FFCP PHASE1:Hg19::chr11:73882030..73882051,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:73882030..73882051,-
|short_description=p1@C2CD3
|description=CAGE_peak_1_at_C2CD3_5end
|association_with_transcript=0bp_to_ENST00000541922_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26005 | |EntrezGene=26005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24564 | |HGNC=24564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000541922_5end | |||
|cluster_id=chr11:73882030..73882051,- | |||
|description=CAGE_peak_1_at_C2CD3_5end | |||
|id=chr11:73882030..73882051,- | |||
|ontology_enrichment_celltype=CL:0000542!1.83e-11!53;CL:0000051!1.83e-11!53;CL:0000838!2.48e-11!52;CL:0000791!5.11e-10!18;CL:0000789!5.11e-10!18;CL:0002420!5.11e-10!18;CL:0002419!5.11e-10!18;CL:0000790!5.11e-10!18;CL:0000084!6.18e-08!25;CL:0000827!6.18e-08!25;CL:0000625!2.19e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.62e-10;18!CL:0000789;1.62e-10;18!CL:0002419;1.62e-10;18!CL:0000084;2.22e-08;25!CL:0000625;1.17e-07;11!CL:0000542;7.77e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.08e-11,53;CL:0000051,1.08e-11,53;CL:0000838,1.48e-11,52;CL:0000791,2.22e-10,18;CL:0000789,2.22e-10,18;CL:0002420,2.22e-10,18;CL:0002419,2.22e-10,18;CL:0000790,2.22e-10,18;CL:0000084,2.75e-08,25;CL:0000827,2.75e-08,25;CL:0000625,1.23e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.62e-10;18!UBERON:0006601;2.21e-08;82!CL:0000051;7.77e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.82e-36!115;UBERON:0001049!4.24e-21!57;UBERON:0005068!4.24e-21!57;UBERON:0006241!4.24e-21!57;UBERON:0007135!4.24e-21!57;UBERON:0005743!4.94e-20!86;UBERON:0001017!1.00e-19!82;UBERON:0000073!1.87e-19!94;UBERON:0001016!1.87e-19!94;UBERON:0000955!4.62e-19!69;UBERON:0006238!4.62e-19!69;UBERON:0002616!1.34e-17!59;UBERON:0003080!7.06e-17!42;UBERON:0002780!9.63e-17!41;UBERON:0001890!9.63e-17!41;UBERON:0006240!9.63e-17!41;UBERON:0003075!1.09e-16!86;UBERON:0007284!1.09e-16!86;UBERON:0002346!1.94e-16!90;UBERON:0001893!2.37e-14!34;UBERON:0002020!2.50e-14!34;UBERON:0003528!2.50e-14!34;UBERON:0002791!7.35e-14!33;UBERON:0001869!4.35e-13!32;UBERON:0003056!1.26e-11!61;UBERON:0000153!7.75e-11!129;UBERON:0007811!7.75e-11!129;UBERON:0000924!4.69e-10!173;UBERON:0006601!4.69e-10!173;UBERON:0004121!5.24e-10!169;UBERON:0002619!6.03e-10!22;UBERON:0000956!1.23e-09!25;UBERON:0000203!1.23e-09!25;UBERON:0000033!2.17e-09!123;UBERON:0001950!4.69e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.11e-13;34!UBERON:0002020;2.11e-13;34!UBERON:0001893;4.67e-13;34!UBERON:0002780;7.29e-13;41!UBERON:0001890;7.29e-13;41!UBERON:0000073;8.25e-13;53!UBERON:0002616;8.25e-13;53!UBERON:0002791;1.56e-12;32!UBERON:0001869;2.05e-12;32!UBERON:0002619;1.32e-10;22!UBERON:0000956;2.88e-10;25!UBERON:0000203;2.88e-10;25!UBERON:0007023;3.04e-10;114!UBERON:0000955;5.85e-10;68!UBERON:0001950;9.50e-10;20!UBERON:0001017;1.34e-09;75!UBERON:0001016;1.86e-09;83!UBERON:0000125;8.01e-07;9!UBERON:0002308;8.01e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.02e-36,114;UBERON:0001049,9.06e-22,56;UBERON:0005068,9.06e-22,56;UBERON:0006241,9.06e-22,56;UBERON:0007135,9.06e-22,56;UBERON:0000073,4.79e-20,53;UBERON:0002616,4.79e-20,53;UBERON:0001017,9.65e-20,81;UBERON:0000955,1.48e-19,68;UBERON:0006238,1.48e-19,68;UBERON:0001016,4.17e-19,89;UBERON:0002780,1.13e-17,41;UBERON:0001890,1.13e-17,41;UBERON:0003080,1.13e-17,41;UBERON:0006240,1.13e-17,41;UBERON:0003075,6.95e-16,82;UBERON:0007284,6.95e-16,82;UBERON:0002346,2.11e-15,86;UBERON:0001893,3.52e-15,34;UBERON:0003528,3.74e-15,34;UBERON:0002020,3.74e-15,34;UBERON:0002791,5.46e-14,32;UBERON:0001869,7.43e-14,32;UBERON:0003056,1.34e-12,61;UBERON:0002619,1.39e-10,22;UBERON:0011216,1.65e-10,223;UBERON:0010371,2.68e-10,104;UBERON:0000956,3.07e-10,25;UBERON:0000203,3.07e-10,25;UBERON:0001950,1.18e-09,20;UBERON:0004121,3.60e-08,171;UBERON:0000924,3.60e-08,171;UBERON:0006601,3.60e-08,171;UBERON:0010314,6.43e-08,132 | |||
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| ||
|short_description=p1@C2CD3 | |||
}} | }} |
Latest revision as of 04:41, 20 September 2015
Short description: | p1@C2CD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2CD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000541922_5end |
EntrezGene: | C2CD3 |
HGNC: | 24564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.08e-11 | 53 |
common lymphoid progenitor | 1.08e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.48e-11 | 52 |
mature alpha-beta T cell | 2.22e-10 | 18 |
alpha-beta T cell | 2.22e-10 | 18 |
immature T cell | 2.22e-10 | 18 |
mature T cell | 2.22e-10 | 18 |
immature alpha-beta T cell | 2.22e-10 | 18 |
T cell | 2.75e-08 | 25 |
pro-T cell | 2.75e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.23e-07 | 11 |