FFCP PHASE1:Hg19::chr17:39942940..39942970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=P14923,C9JTX4 | |UniProt=P14923,C9JTX4 | ||
|association_with_transcript=0bp_to_ENST00000310706,ENST00000393931,ENST00000424457,NM_002230,NM_021991,uc002hxr.2,uc002hxs.2_5end | |association_with_transcript=0bp_to_ENST00000310706,ENST00000393931,ENST00000424457,NM_002230,NM_021991,uc002hxr.2,uc002hxs.2_5end | ||
|cluster_id=chr17:39942940..39942970,- | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_1_at_JUP_5end | |description=CAGE_peak_1_at_JUP_5end | ||
|id=chr17:39942940..39942970,- | |id=chr17:39942940..39942970,- | ||
|ontology_enrichment_celltype=CL:0000066!4.89e-46!254;CL:0002076!1.60e-13!43;CL:0000223!3.89e-13!59;CL:0000076!8.08e-12!62;CL:0000115!2.46e-10!35;CL:0002078!8.56e-10!44;CL:0002139!3.00e-09!24;CL:0000220!2.37e-08!246;CL:0002321!2.38e-08!248;CL:1000449!1.13e-07!16;CL:0002251!1.43e-07!21;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18;CL:1000497!5.37e-07!18;CL:0002518!5.37e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.89e-46!254;CL:0002076!1.60e-13!43;CL:0000223!3.89e-13!59;CL:0000076!8.08e-12!62;CL:0000115!2.46e-10!35;CL:0002078!8.56e-10!44;CL:0002139!3.00e-09!24;CL:0000220!2.37e-08!246;CL:0002321!2.38e-08!248;CL:1000449!1.13e-07!16;CL:0002251!1.43e-07!21;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18;CL:1000497!5.37e-07!18;CL:0002518!5.37e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.60e-11;42!CL:0002139;2.99e-09;24!CL:0000115;7.06e-09;36!CL:0002251;1.12e-08;20!CL:1000449;1.28e-08;15!CL:1000497;8.69e-08;17!CL:0002518;8.69e-08;17!CL:0002681;3.15e-07;12!CL:0002584;3.15e-07;12!CL:0000071;3.78e-07;18!CL:0002078;7.43e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.40e-46,253;CL:0002076,1.47e-14,42;CL:0000223,5.73e-14,58;CL:0000076,4.84e-11,63;CL:0000115,1.09e-10,36;CL:0002078,3.91e-10,45;CL:0002139,2.98e-09,24;CL:0002251,1.14e-08,20;CL:1000449,1.29e-08,15;CL:0002321,3.01e-08,250;CL:1000497,8.65e-08,17;CL:0002518,8.65e-08,17;CL:0002681,3.18e-07,12;CL:0002584,3.18e-07,12;CL:0000071,3.80e-07,18;CL:0002546,3.80e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000223;7.93e-08;58!CL:0002546;3.78e-07;18 | |||
|ontology_enrichment_disease=DOID:305!1.50e-14!106;DOID:0050687!1.74e-10!143;DOID:1749!2.55e-07!14 | |ontology_enrichment_disease=DOID:305!1.50e-14!106;DOID:0050687!1.74e-10!143;DOID:1749!2.55e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.52e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.48e-14,106;DOID:0050687,1.75e-10,143;DOID:1749,2.53e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.51e-18!169;UBERON:0000925!2.51e-18!169;UBERON:0006595!2.51e-18!169;UBERON:0000468!6.41e-14!659;UBERON:0000467!6.91e-14!625;UBERON:0001007!7.06e-14!155;UBERON:0001555!7.06e-14!155;UBERON:0007026!7.06e-14!155;UBERON:0004921!8.51e-14!129;UBERON:0004185!8.51e-14!129;UBERON:0000477!1.01e-13!286;UBERON:0000480!1.56e-13!626;UBERON:0000922!2.18e-13!612;UBERON:0002050!9.22e-13!605;UBERON:0005423!9.22e-13!605;UBERON:0000077!1.43e-12!130;UBERON:0000923!1.81e-12!604;UBERON:0005291!1.81e-12!604;UBERON:0006598!1.81e-12!604;UBERON:0002532!1.81e-12!604;UBERON:0004111!2.27e-12!241;UBERON:0001004!3.29e-12!72;UBERON:0000062!1.50e-11!511;UBERON:0001008!2.62e-11!45;UBERON:0006554!2.77e-11!44;UBERON:0003914!1.24e-10!118;UBERON:0005177!2.59e-10!107;UBERON:0000481!3.83e-10!347;UBERON:0001041!3.94e-10!98;UBERON:0000065!7.13e-10!53;UBERON:0005911!1.42e-09!82;UBERON:0003103!2.77e-09!69;UBERON:0000119!3.28e-09!312;UBERON:0003104!3.68e-09!238;UBERON:0009142!3.68e-09!238;UBERON:0001048!4.04e-09!168;UBERON:0000064!4.06e-09!219;UBERON:0008947!7.15e-09!38;UBERON:0003258!7.15e-09!38;UBERON:0000483!7.33e-09!309;UBERON:0000466!1.02e-08!126;UBERON:0009569!1.37e-08!113;UBERON:0003064!2.84e-08!37;UBERON:0000072!4.82e-08!46;UBERON:0002049!6.70e-08!79;UBERON:0007798!6.70e-08!79;UBERON:0004211!1.13e-07!16;UBERON:0001285!1.13e-07!16;UBERON:0007684!1.13e-07!16;UBERON:0003220!1.13e-07!16;UBERON:0004208!1.13e-07!16;UBERON:0002113!1.40e-07!27;UBERON:0003918!1.40e-07!27;UBERON:0005095!1.40e-07!27;UBERON:0007687!1.40e-07!27;UBERON:0000080!1.41e-07!18;UBERON:0002120!1.41e-07!18;UBERON:0004875!1.41e-07!18;UBERON:0005721!1.41e-07!18;UBERON:0005754!1.41e-07!18;UBERON:0007297!1.41e-07!18;UBERON:0006555!1.50e-07!17;UBERON:0005103!1.50e-07!17;UBERON:0000083!1.50e-07!17;UBERON:0009201!1.50e-07!17;UBERON:0004819!1.50e-07!17;UBERON:0006553!1.50e-07!17;UBERON:0003074!1.50e-07!17;UBERON:0003060!1.50e-07!17;UBERON:0000464!2.12e-07!104;UBERON:0005153!2.90e-07!37;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0004876!4.27e-07!20;UBERON:0000489!4.57e-07!32;UBERON:0000161!6.40e-07!35;UBERON:0005172!6.46e-07!55;UBERON:0005173!6.46e-07!55;UBERON:0005157!9.07e-07!51;UBERON:0000058!9.13e-07!26 | |ontology_enrichment_uberon=UBERON:0004119!2.51e-18!169;UBERON:0000925!2.51e-18!169;UBERON:0006595!2.51e-18!169;UBERON:0000468!6.41e-14!659;UBERON:0000467!6.91e-14!625;UBERON:0001007!7.06e-14!155;UBERON:0001555!7.06e-14!155;UBERON:0007026!7.06e-14!155;UBERON:0004921!8.51e-14!129;UBERON:0004185!8.51e-14!129;UBERON:0000477!1.01e-13!286;UBERON:0000480!1.56e-13!626;UBERON:0000922!2.18e-13!612;UBERON:0002050!9.22e-13!605;UBERON:0005423!9.22e-13!605;UBERON:0000077!1.43e-12!130;UBERON:0000923!1.81e-12!604;UBERON:0005291!1.81e-12!604;UBERON:0006598!1.81e-12!604;UBERON:0002532!1.81e-12!604;UBERON:0004111!2.27e-12!241;UBERON:0001004!3.29e-12!72;UBERON:0000062!1.50e-11!511;UBERON:0001008!2.62e-11!45;UBERON:0006554!2.77e-11!44;UBERON:0003914!1.24e-10!118;UBERON:0005177!2.59e-10!107;UBERON:0000481!3.83e-10!347;UBERON:0001041!3.94e-10!98;UBERON:0000065!7.13e-10!53;UBERON:0005911!1.42e-09!82;UBERON:0003103!2.77e-09!69;UBERON:0000119!3.28e-09!312;UBERON:0003104!3.68e-09!238;UBERON:0009142!3.68e-09!238;UBERON:0001048!4.04e-09!168;UBERON:0000064!4.06e-09!219;UBERON:0008947!7.15e-09!38;UBERON:0003258!7.15e-09!38;UBERON:0000483!7.33e-09!309;UBERON:0000466!1.02e-08!126;UBERON:0009569!1.37e-08!113;UBERON:0003064!2.84e-08!37;UBERON:0000072!4.82e-08!46;UBERON:0002049!6.70e-08!79;UBERON:0007798!6.70e-08!79;UBERON:0004211!1.13e-07!16;UBERON:0001285!1.13e-07!16;UBERON:0007684!1.13e-07!16;UBERON:0003220!1.13e-07!16;UBERON:0004208!1.13e-07!16;UBERON:0002113!1.40e-07!27;UBERON:0003918!1.40e-07!27;UBERON:0005095!1.40e-07!27;UBERON:0007687!1.40e-07!27;UBERON:0000080!1.41e-07!18;UBERON:0002120!1.41e-07!18;UBERON:0004875!1.41e-07!18;UBERON:0005721!1.41e-07!18;UBERON:0005754!1.41e-07!18;UBERON:0007297!1.41e-07!18;UBERON:0006555!1.50e-07!17;UBERON:0005103!1.50e-07!17;UBERON:0000083!1.50e-07!17;UBERON:0009201!1.50e-07!17;UBERON:0004819!1.50e-07!17;UBERON:0006553!1.50e-07!17;UBERON:0003074!1.50e-07!17;UBERON:0003060!1.50e-07!17;UBERON:0000464!2.12e-07!104;UBERON:0005153!2.90e-07!37;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0004876!4.27e-07!20;UBERON:0000489!4.57e-07!32;UBERON:0000161!6.40e-07!35;UBERON:0005172!6.46e-07!55;UBERON:0005173!6.46e-07!55;UBERON:0005157!9.07e-07!51;UBERON:0000058!9.13e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;8.69e-11;30!UBERON:0001008;8.69e-11;30!UBERON:0006555;1.28e-08;15!UBERON:0004819;1.28e-08;15!UBERON:0001285;1.28e-08;15!UBERON:0007684;1.28e-08;15!UBERON:0002113;3.24e-08;24!UBERON:0011143;3.24e-08;24!UBERON:0000490;3.60e-08;33!UBERON:0000065;1.45e-07;44!UBERON:0000489;1.53e-07;29!UBERON:0005911;2.56e-07;36!UBERON:0001225;3.15e-07;12!UBERON:0008987;3.15e-07;12!UBERON:0004638;3.78e-07;18!UBERON:0001986;3.78e-07;18!UBERON:0004852;3.78e-07;18!UBERON:0000353;4.11e-07;15!UBERON:0000072;4.94e-07;37 | |||
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| ||
|short_description=p1@JUP | |short_description=p1@JUP | ||
}} | }} |
Latest revision as of 07:19, 20 September 2015
Short description: | p1@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JUP_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000310706, ENST00000393931, ENST00000424457, NM_002230, NM_021991, uc002hxr.2, uc002hxs.2_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | P14923C9JTX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.40e-46 | 253 |
endo-epithelial cell | 1.47e-14 | 42 |
endodermal cell | 5.73e-14 | 58 |
squamous epithelial cell | 4.84e-11 | 63 |
endothelial cell | 1.09e-10 | 36 |
meso-epithelial cell | 3.91e-10 | 45 |
endothelial cell of vascular tree | 2.98e-09 | 24 |
epithelial cell of alimentary canal | 1.14e-08 | 20 |
epithelial cell of nephron | 1.29e-08 | 15 |
embryonic cell | 3.01e-08 | 250 |
kidney cell | 8.65e-08 | 17 |
kidney epithelial cell | 8.65e-08 | 17 |
kidney cortical cell | 3.18e-07 | 12 |
renal cortical epithelial cell | 3.18e-07 | 12 |
blood vessel endothelial cell | 3.80e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.80e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.48e-14 | 106 |
cell type cancer | 1.75e-10 | 143 |
squamous cell carcinoma | 2.53e-07 | 14 |