FFCP PHASE1:Hg19::chr17:46692198..46692237,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46692198..46692237,- to FFCP PHASE1:Hg19::chr17:46692198..46692237,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3218 | |EntrezGene=3218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |HGNC=5119 | ||
|TSSclassifier=strong | |||
|UniProt=P17481,Q8N8T3 | |UniProt=P17481,Q8N8T3 | ||
|association_with_transcript=63bp_to_NM_024016,uc002inw.2_5end | |||
|cluster_id=chr17:46692198..46692237,- | |||
|coexpression_cluster_id=C3646 | |||
|description=CAGE_peak_12_at_HOXB8_5end | |||
|id=chr17:46692198..46692237,- | |||
|ontology_enrichment_celltype=CL:1000497!4.31e-09!18;CL:0002518!4.31e-09!18;CL:1000612!1.94e-08!7;CL:1000746!1.94e-08!7;CL:1000449!3.54e-08!16;CL:0002681!4.06e-08!13;CL:0002584!4.06e-08!13;CL:0000650!7.55e-08!3;CL:1000618!7.55e-08!3;CL:1001318!7.55e-08!3;CL:0002173!7.55e-08!3;CL:1000500!7.55e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002188;8.68e-10;5!CL:1000746;3.10e-07;7!CL:1000612;3.10e-07;7!CL:0002545;9.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.11e-09,5;CL:1000746,3.68e-07,7;CL:1000612,3.68e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.95e-34;3!UBERON:0003057;1.95e-34;3!UBERON:0007297;2.22e-23;2!UBERON:0005754;1.40e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;3.26e-12;1!DOID:3910;4.82e-07;2!DOID:4074;9.80e-07;2!DOID:4905;9.80e-07;2!DOID:3350;9.80e-07;2!DOID:3498;9.80e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.20e-12,1;DOID:3910,4.83e-07,2;DOID:3350,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000489!1.32e-26!32;UBERON:0002113!6.74e-18!27;UBERON:0003918!6.74e-18!27;UBERON:0005095!6.74e-18!27;UBERON:0007687!6.74e-18!27;UBERON:0006554!1.75e-13!44;UBERON:0001008!4.49e-13!45;UBERON:0002417!2.40e-12!61;UBERON:0000916!2.40e-12!61;UBERON:0005177!1.47e-11!107;UBERON:0000080!1.71e-11!18;UBERON:0002120!1.71e-11!18;UBERON:0004875!1.71e-11!18;UBERON:0005721!1.71e-11!18;UBERON:0005754!1.71e-11!18;UBERON:0007297!1.71e-11!18;UBERON:0000058!6.20e-11!26;UBERON:0003103!2.05e-10!69;UBERON:0004876!4.07e-10!20;UBERON:0006555!8.34e-10!17;UBERON:0005103!8.34e-10!17;UBERON:0000083!8.34e-10!17;UBERON:0009201!8.34e-10!17;UBERON:0004819!8.34e-10!17;UBERON:0006553!8.34e-10!17;UBERON:0003074!8.34e-10!17;UBERON:0003060!8.34e-10!17;UBERON:0003887!1.58e-09!21;UBERON:0009569!1.95e-09!113;UBERON:0005172!5.36e-09!55;UBERON:0005173!5.36e-09!55;UBERON:0002240!7.11e-09!3;UBERON:0006947!1.01e-08!3;UBERON:0004054!1.01e-08!3;UBERON:0005174!1.29e-08!5;UBERON:0001137!1.29e-08!5;UBERON:0000074!1.94e-08!7;UBERON:0001229!1.94e-08!7;UBERON:0001230!1.94e-08!7;UBERON:0005749!1.94e-08!7;UBERON:0004199!1.94e-08!7;UBERON:0004209!1.94e-08!7;UBERON:0004198!1.94e-08!7;UBERON:0004211!3.54e-08!16;UBERON:0001285!3.54e-08!16;UBERON:0007684!3.54e-08!16;UBERON:0003220!3.54e-08!16;UBERON:0004208!3.54e-08!16;UBERON:0001225!4.06e-08!13;UBERON:0008987!4.06e-08!13;UBERON:0003567!7.55e-08!3;UBERON:0003838!7.55e-08!3;UBERON:0005169!7.55e-08!3;UBERON:0002321!7.55e-08!3;UBERON:0005215!7.55e-08!3;UBERON:0002303!7.55e-08!3;UBERON:0002319!7.55e-08!3;UBERON:0003586!7.92e-08!5;UBERON:0003064!1.51e-07!37;UBERON:0003886!2.16e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.95e-34;3!UBERON:0005174;1.95e-34;3!UBERON:0001137;1.95e-34;3!UBERON:0006947;3.85e-34;3!UBERON:0004054;3.85e-34;3!UBERON:0005904;8.55e-26;4!UBERON:0000058;2.74e-18;10!UBERON:0001000;1.40e-12;1!UBERON:0000998;1.40e-12;1!UBERON:0001301;1.40e-12;1!UBERON:0006868;1.40e-12;1!UBERON:0005352;1.40e-12;1!UBERON:0003135;9.12e-10;11!UBERON:0000489;1.40e-09;29!UBERON:0000074;3.10e-07;7!UBERON:0001229;3.10e-07;7!UBERON:0004903;4.82e-07;2!UBERON:0002173;4.82e-07;2!UBERON:0002186;4.82e-07;2!UBERON:0005800;9.80e-07;2!UBERON:0001515;9.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.11e-34,3;UBERON:0005174,1.11e-34,3;UBERON:0001137,1.11e-34,3;UBERON:0006947,5.40e-34,3;UBERON:0004054,5.40e-34,3;UBERON:0005904,1.10e-25,4;UBERON:0000058,1.09e-20,19;UBERON:0000080,7.40e-20,9;UBERON:0002120,7.40e-20,9;UBERON:0004875,7.40e-20,9;UBERON:0005721,7.40e-20,9;UBERON:0005754,7.40e-20,9;UBERON:0007297,7.40e-20,9;UBERON:0000489,5.03e-17,31;UBERON:0004876,2.64e-16,11;UBERON:0003887,5.71e-15,12;UBERON:0005103,5.26e-13,8;UBERON:0000083,5.26e-13,8;UBERON:0009201,5.26e-13,8;UBERON:0006553,5.26e-13,8;UBERON:0003074,5.26e-13,8;UBERON:0003060,5.26e-13,8;UBERON:0001301,1.25e-12,1;UBERON:0001000,1.57e-12,1;UBERON:0005352,1.57e-12,1;UBERON:0000998,1.96e-12,1;UBERON:0006868,1.96e-12,1;UBERON:0003135,9.98e-10,11;UBERON:0003103,2.08e-07,68;UBERON:0003076,2.13e-07,15;UBERON:0003057,2.13e-07,15;UBERON:0010532,3.68e-07,7;UBERON:0000074,3.68e-07,7;UBERON:0001229,3.68e-07,7;UBERON:0001230,3.68e-07,7;UBERON:0003220,3.68e-07,7;UBERON:0005749,3.68e-07,7;UBERON:0004199,3.68e-07,7;UBERON:0004209,3.68e-07,7;UBERON:0004198,3.68e-07,7;UBERON:0004903,4.83e-07,2;UBERON:0002173,4.83e-07,2;UBERON:0002186,4.83e-07,2;UBERON:0002113,5.08e-07,26;UBERON:0003918,5.08e-07,26;UBERON:0011143,5.08e-07,26;UBERON:0005095,5.08e-07,26;UBERON:0007687,5.08e-07,26;UBERON:0006555,9.21e-07,16;UBERON:0004819,9.21e-07,16 | |||
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| ||
|short_description=p12@HOXB8 | |||
}} | }} |
Latest revision as of 07:34, 25 September 2015
Short description: | p12@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HOXB8_5end |
Coexpression cluster: | C3646_spinal_alveolar_glioblastoma_somatostatinoma_Endothelial_rhabdomyosarcoma_nonsmall |
Association with transcript: | 63bp_to_NM_024016, uc002inw.2_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | P17481Q8N8T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.11e-09 | 5 |
glomerular cell | 3.68e-07 | 7 |
kidney corpuscule cell | 3.68e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.20e-12 | 1 |
lung adenocarcinoma | 4.83e-07 | 2 |
mesenchymal cell neoplasm | 8.06e-07 | 2 |