FFCP PHASE1:Hg19::chr1:21606082..21606114,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1889 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3146 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000357071_5end | |||
|cluster_id=chr1:21606082..21606114,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_7_at_ECE1_5end | |||
|id=chr1:21606082..21606114,- | |||
|ontology_enrichment_celltype=CL:0002139!4.90e-24!24;CL:0000115!6.30e-23!35;CL:0000222!1.57e-19!119;CL:0000071!1.19e-18!18;CL:0002546!1.19e-18!18;CL:0002078!8.53e-17!44;CL:0000359!7.02e-13!32;CL:0000183!6.35e-12!59;CL:0000680!4.85e-11!57;CL:0000056!4.85e-11!57;CL:0000355!4.85e-11!57;CL:1000413!2.72e-10!9;CL:0000187!3.43e-10!54;CL:0000213!5.41e-10!57;CL:0000215!5.41e-10!57;CL:0000192!7.38e-10!42;CL:0000514!7.38e-10!42;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0002544!2.15e-07!6;CL:0002543!3.02e-07!6;CL:0005020!6.20e-07!6;CL:0002138!6.20e-07!6;CL:0005022!6.20e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.58e-34;24!CL:0000115;7.43e-30;36!CL:0000071;1.88e-26;18!CL:0002078;3.24e-18;45!CL:1000413;2.90e-14;9!CL:0000213;3.82e-12;58!CL:0000215;3.82e-12;58!CL:0002544;4.67e-10;6!CL:0002543;7.84e-10;6!CL:0002138;2.18e-09;6!CL:0000359;6.01e-09;32!CL:0002188;9.75e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.59e-35,36;CL:0002139,2.71e-34,24;CL:0002078,6.05e-28,45;CL:0000071,1.96e-26,18;CL:0002546,1.96e-26,18;CL:0000222,9.06e-22,121;CL:0000213,6.25e-19,58;CL:0000215,6.25e-19,58;CL:1000413,2.95e-14,9;CL:0002544,4.74e-10,6;CL:0002543,7.77e-10,6;CL:0005020,2.20e-09,6;CL:0002138,2.20e-09,6;CL:0005022,2.20e-09,6;CL:0000359,3.34e-09,32;CL:0002188,1.01e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.88e-26;18!CL:0005022;2.18e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.28e-40!69;UBERON:0004872!6.90e-39!84;UBERON:0002049!1.05e-38!79;UBERON:0007798!1.05e-38!79;UBERON:0001009!1.62e-35!113;UBERON:0004111!1.56e-34!241;UBERON:0001981!2.04e-34!60;UBERON:0007500!2.04e-34!60;UBERON:0004537!2.04e-34!60;UBERON:0006965!2.04e-34!60;UBERON:0000025!4.83e-34!194;UBERON:0004535!1.99e-33!110;UBERON:0000477!6.21e-32!286;UBERON:0003914!8.82e-30!118;UBERON:0000119!7.86e-25!312;UBERON:0001637!1.73e-24!42;UBERON:0003509!1.73e-24!42;UBERON:0004572!1.73e-24!42;UBERON:0000483!2.29e-23!309;UBERON:0007023!1.36e-22!115;UBERON:0001986!1.19e-18!18;UBERON:0004638!1.19e-18!18;UBERON:0004852!1.19e-18!18;UBERON:0004573!2.15e-18!33;UBERON:0004571!2.15e-18!33;UBERON:0000490!9.37e-18!138;UBERON:0000487!3.71e-17!22;UBERON:0000467!2.01e-14!625;UBERON:0000480!2.75e-14!626;UBERON:0006914!5.37e-14!25;UBERON:0002385!2.14e-13!63;UBERON:0001015!2.14e-13!63;UBERON:0000383!2.14e-13!63;UBERON:0000468!2.72e-13!659;UBERON:0007100!3.95e-13!27;UBERON:0001134!1.25e-12!61;UBERON:0002036!1.25e-12!61;UBERON:0003082!1.25e-12!61;UBERON:0000947!1.42e-12!21;UBERON:0010191!1.42e-12!21;UBERON:0004290!1.86e-12!70;UBERON:0000948!4.12e-11!24;UBERON:0005498!4.12e-11!24;UBERON:0004140!4.12e-11!24;UBERON:0009881!4.12e-11!24;UBERON:0004141!4.12e-11!24;UBERON:0003084!4.12e-11!24;UBERON:0007005!4.12e-11!24;UBERON:0004139!4.12e-11!24;UBERON:0004291!4.12e-11!24;UBERON:0000481!1.38e-10!347;UBERON:0003915!2.72e-10!9;UBERON:0004700!2.72e-10!9;UBERON:0001917!2.72e-10!9;UBERON:0000914!1.02e-09!83;UBERON:0002329!1.02e-09!83;UBERON:0003077!1.02e-09!83;UBERON:0003059!1.02e-09!83;UBERON:0007282!1.02e-09!83;UBERON:0009618!1.02e-09!83;UBERON:0007285!1.02e-09!83;UBERON:0005256!1.62e-09!143;UBERON:0003103!4.38e-09!69;UBERON:0000475!6.22e-09!365;UBERON:0002465!1.09e-08!10;UBERON:0000486!1.52e-08!82;UBERON:0002616!1.87e-08!59;UBERON:0001049!4.32e-08!57;UBERON:0005068!4.32e-08!57;UBERON:0006241!4.32e-08!57;UBERON:0007135!4.32e-08!57;UBERON:0001473!1.13e-07!8;UBERON:0004536!1.13e-07!8;UBERON:0006558!1.13e-07!8;UBERON:0001017!2.73e-07!82;UBERON:0005743!5.83e-07!86;UBERON:0003075!7.28e-07!86;UBERON:0007284!7.28e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.88e-26;18!UBERON:0001986;1.88e-26;18!UBERON:0004852;1.88e-26;18!UBERON:0000487;7.71e-25;22!UBERON:0006914;6.02e-21;25!UBERON:0000055;2.22e-20;65!UBERON:0001637;8.60e-20;42!UBERON:0003509;8.60e-20;42!UBERON:0004572;8.60e-20;42!UBERON:0007500;2.00e-19;56!UBERON:0001981;2.00e-19;56!UBERON:0004537;2.00e-19;56!UBERON:0002049;1.17e-15;75!UBERON:0007798;1.17e-15;75!UBERON:0004573;1.99e-15;33!UBERON:0004571;1.99e-15;33!UBERON:0003914;2.21e-14;74!UBERON:0003915;2.90e-14;9!UBERON:0004700;2.90e-14;9!UBERON:0001917;2.90e-14;9!UBERON:0007100;4.73e-14;25!UBERON:0000490;3.33e-13;33!UBERON:0001009;1.11e-11;112!UBERON:0004535;1.25e-11;109!UBERON:0000948;2.96e-11;22!UBERON:0000947;8.40e-11;21!UBERON:0010191;8.40e-11;21!UBERON:0002465;4.10e-10;10!UBERON:0000025;1.40e-09;93!UBERON:0001473;1.56e-08;8!UBERON:0004536;1.56e-08;8!UBERON:0006558;1.56e-08;8!UBERON:0001638;6.27e-08;9!UBERON:0003920;6.27e-08;9!UBERON:0004582;6.27e-08;9 | |||
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| |||
|short_description=p7@ECE1 | |||
}} |
Latest revision as of 02:48, 25 September 2015
Short description: | p7@ECE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ECE1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -40bp_to_ENST00000357071_5end |
EntrezGene: | ECE1 |
HGNC: | 3146 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.59e-35 | 36 |
endothelial cell of vascular tree | 2.71e-34 | 24 |
meso-epithelial cell | 6.05e-28 | 45 |
blood vessel endothelial cell | 1.96e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.96e-26 | 18 |
mesodermal cell | 9.06e-22 | 121 |
lining cell | 6.25e-19 | 58 |
barrier cell | 6.25e-19 | 58 |
endothelial cell of artery | 2.95e-14 | 9 |
aortic endothelial cell | 4.74e-10 | 6 |
vein endothelial cell | 7.77e-10 | 6 |
lymphangioblast | 2.20e-09 | 6 |
endothelial cell of lymphatic vessel | 2.20e-09 | 6 |
vascular lymphangioblast | 2.20e-09 | 6 |
vascular associated smooth muscle cell | 3.34e-09 | 32 |
glomerular endothelial cell | 1.01e-07 | 5 |