FFCP PHASE1:Hg19::chr7:110731175..110731191,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17200 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000464835_5end | |||
|cluster_id=chr7:110731175..110731191,+ | |||
|coexpression_cluster_id=C1605 | |||
|description=CAGE_peak_1_at_LRRN3_5end | |||
|id=chr7:110731175..110731191,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.25e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-34!115;UBERON:0001049!2.64e-31!57;UBERON:0005068!2.64e-31!57;UBERON:0006241!2.64e-31!57;UBERON:0007135!2.64e-31!57;UBERON:0002616!2.62e-28!59;UBERON:0001017!1.21e-27!82;UBERON:0002780!5.70e-26!41;UBERON:0001890!5.70e-26!41;UBERON:0006240!5.70e-26!41;UBERON:0003080!1.11e-25!42;UBERON:0005743!1.39e-25!86;UBERON:0000073!1.59e-25!94;UBERON:0001016!1.59e-25!94;UBERON:0000955!5.68e-24!69;UBERON:0006238!5.68e-24!69;UBERON:0002020!5.65e-23!34;UBERON:0003528!5.65e-23!34;UBERON:0003075!7.11e-23!86;UBERON:0007284!7.11e-23!86;UBERON:0001893!8.34e-23!34;UBERON:0001869!3.12e-22!32;UBERON:0002791!3.32e-22!33;UBERON:0002346!4.73e-22!90;UBERON:0000956!5.15e-18!25;UBERON:0000203!5.15e-18!25;UBERON:0004121!1.22e-17!169;UBERON:0000153!1.99e-17!129;UBERON:0007811!1.99e-17!129;UBERON:0000924!2.28e-17!173;UBERON:0006601!2.28e-17!173;UBERON:0003056!3.93e-17!61;UBERON:0000033!2.90e-16!123;UBERON:0002619!5.25e-16!22;UBERON:0001950!9.22e-15!20;UBERON:0000475!4.03e-08!365;UBERON:0003076!5.90e-07!15;UBERON:0003057!5.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.59e-24;32!UBERON:0002791;1.32e-23;32!UBERON:0003528;1.55e-23;34!UBERON:0002020;1.55e-23;34!UBERON:0001893;2.97e-23;34!UBERON:0002780;4.31e-22;41!UBERON:0001890;4.31e-22;41!UBERON:0000956;3.73e-21;25!UBERON:0000203;3.73e-21;25!UBERON:0000073;1.17e-19;53!UBERON:0002616;1.17e-19;53!UBERON:0002619;9.35e-19;22!UBERON:0001950;2.83e-17;20!UBERON:0001017;5.87e-13;75!UBERON:0000955;7.45e-13;68!UBERON:0001016;1.28e-11;83!UBERON:0007023;4.96e-11;114!UBERON:0002420;1.35e-07;9!UBERON:0007245;1.35e-07;9!UBERON:0010009;1.35e-07;9!UBERON:0010011;1.35e-07;9!UBERON:0000454;1.35e-07;9!UBERON:0000125;2.43e-07;9!UBERON:0002308;2.43e-07;9!UBERON:0011216;3.06e-07;132!UBERON:0000178;4.43e-07;15!UBERON:0000179;4.43e-07;15!UBERON:0000463;4.43e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.35e-36,114;UBERON:0001049,9.05e-36,56;UBERON:0005068,9.05e-36,56;UBERON:0006241,9.05e-36,56;UBERON:0007135,9.05e-36,56;UBERON:0000073,5.80e-34,53;UBERON:0002616,5.80e-34,53;UBERON:0001017,1.02e-30,81;UBERON:0002780,1.41e-30,41;UBERON:0001890,1.41e-30,41;UBERON:0003080,1.41e-30,41;UBERON:0006240,1.41e-30,41;UBERON:0001016,2.25e-30,89;UBERON:0003075,6.80e-28,82;UBERON:0007284,6.80e-28,82;UBERON:0002346,3.53e-27,86;UBERON:0000955,5.11e-27,68;UBERON:0006238,5.11e-27,68;UBERON:0003528,5.19e-27,34;UBERON:0002020,5.19e-27,34;UBERON:0001893,8.25e-27,34;UBERON:0001869,3.96e-26,32;UBERON:0002791,9.44e-26,32;UBERON:0010371,5.00e-23,104;UBERON:0003056,9.42e-22,61;UBERON:0000956,4.12e-21,25;UBERON:0000203,4.12e-21,25;UBERON:0010314,5.23e-20,132;UBERON:0004121,1.69e-19,171;UBERON:0000924,1.69e-19,171;UBERON:0006601,1.69e-19,171;UBERON:0002619,1.01e-18,22;UBERON:0001950,3.04e-17,20;UBERON:0011216,5.08e-13,223;UBERON:0000025,7.30e-08,192;UBERON:0002420,1.32e-07,9;UBERON:0007245,1.32e-07,9;UBERON:0010009,1.32e-07,9;UBERON:0010011,1.32e-07,9;UBERON:0000454,1.32e-07,9;UBERON:0000125,2.40e-07,9;UBERON:0002308,2.40e-07,9;UBERON:0000178,3.55e-07,15;UBERON:0000179,3.55e-07,15;UBERON:0000463,3.55e-07,15;UBERON:0003076,7.77e-07,15;UBERON:0003057,7.77e-07,15 | |||
|phase1_expression=3.99692434395225,5.78071414505655,4.22863212287913,5.00366491765652,3.12872766099101,0.872338524100369,0,0,0,0.245733936501509,0,0,0,11.0152054134441,7.95353701746998,4.03395087871065,3.01347264011988,5.84248072309899,2.92759679274304,1.23121058076788,0.204000691244253,0.940364164434263,65.834277040143,25.5955174886293,63.022405076591,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0.553995408531877,0,1.08505435357926,0.223915474239924,0.971680998056939,0.515151135268373,0,0,0,0,0,0,0,0,0,0,1.29096936716765,0,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,2.42159801053347,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,4.52432471261816,1.17903228824749,1.43921049299656,69.5495820825221,0,0.473447805734733,1.94826728407911,20.3881136099868,0,0,0,25.618263945135,17.2978932254638,548.235973948656,477.532830733946,774.35384508406,34.1059095272739,60.7317679763649,63.7666695210358,144.129483911304,3.44898444241729,10.9960782554442,17.2053390573262,16.8839669591771,19.5325036156926,28.5135613334512,32.3736506017211,41.3396754028771,14.9916871862815,17.2847393992132,4.92676798152628,5.24177532384304,0.267440195783507,6.37227377084316,0,0,0.639312809217652,1.0843174571537,0,0.144846518960824,1.5905718941022,0,8.88627281342238,4.43458794925128,8.34430464084697,11.395179568301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,70.0730451890399,1.51956613997496,1.98613771219828,0,0.354668382198357,2.80338800071154,2.1349799145941,1.72667283892012,5.60179863719579,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0.312160076830321,1.1409436430889,0,0.117434498643765,0.161872944368132,0.140450806702248,1.83738754129404,1.22834317311768,7.64610780700664,24.9480600029231,8.15980866619238,0,0.718618141816238,1.5150250255866,0.625592599359821,2.21651292387346,2.19488810440419,0.612975591598039,17.878329009885,0.567160915800105,2.15267562826634,5.97960688691989,2.96704661623387,0.300091096084402,0.103052529238439,1.54584324027377,2.23340227597908,2.02531598689519,0.876933046450788,0.757301322732344,1.38074847963449,1.2931684545505,4.26011511019937,5.23910910783729,3.89989362314122,0,0.545492241181669,0,0.365921118388786,0.265059536642971,1.74290914304278,4.76840853070704,1.51392510525377,3.6497735907583,6.25798129319264,4.5026865673502,0,45.043689019102,33.9283356384705,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,1.77236972004421,0,0.122988438543114,1.3725424823882,0,0,0.100528972411631,0,0,0,0,10.3178060427818,4.46153038096122,0,0,0,0,0,0,0,0,0,1.17587489739202,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.507983154337352,0,0,0,0.719792448923265,0,1.71495859578347,0.448524337381443,4.79556075716608,0.80672114403045,2.32689088364,0,0,0.531876233169741,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,2.39624855491583,1.14861935834114,0,1.88215698667853,0.205476322550383,0,0,2.1673383622212,0.431255149719035,1.02674429023799,73.9415356487368,58.5629342359298,14.6924874427762,17.0866590641036,21.6899175562076,0,0,0,4.78496817704646,7.50255781589516,0.271265023699736,0.207970861530807,4.99601168632053,0.630809660135739,0.117141414992713,3.61135319673263,0,7.24311499047534,0,0.184369168541703,1.65078867489357,0.195801157462741,0.343143423810856,11.9925455151275,7.76571122947021,2.98837161849644,0,0,0,0.744323423456331,1.07423381301644,1.40330047216537,0.128139149255701,2.04682899626681,1.93024705372329,0,0.925258162815933,1.06537035187876,0.164254312027618,1.55776328755086,0.116210378459959,0,0,0,0.229628896329213,1.0925470080403,1.31124414959424,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0.0915694648183434,0.495056999523528,0.574265537996172,1.30012049207304,0,1.16004861950546,0.616194468458578,1.38153307253517,0.689182862422653,2.36324538710202,0.290033387828457,0.426133137080504,0.623224249527161,0,0,0,0,0.929691098594572,3.1481234683064,0.6970372701606,2.15623506123262,1.06461206063404,1.73986598415015,8.52491407878032,3.2918723950658,1.86079184679834,3.79655309662471,0.38126038784765,0,1.28381696410176,0.318203247925937,0,0.899362287916574,0.54907405947211,0.353437207037059,3.23491970517306,0,0.421258456238981,0,3.1682753652067,1.05650146756755,2.32049849393576,0.282810863907425,0,0,5.30751180192976,18.8533880659118,0,1.31178950409327,8.72514620939627,1.8589409885985,0.563391205064483,1.86434757865267,0.589494246078727,11.7701446988813,4.61189383291777,3.16661452946496,0.987884678879706,0,0.349934720244983,0,0.670302275535787,0,4.70719003883896,0,0,0,0,4.05958087385735,5.35246044999663,2.84823593587081,11.1968934465161,9.87269455406866,7.13320642311989,4.86028293514303,3.96562588147135,3.52519434720661,0,0,0,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,6.15436994738562,7.57275899732753,0,0,0,6.88588442577902,22.5730570454095,0,0,0,0.890894042497916,0,41.7542012061845,31.9319575251864,0,0,0,0.19924798825107,4.42054264849836,2.77126022639704,0.20453736500431,0.615424027305347,24.8831670129446,0,0,0,0.690503839458535,9.57932369387759,0,12.6013256992378,35.6229496941509,21.9575177801314,0,0,0.724999575434793,0,0,0,6.55012409158783,1.16641845353302,0.173624994933292,29.2294657318567,53.6654151883065,45.774520895125,42.7941735933839,18.915047613027,18.6477587580877,0,0,4.77091602723542,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,2.06617552674492,0,0,0,58.2085440906225,0,1.41532103205343,6.11030144933625,8.30259160305741,6.54888876416465,7.30953646538188,5.99870083528026,3.21031058919516,22.7236512353579,3.83155057352899,0,0.242780379534093,3.94584402849391,10.8891644443797,84.4760822100153,2.52746318513952,0.300646838828985,0,0,0,0,0,0,0,0,0,0,4.19344003780872,0.343972064943233,0,0.0730893170861856,0,1.16386819786103,0.176512253383001,14.9147288915151,0,0,53.8774873584528,0,0,0.213452994739353,40.3615411355903,0,1.83258553865465,0,0,0,0,0,0,0,1.15580235960608,23.4163912596818,11.2262410691434,0,0,25.7629607193728,25.9732633183196,7.10397314436219,2.15361907373044,1.19807400299395,3.43380838509257,3.12440040418622,5.1059439089912,9.00749708856009,0,0,0,0,0.196854963029498,0,38.9662548006559,29.6923425323235,0.321506296930038,0.137539436597234,0,0,0,33.1692579352815,0,0.472834243795189,0.891727998294968,0,0,0,12.1498205483472,1.32418394073086,0,0,0.864221491201268,1.63293680054705,0,0.082092520749339,3.23737241392301,0.113312091520126,1.61207457045891,0,19.263160497871,20.2315880666316,0,0,6.62081957919707,11.0043013569766,18.2265184352766,9.92332043623902,0,0.60896299190448,0,21.2166943314095,46.3776303941995,22.0568815269692,10.1640515520039,0,58.4804998778211,49.4206372852951,43.9420166779814,13.1884115008716,13.7552023905697,9.62494245591443,0,0,0.303298235083296,0,0,3.27834434064817,37.8243884674254,0.149254802886874,0.233713309847224,0.554805861502613,2.84104507912634,1.0062716070103,0,0,0.302461847526478,1.24349760466224,0.295710299979268,2.54874827461924,3.14862178514523,1.70789252563885,0,2.12673371646396,3.65221543268214,0,0,0.813741466409323,6.36470307208958,1.07410557042488,0.928067519756987,2.3885753321917,0.400027764663154,1.03018711554838,1.34699795506368,1.26184898228651,0,0,0.782982875895635,0,1.62065732026684,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,40.3714633563054,0,0.132864840313363,0,0.982829546539238,0,0,72.7954120911945,0,0,0,0.184105950251841,0,4.97661808026378,1.66262682694747,22.9666848274932,0,32.2168432666441,0,15.0928193272195,1.36329340684902,0,1.90802610392051,0,24.0171224485641,7.40619481750436,17.7622376864856,36.8675752053678,76.5161512158159,28.4148269121729,33.8442000997246,86.2085201078276,18.0500428931609,29.8729944418925,1.42769420259154,0,0,0,0,0,0.690359926060101,2.18807844327902,1.88025820873143,0,0,0,0,0,27.4877969396866,42.1782173251478,42.1641064862416,28.8541936382276,60.1672289920041,5.48257766857182,1.48863353516788,0,0,3.74991285114801,9.41594422212707,18.2089681270989,11.1554473762136,2.39496399439125,0,0,22.226102683424,24.1386078975656,0,0,12.8728672274843,50.4341043630366,1.12108865325516,12.7842220871329,0.431855182437243,0,4.28859265059938,0,0,1.21700790611806,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0.473328002922261,1.36341447614652,3.38709640152743,0,0,0,0,0,0,4.53200186031526,1.95059333026869,1.1598144313382,3.39997695141398,0,13.7276034861344,1.78380136166353,0,0.549702583727146,0,1.85217979459067,3.93407208907123,0,0.490296643507811,0,9.61911488863232,10.9907168121022,36.7710482997558,5.26774055532232,1.2217909337381,3.15843651070528,0,0,0,0,1.46067277649303,3.66983426723633,5.8769229092095,14.3572121595798,22.5731747433837,102.542412229989,20.1030199395852,3.34795516350076,0.462175628631418,0.432626562123789,4.28965844439268,19.6678029534652,0.506794004045748,0,0,0,0,44.7094319487612,15.005991288746,32.3376081388924,17.0664443172127,1.70587185520785,21.6638632632004,18.8599616721138,16.3256498598106,0,4.07341812980255,17.5841954393651,0.870866991587845,0.684466602170562,3.43495470374396,0.573777643141411,3.32660356546013,0,0,0,0,0,0.244482888365733,5.2896503181046,0,7.84967795005002,0 | |||
|short_description=p1@LRRN3 | |||
}} |
Latest revision as of 03:45, 25 September 2015
Short description: | p1@LRRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRN3_5end |
Coexpression cluster: | C1605_CD4_temporal_occipital_duodenum_Neural_mycosis_medial |
Association with transcript: | 25bp_to_ENST00000464835_5end |
EntrezGene: | LRRN3 |
HGNC: | 17200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data