:0000007!1.09e-11!2;UBERON:0001876!1.50e-11!2;UBERON:0000064!1.56e-11!219;UBERON:0000483!1.04e-10!309;UBERON:0000119!1.53e-10!312;UBERON:0000475!1.02e-09!365;UBERON:0005383!1.04e-07!3;UBERON:0005382!1.04e-07!3;UBERON:0000062!1.58e-07!511;UBERON:0003112!6.96e-07!1;UBERON:0000032!6.96e-07!1;UBERON:0005253!6.96e-07!1;UBERON:0003128!6.96e-07!1;UBERON:0002241!6.96e-07!1;UBERON:0001703!6.96e-07!1;UBERON:0004761!6.96e-07!1;UBERON:0009617!6.96e-07!1;UBERON:0002702!7.35e-07!1 | |ontology_enrichment_uberon=UBERON:0001893!1.92e-88!34;UBERON:0001869!9.03e-87!32;UBERON:0002780!1.39e-85!41;UBERON:0001890!1.39e-85!41;UBERON:0006240!1.39e-85!41;UBERON:0002791!6.44e-84!33;UBERON:0003080!1.85e-83!42;UBERON:0002020!2.63e-81!34;UBERON:0003528!2.63e-81!34;UBERON:0001049!2.75e-80!57;UBERON:0005068!2.75e-80!57;UBERON:0006241!2.75e-80!57;UBERON:0007135!2.75e-80!57;UBERON:0002619!1.78e-79!22;UBERON:0002616!2.13e-72!59;UBERON:0000956!8.27e-70!25;UBERON:0000203!8.27e-70!25;UBERON:0001950!2.16e-69!20;UBERON:0000955!5.16e-69!69;UBERON:0006238!5.16e-69!69;UBERON:0001017!3.84e-65!82;UBERON:0005743!6.99e-62!86;UBERON:0003056!4.20e-56!61;UBERON:0000073!1.57e-55!94;UBERON:0001016!1.57e-55!94;UBERON:0007023!3.26e-55!115;UBERON:0003075!5.04e-55!86;UBERON:0007284!5.04e-55!86;UBERON:0002346!2.54e-52!90;UBERON:0000033!3.96e-39!123;UBERON:0000153!4.92e-37!129;UBERON:0007811!4.92e-37!129;UBERON:0000200!6.72e-32!6;UBERON:0004121!2.09e-28!169;UBERON:0000924!1.31e-27!173;UBERON:0006601!1.31e-27!173;UBERON:0000349!1.85e-26!5;UBERON:0001871!1.43e-23!7;UBERON:0002420!5.15e-20!9;UBERON:0007245!5.15e-20!9;UBERON:0010009!5.15e-20!9;UBERON:0010011!5.15e-20!9;UBERON:0000454!5.15e-20!9;UBERON:0000025!2.21e-19!194;UBERON:0002021!2.95e-17!5;UBERON:0002771!3.62e-17!3;UBERON:0001872!4.29e-17!5;UBERON:0004111!2.34e-14!241;UBERON:0002308!8.74e-14!9;UBERON:0000125!8.74e-14!9;UBERON:0000477!3.72e-12!286;UBERON:0001954!4.89e-12!2;UBERON:0003022!4.89e-12!2;UBERON:0002421!4.89e-12!2;UBERON:0002600!4.89e-12!2;UBERON:0000369!5.52e-12!4;UBERON:0002435!5.52e-12!4;UBERON:0000204!5.52e-12!4;UBERON:0010082!5.52e-12!4;UBERON:0001870!5.75e-12!2;UBERON:0009663!8.74e-12!7;UBERON:0000007!1.09e-11!2;UBERON:0001876!1.50e-11!2;UBERON:0000064!1.56e-11!219;UBERON:0000483!1.04e-10!309;UBERON:0000119!1.53e-10!312;UBERON:0000475!1.02e-09!365;UBERON:0005383!1.04e-07!3;UBERON:0005382!1.04e-07!3;UBERON:0000062!1.58e-07!511;UBERON:0003112!6.96e-07!1;UBERON:0000032!6.96e-07!1;UBERON:0005253!6.96e-07!1;UBERON:0003128!6.96e-07!1;UBERON:0002241!6.96e-07!1;UBERON:0001703!6.96e-07!1;UBERON:0004761!6.96e-07!1;UBERON:0009617!6.96e-07!1;UBERON:0002702!7.35e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.71e-57;22!UBERON:0000956;1.22e-50;25!UBERON:0000203;1.22e-50;25!UBERON:0001870;9.27e-50;3!UBERON:0000200;4.96e-44;6!UBERON:0001950;4.88e-38;20!UBERON:0002791;1.93e-34;32!UBERON:0001869;1.93e-34;32!UBERON:0001954;3.05e-34;2!UBERON:0003022;3.05e-34;2!UBERON:0002421;3.05e-34;2!UBERON:0002600;3.05e-34;2!UBERON:0002771;8.37e-34;2!UBERON:0002702;8.37e-34;2!UBERON:0003528;2.95e-32;34!UBERON:0002020;2.95e-32;34!UBERON:0001893;8.98e-31;34!UBERON:0002780;6.89e-28;41!UBERON:0001890;6.89e-28;41!UBERON:0000073;1.87e-21;53!UBERON:0002616;1.87e-21;53!UBERON:0002022;8.01e-18;1!UBERON:0003112;8.01e-18;1!UBERON:0011158;8.01e-18;1!UBERON:0003128;8.01e-18;1!UBERON:0001703;8.01e-18;1!UBERON:0002241;8.01e-18;1!UBERON:0000955;3.07e-16;68!UBERON:0000349;2.41e-14;5!UBERON:0001017;1.65e-11;75!UBERON:0001871;2.13e-10;6!UBERON:0001016;1.05e-09;83!UBERON:0000007;1.38e-09;2!UBERON:0011216;5.12e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.17e-57,22;UBERON:0000956,1.79e-50,25;UBERON:0000203,1.79e-50,25;UBERON:0001870,1.41e-49,3;UBERON:0000200,3.19e-44,6;UBERON:0002791,1.11e-39,32;UBERON:0001869,1.11e-39,32;UBERON:0002780,1.89e-38,41;UBERON:0001890,1.89e-38,41;UBERON:0003080,1.89e-38,41;UBERON:0006240,1.89e-38,41;UBERON:0001950,5.63e-38,20;UBERON:0003528,2.19e-37,34;UBERON:0002020,2.19e-37,34;UBERON:0001893,2.19e-37,34;UBERON:0000073,4.50e-36,53;UBERON:0002616,4.50e-36,53;UBERON:0001049,3.85e-34,56;UBERON:0005068,3.85e-34,56;UBERON:0006241,3.85e-34,56;UBERON:0007135,3.85e-34,56;UBERON:0002771,4.29e-34,2;UBERON:0001954,6.00e-34,2;UBERON:0003022,6.00e-34,2;UBERON:0002421,6.00e-34,2;UBERON:0002600,6.00e-34,2;UBERON:0002702,8.39e-34,2;UBERON:0000955,1.12e-27,68;UBERON:0006238,1.12e-27,68;UBERON:0003056,7.46e-26,61;UBERON:0001017,3.13e-23,81;UBERON:0003075,3.13e-23,82;UBERON:0007284,3.13e-23,82;UBERON:0002346,3.96e-22,86;UBERON:0001016,6.93e-21,89;UBERON:0010371,3.33e-18,104;UBERON:0003112,5.26e-18,1;UBERON:0011158,5.26e-18,1;UBERON:0003128,5.26e-18,1;UBERON:0001703,5.26e-18,1;UBERON:0002241,5.26e-18,1;UBERON:0004761,5.26e-18,1;UBERON:0009617,5.26e-18,1;UBERON:0002022,1.70e-17,1;UBERON:0010314,4.81e-17,132;UBERON:0007023,9.89e-17,114;UBERON:0000349,3.15e-14,5;UBERON:0004121,1.22e-10,171;UBERON:0000924,1.22e-10,171;UBERON:0006601,1.22e-10,171;UBERON:0001871,1.77e-10,6;UBERON:0000007,9.46e-10,2;UBERON:0005253,1.12e-09,2;UBERON:0011216,1.33e-09,223;UBERON:0000025,1.69e-09,192;UBERON:0004111,2.10e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,1.52581736317083,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,2.38568906942791,1.22583065500418,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.3771002377715,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,2.8339315265117,0.957803154342908,0.615349092722265,0,0.691572524642179,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.826747186004736,0.951237152908602,0,0,0,0,0,0,0,0.606965604236632,1.82129753081038,0,0,0,0,0.789273282754189,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,1.52581736317083,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,2.38568906942791,1.22583065500418,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.3771002377715,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,2.8339315265117,0.957803154342908,0.615349092722265,0,0.691572524642179,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.826747186004736,0.951237152908602,0,0,0,0,0,0,0,0.606965604236632,1.82129753081038,0,0,0,0,0.789273282754189,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p23@KALRN | |short_description=p23@KALRN | ||
}} | }} |
Latest revision as of 02:13, 20 September 2015
Short description: | p23@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_KALRN_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 1bp_to_ENST00000488825_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data