FFCP PHASE1:Hg19::chrX:33147196..33147221,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000472681_5end | |||
|cluster_id=chrX:33147196..33147221,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_19_at_DMD_5end | |||
|id=chrX:33147196..33147221,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease=DOID:178!1.34e-15!1;DOID:326!1.34e-15!1;DOID:3978!1.34e-15!1;DOID:3394!1.34e-15!1;DOID:5844!1.34e-15!1;DOID:114!1.86e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!5.20e-30!2;UBERON:0002757!5.20e-30!2;UBERON:0010134!5.20e-30!2;UBERON:0002784!5.20e-30!2;UBERON:0005408!5.20e-30!2;UBERON:0001899!5.20e-30!2;UBERON:0001896!9.53e-20!3;UBERON:0005290!9.53e-20!3;UBERON:0010096!9.53e-20!3;UBERON:0003296!1.55e-15!4;UBERON:0010133!1.55e-15!4;UBERON:0006834!2.38e-15!1;UBERON:0002336!2.75e-15!1;UBERON:0001018!2.75e-15!1;UBERON:0002473!2.75e-15!1;UBERON:0005340!2.75e-15!1;UBERON:0002316!2.75e-15!1;UBERON:0003544!2.75e-15!1;UBERON:0001020!2.75e-15!1;UBERON:0005970!2.75e-15!1;UBERON:0002437!2.75e-15!1;UBERON:0005743!3.90e-15!86;UBERON:0000073!1.23e-13!94;UBERON:0001016!1.23e-13!94;UBERON:0001017!8.08e-13!82;UBERON:0000966!2.00e-12!5;UBERON:0005388!2.00e-12!5;UBERON:0001802!2.00e-12!5;UBERON:0003075!2.23e-12!86;UBERON:0007284!2.23e-12!86;UBERON:0000955!4.27e-12!69;UBERON:0006238!4.27e-12!69;UBERON:0002346!8.56e-12!90;UBERON:0007023!2.48e-11!115;UBERON:0001894!2.80e-09!7;UBERON:0006222!2.80e-09!7;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0002360!1.73e-08!2;UBERON:0000094!1.73e-08!2;UBERON:0007645!1.73e-08!2;UBERON:0001954!2.31e-08!2;UBERON:0003022!2.31e-08!2;UBERON:0002421!2.31e-08!2;UBERON:0002600!2.31e-08!2;UBERON:0000033!2.55e-08!123;UBERON:0005162!2.67e-08!2;UBERON:0000122!2.67e-08!2;UBERON:0002616!2.92e-08!59;UBERON:0003056!5.04e-08!61;UBERON:0002298!5.37e-08!8;UBERON:0000153!6.80e-08!129;UBERON:0007811!6.80e-08!129;UBERON:0004121!3.29e-07!169;UBERON:0000970!4.62e-07!20;UBERON:0000924!5.10e-07!173;UBERON:0006601!5.10e-07!173;UBERON:0002104!9.49e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0001896;2.09e-14;3!UBERON:0005290;2.09e-14;3!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0002298;7.25e-08;6!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0000970,1.42e-08,21;UBERON:0002104,1.42e-08,21;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0002346,6.09e-08,86;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0002298,7.25e-08,6;UBERON:0000020,1.27e-07,24;UBERON:0001032,1.27e-07,24;UBERON:0004456,1.27e-07,24;UBERON:0000073,2.12e-07,53;UBERON:0002616,2.12e-07,53;UBERON:0001049,4.78e-07,56;UBERON:0005068,4.78e-07,56;UBERON:0006241,4.78e-07,56;UBERON:0007135,4.78e-07,56 | |||
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|short_description=p19@DMD | |||
}} | }} |
Latest revision as of 21:55, 24 September 2015
Short description: | p19@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DMD_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -2bp_to_ENST00000472681_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
medulla oblongata | 2.09e-14 | 3 |
myelencephalon | 2.09e-14 | 3 |
future myelencephalon | 2.09e-14 | 3 |
eye | 1.42e-08 | 21 |
visual system | 1.42e-08 | 21 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
neurectoderm | 6.09e-08 | 86 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
brainstem | 7.25e-08 | 6 |
sense organ | 1.27e-07 | 24 |
sensory system | 1.27e-07 | 24 |
entire sense organ system | 1.27e-07 | 24 |
regional part of nervous system | 2.12e-07 | 53 |
regional part of brain | 2.12e-07 | 53 |
neural tube | 4.78e-07 | 56 |
neural rod | 4.78e-07 | 56 |
future spinal cord | 4.78e-07 | 56 |
neural keel | 4.78e-07 | 56 |