FFCP PHASE1:Hg19::chr4:103749205..103749228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |EntrezGene=7323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |HGNC=12476 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGD0 | |UniProt=D6RGD0 | ||
|association_with_transcript=0bp_to_ENST00000508249_5end | |association_with_transcript=0bp_to_ENST00000508249_5end | ||
|cluster_id=chr4:103749205..103749228,- | |||
|description=CAGE_peak_8_at_UBE2D3_5end | |description=CAGE_peak_8_at_UBE2D3_5end | ||
|id=chr4:103749205..103749228,- | |id=chr4:103749205..103749228,- | ||
|ontology_enrichment_celltype=CL:0000860!1.05e-17!45;CL:0000766!1.58e-17!76;CL:0002057!2.81e-17!42;CL:0000839!2.33e-15!70;CL:0002194!1.45e-13!63;CL:0000576!1.45e-13!63;CL:0000040!1.45e-13!63;CL:0000559!1.45e-13!63;CL:0002009!1.60e-13!65;CL:0000557!1.95e-13!71;CL:0000738!2.82e-10!140;CL:0002031!4.87e-09!124;CL:0000763!3.07e-08!112;CL:0000049!3.07e-08!112;CL:0002087!1.29e-07!119 | |ontology_enrichment_celltype=CL:0000860!1.05e-17!45;CL:0000766!1.58e-17!76;CL:0002057!2.81e-17!42;CL:0000839!2.33e-15!70;CL:0002194!1.45e-13!63;CL:0000576!1.45e-13!63;CL:0000040!1.45e-13!63;CL:0000559!1.45e-13!63;CL:0002009!1.60e-13!65;CL:0000557!1.95e-13!71;CL:0000738!2.82e-10!140;CL:0002031!4.87e-09!124;CL:0000763!3.07e-08!112;CL:0000049!3.07e-08!112;CL:0002087!1.29e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-14;33!CL:0002057;1.10e-14;33!CL:0000473;3.25e-11;39!CL:0000234;3.25e-11;39!CL:0000576;2.49e-10;48!CL:0000766;4.80e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.61e-18,72;CL:0000860,2.81e-17,42;CL:0002057,2.81e-17,42;CL:0000473,1.20e-15,48;CL:0000234,1.20e-15,48;CL:0000839,1.34e-15,66;CL:0002194,8.46e-14,59;CL:0000576,8.46e-14,59;CL:0000040,8.46e-14,59;CL:0000559,8.46e-14,59;CL:0002009,9.78e-14,61;CL:0000557,1.34e-13,67;CL:0000738,3.43e-10,136;CL:0002031,5.83e-09,120;CL:0000763,3.63e-08,108;CL:0000049,3.63e-08,108;CL:0002087,1.56e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-30!115;UBERON:0002390!1.51e-12!102;UBERON:0003061!1.51e-12!102;UBERON:0002371!2.14e-10!80;UBERON:0001049!1.07e-09!57;UBERON:0005068!1.07e-09!57;UBERON:0006241!1.07e-09!57;UBERON:0007135!1.07e-09!57;UBERON:0002193!5.30e-09!112;UBERON:0003080!1.32e-08!42;UBERON:0002780!3.08e-08!41;UBERON:0001890!3.08e-08!41;UBERON:0006240!3.08e-08!41;UBERON:0000922!3.78e-08!612;UBERON:0000062!6.55e-08!511;UBERON:0001474!7.33e-08!86;UBERON:0002616!9.94e-08!59;UBERON:0001017!1.97e-07!82;UBERON:0005743!2.00e-07!86;UBERON:0004765!3.35e-07!101;UBERON:0001434!3.35e-07!101;UBERON:0000468!6.75e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!1.13e-30!115;UBERON:0002390!1.51e-12!102;UBERON:0003061!1.51e-12!102;UBERON:0002371!2.14e-10!80;UBERON:0001049!1.07e-09!57;UBERON:0005068!1.07e-09!57;UBERON:0006241!1.07e-09!57;UBERON:0007135!1.07e-09!57;UBERON:0002193!5.30e-09!112;UBERON:0003080!1.32e-08!42;UBERON:0002780!3.08e-08!41;UBERON:0001890!3.08e-08!41;UBERON:0006240!3.08e-08!41;UBERON:0000922!3.78e-08!612;UBERON:0000062!6.55e-08!511;UBERON:0001474!7.33e-08!86;UBERON:0002616!9.94e-08!59;UBERON:0001017!1.97e-07!82;UBERON:0005743!2.00e-07!86;UBERON:0004765!3.35e-07!101;UBERON:0001434!3.35e-07!101;UBERON:0000468!6.75e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.13e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.45e-30,114;UBERON:0002390,1.49e-12,98;UBERON:0003061,1.49e-12,98;UBERON:0002371,1.99e-10,76;UBERON:0001049,2.43e-09,56;UBERON:0005068,2.43e-09,56;UBERON:0006241,2.43e-09,56;UBERON:0007135,2.43e-09,56;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0002050,3.96e-09,564;UBERON:0000922,4.13e-09,592;UBERON:0002193,6.05e-09,108;UBERON:0000923,2.67e-08,560;UBERON:0010316,2.67e-08,560;UBERON:0005291,2.67e-08,560;UBERON:0006598,2.67e-08,560;UBERON:0010317,2.67e-08,560;UBERON:0002532,2.67e-08,560;UBERON:0002780,3.08e-08,41;UBERON:0001890,3.08e-08,41;UBERON:0003080,3.08e-08,41;UBERON:0006240,3.08e-08,41;UBERON:0001474,8.03e-08,82;UBERON:0005423,8.58e-08,581;UBERON:0001017,3.75e-07,81;UBERON:0004765,4.46e-07,90 | |||
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| ||
|short_description=p8@UBE2D3 | |short_description=p8@UBE2D3 | ||
}} | }} |
Latest revision as of 05:09, 20 September 2015
Short description: | p8@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UBE2D3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508249_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | D6RGD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.61e-18 | 72 |
classical monocyte | 2.81e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.81e-17 | 42 |
defensive cell | 1.20e-15 | 48 |
phagocyte | 1.20e-15 | 48 |
myeloid lineage restricted progenitor cell | 1.34e-15 | 66 |
monopoietic cell | 8.46e-14 | 59 |
monocyte | 8.46e-14 | 59 |
monoblast | 8.46e-14 | 59 |
promonocyte | 8.46e-14 | 59 |
macrophage dendritic cell progenitor | 9.78e-14 | 61 |
granulocyte monocyte progenitor cell | 1.34e-13 | 67 |
leukocyte | 3.43e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 5.83e-09 | 120 |
myeloid cell | 3.63e-08 | 108 |
common myeloid progenitor | 3.63e-08 | 108 |
nongranular leukocyte | 1.56e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.45e-30 | 114 |
hematopoietic system | 1.49e-12 | 98 |
blood island | 1.49e-12 | 98 |
bone marrow | 1.99e-10 | 76 |
neural tube | 2.43e-09 | 56 |
neural rod | 2.43e-09 | 56 |
future spinal cord | 2.43e-09 | 56 |
neural keel | 2.43e-09 | 56 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
embryonic structure | 3.96e-09 | 564 |
embryo | 4.13e-09 | 592 |
hemolymphoid system | 6.05e-09 | 108 |
germ layer | 2.67e-08 | 560 |
germ layer / neural crest | 2.67e-08 | 560 |
embryonic tissue | 2.67e-08 | 560 |
presumptive structure | 2.67e-08 | 560 |
germ layer / neural crest derived structure | 2.67e-08 | 560 |
epiblast (generic) | 2.67e-08 | 560 |
regional part of forebrain | 3.08e-08 | 41 |
forebrain | 3.08e-08 | 41 |
anterior neural tube | 3.08e-08 | 41 |
future forebrain | 3.08e-08 | 41 |
bone element | 8.03e-08 | 82 |
developing anatomical structure | 8.58e-08 | 581 |
central nervous system | 3.75e-07 | 81 |
skeletal element | 4.46e-07 | 90 |