FFCP PHASE1:Hg19::chr6:99282722..99282737,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:99282722..99282737,+ to FFCP PHASE1:Hg19::chr6:99282722..99282737,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5454 | |EntrezGene=5454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9215 | |HGNC=9215 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTH8 | |UniProt=B3KTH8 | ||
|association_with_transcript=-12bp_to_ENST00000425116_5end | |||
|cluster_id=chr6:99282722..99282737,+ | |||
|coexpression_cluster_id=C2872 | |||
|description=CAGE_peak_6_at_POU3F2_5end | |||
|id=chr6:99282722..99282737,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.02e-11!25;CL:0000133!1.80e-10!59;CL:0000047!6.46e-09!8;CL:0000221!9.80e-08!71;CL:0000333!2.90e-07!41;CL:0000128!8.96e-07!7;CL:0000126!8.96e-07!7;CL:0000127!8.96e-07!7;CL:0002453!8.96e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.74e-18;25!CL:0000047;5.93e-12;2!CL:0000123;1.27e-11;2!CL:0000242;1.27e-11;2!CL:0000540;1.29e-08;6!CL:0000404;1.29e-08;6!CL:0002605;7.65e-08;3!CL:0000128;2.91e-07;7!CL:0000126;2.91e-07;7!CL:0000127;2.91e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.83e-18,25;CL:0000047,9.25e-17,8;CL:0000133,8.33e-14,59;CL:0000242,1.31e-11,2;CL:0000221,7.51e-11,72;CL:0000540,1.26e-08,6;CL:0000031,1.26e-08,6;CL:0000404,1.26e-08,6;CL:0002605,8.06e-08,3;CL:0000128,2.91e-07,7;CL:0000126,2.91e-07,7;CL:0000127,2.91e-07,7;CL:0002453,2.91e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000133;8.71e-09;59!CL:0000031;1.29e-08;6!UBERON:0006238;1.25e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.12e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.66e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.15e-50!94;UBERON:0001016!2.15e-50!94;UBERON:0001017!3.63e-49!82;UBERON:0005743!5.95e-48!86;UBERON:0001049!6.98e-43!57;UBERON:0005068!6.98e-43!57;UBERON:0006241!6.98e-43!57;UBERON:0007135!6.98e-43!57;UBERON:0000955!4.97e-41!69;UBERON:0006238!4.97e-41!69;UBERON:0001893!5.82e-41!34;UBERON:0002020!1.54e-40!34;UBERON:0003528!1.54e-40!34;UBERON:0002791!2.58e-39!33;UBERON:0002616!1.42e-38!59;UBERON:0001869!8.97e-38!32;UBERON:0002780!1.21e-37!41;UBERON:0001890!1.21e-37!41;UBERON:0006240!1.21e-37!41;UBERON:0003080!1.61e-36!42;UBERON:0000924!2.23e-32!173;UBERON:0006601!2.23e-32!173;UBERON:0002346!4.52e-31!90;UBERON:0000956!1.35e-30!25;UBERON:0000203!1.35e-30!25;UBERON:0004121!5.47e-30!169;UBERON:0003075!1.92e-28!86;UBERON:0007284!1.92e-28!86;UBERON:0002619!7.97e-26!22;UBERON:0001950!8.28e-26!20;UBERON:0003056!3.93e-25!61;UBERON:0000033!1.30e-21!123;UBERON:0000153!5.75e-20!129;UBERON:0007811!5.75e-20!129;UBERON:0007023!5.30e-14!115;UBERON:0002420!2.25e-11!9;UBERON:0007245!2.25e-11!9;UBERON:0010009!2.25e-11!9;UBERON:0010011!2.25e-11!9;UBERON:0000454!2.25e-11!9;UBERON:0002308!3.03e-11!9;UBERON:0000125!3.03e-11!9;UBERON:0000200!4.39e-11!6;UBERON:0001871!6.45e-11!7;UBERON:0000064!5.34e-10!219;UBERON:0004732!1.77e-09!13;UBERON:0009663!1.87e-08!7;UBERON:0004733!5.13e-08!12;UBERON:0002028!5.13e-08!12;UBERON:0007277!5.13e-08!12;UBERON:0003076!6.13e-08!15;UBERON:0003057!6.13e-08!15;UBERON:0002298!1.51e-07!8;UBERON:0000025!3.51e-07!194;UBERON:0002021!7.26e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.48e-30;25!UBERON:0000203;8.48e-30;25!UBERON:0001950;1.45e-26;20!UBERON:0001893;1.05e-24;34!UBERON:0002619;4.55e-24;22!UBERON:0001869;2.12e-22;32!UBERON:0002791;1.45e-19;32!UBERON:0003528;7.07e-19;34!UBERON:0002020;7.07e-19;34!UBERON:0002780;2.36e-18;41!UBERON:0001890;2.36e-18;41!UBERON:0002021;1.81e-16;5!UBERON:0001017;4.59e-14;75!UBERON:0001016;1.48e-13;83!UBERON:0000073;5.14e-12;53!UBERON:0002616;5.14e-12;53!UBERON:0003714;1.79e-11;2!UBERON:0005162;6.12e-11;2!UBERON:0000122;6.12e-11;2!UBERON:0000955;4.13e-10;68!UBERON:0001872;1.56e-09;5!UBERON:0001003;3.49e-08;15!UBERON:0007376;3.49e-08;15!UBERON:0000200;7.97e-08;6!UBERON:0001871;6.20e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.97e-40,89;UBERON:0001017,1.50e-35,81;UBERON:0000956,1.19e-29,25;UBERON:0000203,1.19e-29,25;UBERON:0001893,1.43e-28,34;UBERON:0004121,6.53e-27,171;UBERON:0000924,6.53e-27,171;UBERON:0006601,6.53e-27,171;UBERON:0002780,1.21e-26,41;UBERON:0001890,1.21e-26,41;UBERON:0003080,1.21e-26,41;UBERON:0006240,1.21e-26,41;UBERON:0001869,1.83e-26,32;UBERON:0001950,1.98e-26,20;UBERON:0000955,5.32e-24,68;UBERON:0006238,5.32e-24,68;UBERON:0002619,6.03e-24,22;UBERON:0002791,8.75e-23,32;UBERON:0003528,2.51e-21,34;UBERON:0002020,2.51e-21,34;UBERON:0001049,2.55e-21,56;UBERON:0005068,2.55e-21,56;UBERON:0006241,2.55e-21,56;UBERON:0007135,2.55e-21,56;UBERON:0000073,6.10e-20,53;UBERON:0002616,6.10e-20,53;UBERON:0010371,7.16e-20,104;UBERON:0003056,2.49e-19,61;UBERON:0002021,2.77e-16,5;UBERON:0011216,2.80e-16,223;UBERON:0003075,2.46e-15,82;UBERON:0007284,2.46e-15,82;UBERON:0002346,1.89e-14,86;UBERON:0003714,1.70e-11,2;UBERON:0005162,5.00e-11,2;UBERON:0000122,5.00e-11,2;UBERON:0010314,2.05e-10,132;UBERON:0001872,1.70e-09,5;UBERON:0001003,3.60e-08,15;UBERON:0007376,3.60e-08,15;UBERON:0007383,3.60e-08,15;UBERON:0000200,8.47e-08,6;UBERON:0001871,6.60e-07,6 | |||
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| ||
|short_description=p6@POU3F2 | |||
}} | }} |
Latest revision as of 05:59, 20 September 2015
Short description: | p6@POU3F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_POU3F2_5end |
Coexpression cluster: | C2872_neuroepithelioma_neuroblastoma_Astrocyte_Neurons_carcinoid_astrocytoma_Neural |
Association with transcript: | -12bp_to_ENST00000425116_5end |
EntrezGene: | POU3F2 |
HGNC: | 9215 |
UniProt: | B3KTH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.83e-18 | 25 |
neuronal stem cell | 9.25e-17 | 8 |
neurectodermal cell | 8.33e-14 | 59 |
Merkel cell | 1.31e-11 | 2 |
ectodermal cell | 7.51e-11 | 72 |
neuron | 1.26e-08 | 6 |
neuroblast | 1.26e-08 | 6 |
electrically signaling cell | 1.26e-08 | 6 |
astrocyte of the cerebral cortex | 8.06e-08 | 3 |
oligodendrocyte | 2.91e-07 | 7 |
macroglial cell | 2.91e-07 | 7 |
astrocyte | 2.91e-07 | 7 |
oligodendrocyte precursor cell | 2.91e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.66e-10 | 2 |