FFCP PHASE1:Hg19::chr22:41763274..41763318,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:41763274..41763318,+ to FFCP PHASE1:Hg19::chr22:41763274..41763318,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7008 | |EntrezGene=7008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11722 | |HGNC=11722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000406644_5end | |||
|cluster_id=chr22:41763274..41763318,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_3_at_TEF_5end | |||
|id=chr22:41763274..41763318,+ | |||
|ontology_enrichment_celltype=CL:0000840!9.63e-07!5;CL:0001029!9.63e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000037;9.96e-11;1!CL:0001024;9.96e-11;1!CL:0000840;3.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.10e-10,1;CL:0000840,2.96e-07,5;CL:0001029,2.96e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.68e-21;2!UBERON:0006222;3.75e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.52e-34!57;UBERON:0005068!3.52e-34!57;UBERON:0006241!3.52e-34!57;UBERON:0007135!3.52e-34!57;UBERON:0002616!9.09e-27!59;UBERON:0000073!1.26e-26!94;UBERON:0001016!1.26e-26!94;UBERON:0002780!1.86e-26!41;UBERON:0001890!1.86e-26!41;UBERON:0006240!1.86e-26!41;UBERON:0003080!1.28e-25!42;UBERON:0001017!2.85e-25!82;UBERON:0007023!4.03e-25!115;UBERON:0005743!7.24e-25!86;UBERON:0002020!2.46e-24!34;UBERON:0003528!2.46e-24!34;UBERON:0000955!7.59e-24!69;UBERON:0006238!7.59e-24!69;UBERON:0001893!1.18e-23!34;UBERON:0001869!1.44e-23!32;UBERON:0002346!2.67e-23!90;UBERON:0003075!1.89e-22!86;UBERON:0007284!1.89e-22!86;UBERON:0002791!1.92e-22!33;UBERON:0003056!1.46e-17!61;UBERON:0000924!4.04e-17!173;UBERON:0006601!4.04e-17!173;UBERON:0004121!2.66e-16!169;UBERON:0002619!3.94e-16!22;UBERON:0001950!1.19e-15!20;UBERON:0000956!1.04e-13!25;UBERON:0000203!1.04e-13!25;UBERON:0000153!1.34e-13!129;UBERON:0007811!1.34e-13!129;UBERON:0002308!1.64e-13!9;UBERON:0000125!1.64e-13!9;UBERON:0002420!1.95e-13!9;UBERON:0007245!1.95e-13!9;UBERON:0010009!1.95e-13!9;UBERON:0010011!1.95e-13!9;UBERON:0000454!1.95e-13!9;UBERON:0000033!2.98e-13!123;UBERON:0009663!3.13e-10!7;UBERON:0003076!1.39e-09!15;UBERON:0003057!1.39e-09!15;UBERON:0000369!1.06e-08!4;UBERON:0002435!1.06e-08!4;UBERON:0000204!1.06e-08!4;UBERON:0010082!1.06e-08!4;UBERON:0001871!1.13e-07!7;UBERON:0002298!3.08e-07!8;UBERON:0000200!4.30e-07!6;UBERON:0005383!6.08e-07!3;UBERON:0005382!6.08e-07!3;UBERON:0000064!9.99e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.23e-67;9!UBERON:0002308;1.23e-67;9!UBERON:0002420;3.65e-52;9!UBERON:0007245;3.65e-52;9!UBERON:0010009;3.65e-52;9!UBERON:0010011;3.65e-52;9!UBERON:0000454;3.65e-52;9!UBERON:0009663;6.78e-50;7!UBERON:0000369;1.14e-39;4!UBERON:0002435;1.14e-39;4!UBERON:0000204;1.14e-39;4!UBERON:0005383;2.81e-30;3!UBERON:0005382;2.81e-30;3!UBERON:0003528;1.24e-26;34!UBERON:0002020;1.24e-26;34!UBERON:0002780;2.92e-24;41!UBERON:0001890;2.92e-24;41!UBERON:0002791;8.61e-23;32!UBERON:0001869;8.26e-22;32!UBERON:0001873;7.68e-21;2!UBERON:0001875;2.15e-20;2!UBERON:0006514;2.15e-20;2!UBERON:0002148;1.05e-19;2!UBERON:0006331;1.05e-19;2!UBERON:0009662;1.05e-19;2!UBERON:0001893;1.04e-18;34!UBERON:0000349;9.89e-18;5!UBERON:0000073;1.32e-15;53!UBERON:0002616;1.32e-15;53!UBERON:0000988;1.81e-13;3!UBERON:0001874;3.08e-11;1!UBERON:0001882;3.40e-11;1!UBERON:0005403;3.40e-11;1!UBERON:0002171;9.96e-11;1!UBERON:0006518;9.96e-11;1!UBERON:0008949;9.96e-11;1!UBERON:0000101;9.96e-11;1!UBERON:0002167;9.96e-11;1!UBERON:0000955;1.10e-10;68!UBERON:0001016;6.22e-09;83!UBERON:0001017;7.05e-09;75!UBERON:0002298;3.57e-07;6!UBERON:0007023;6.12e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,1.19e-67,9;UBERON:0002308,1.19e-67,9;UBERON:0002420,4.77e-52,9;UBERON:0007245,4.77e-52,9;UBERON:0010009,4.77e-52,9;UBERON:0010011,4.77e-52,9;UBERON:0000454,4.77e-52,9;UBERON:0009663,7.10e-50,7;UBERON:0000369,1.15e-39,4;UBERON:0002435,1.15e-39,4;UBERON:0000204,1.15e-39,4;UBERON:0010082,1.15e-39,4;UBERON:0003528,2.19e-31,34;UBERON:0002020,2.19e-31,34;UBERON:0005383,2.82e-30,3;UBERON:0005382,2.82e-30,3;UBERON:0000073,6.13e-28,53;UBERON:0002616,6.13e-28,53;UBERON:0001049,2.31e-26,56;UBERON:0005068,2.31e-26,56;UBERON:0006241,2.31e-26,56;UBERON:0007135,2.31e-26,56;UBERON:0002780,4.51e-26,41;UBERON:0001890,4.51e-26,41;UBERON:0003080,4.51e-26,41;UBERON:0006240,4.51e-26,41;UBERON:0002791,2.11e-22,32;UBERON:0001869,2.11e-22,32;UBERON:0000955,4.30e-21,68;UBERON:0006238,4.30e-21,68;UBERON:0001893,4.68e-21,34;UBERON:0001873,7.70e-21,2;UBERON:0010122,7.70e-21,2;UBERON:0001875,2.26e-20,2;UBERON:0006514,2.26e-20,2;UBERON:0002148,9.60e-20,2;UBERON:0006331,9.60e-20,2;UBERON:0009662,9.60e-20,2;UBERON:0001016,3.84e-18,89;UBERON:0000349,1.56e-17,5;UBERON:0001017,1.81e-17,81;UBERON:0003075,1.81e-17,82;UBERON:0007284,1.81e-17,82;UBERON:0003056,3.93e-17,61;UBERON:0002346,1.43e-16,86;UBERON:0007023,3.12e-14,114;UBERON:0000988,1.70e-13,3;UBERON:0010371,2.26e-13,104;UBERON:0001874,3.08e-11,1;UBERON:0001882,3.41e-11,1;UBERON:0005403,3.41e-11,1;UBERON:0002171,9.05e-11,1;UBERON:0006518,9.05e-11,1;UBERON:0008949,9.05e-11,1;UBERON:0000101,9.05e-11,1;UBERON:0002167,9.05e-11,1;UBERON:0010314,4.11e-10,132;UBERON:0004121,1.62e-08,171;UBERON:0000924,1.62e-08,171;UBERON:0006601,1.62e-08,171;UBERON:0000025,1.83e-07,192;UBERON:0002298,3.46e-07,6;UBERON:0011216,4.82e-07,223 | |||
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| ||
|short_description=p3@TEF | |||
}} | }} |
Latest revision as of 21:29, 24 September 2015
Short description: | p3@TEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TEF_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -18bp_to_ENST00000406644_5end |
EntrezGene: | TEF |
HGNC: | 11722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.10e-10 | 1 |
immature conventional dendritic cell | 2.96e-07 | 5 |
common dendritic progenitor | 2.96e-07 | 5 |