FFCP PHASE1:Mm9::chr7:107376134..107376145,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:107376134..107376145,+ to FFCP PHASE1:Mm9::chr7:107376134..107376145,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70974 | |EntrezGene=70974 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CAA7 | |UniProt=Q8CAA7 | ||
|association_with_transcript=17bp_to_NM_027629,uc009imr.2,uc012fpz.1,uc012fqa.1_5end | |||
|cluster_id=chr7:107376134..107376145,+ | |||
|description=CAGE_peak_5_at_Pgm2l1_5end | |||
|id=chr7:107376134..107376145,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.26e-12!23;CL:0000337!2.26e-12!23;CL:0000540!1.88e-09!33;CL:0000047!1.88e-09!33;CL:0000031!1.88e-09!33;CL:0000404!1.88e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.51e-20,23;CL:0000337,2.51e-20,23;CL:0000540,3.25e-12,33;CL:0000047,3.25e-12,33;CL:0000031,3.25e-12,33;CL:0000404,3.25e-12,33;CL:0000393,2.08e-09,39;CL:0000211,2.08e-09,39;CL:0002319,5.37e-08,43;CL:0000221,1.09e-07,44;CL:0000133,1.09e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.72e-16!52;UBERON:0005068!3.72e-16!52;UBERON:0006241!3.72e-16!52;UBERON:0007135!3.72e-16!52;UBERON:0002346!1.32e-15!71;UBERON:0003075!1.32e-15!71;UBERON:0007284!1.32e-15!71;UBERON:0001017!1.67e-15!73;UBERON:0005743!1.67e-15!73;UBERON:0000033!3.17e-15!63;UBERON:0000073!7.04e-15!75;UBERON:0001016!7.04e-15!75;UBERON:0000955!1.91e-14!50;UBERON:0006238!1.91e-14!50;UBERON:0002616!2.75e-14!49;UBERON:0002020!4.03e-13!34;UBERON:0004121!5.78e-13!102;UBERON:0000924!5.78e-13!102;UBERON:0006601!5.78e-13!102;UBERON:0003056!8.72e-13!49;UBERON:0003080!1.18e-11!40;UBERON:0007811!3.35e-11!86;UBERON:0002780!4.23e-11!39;UBERON:0001890!4.23e-11!39;UBERON:0006240!4.23e-11!39;UBERON:0000153!4.63e-10!94;UBERON:0002791!6.07e-10!29;UBERON:0003528!6.07e-10!29;UBERON:0001893!6.07e-10!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.21e-32,54;UBERON:0001049,3.48e-29,52;UBERON:0005068,3.48e-29,52;UBERON:0006241,3.48e-29,52;UBERON:0007135,3.48e-29,52;UBERON:0002346,6.28e-28,64;UBERON:0003075,6.28e-28,64;UBERON:0007284,6.28e-28,64;UBERON:0001017,2.50e-26,73;UBERON:0001016,2.94e-25,75;UBERON:0002020,5.77e-25,34;UBERON:0010371,7.41e-23,73;UBERON:0004121,4.92e-22,95;UBERON:0000924,4.92e-22,95;UBERON:0006601,4.92e-22,95;UBERON:0002616,5.22e-22,46;UBERON:0000955,2.53e-21,47;UBERON:0006238,2.53e-21,47;UBERON:0003056,1.40e-19,49;UBERON:0003080,9.67e-19,40;UBERON:0003528,1.34e-18,29;UBERON:0002791,1.34e-18,29;UBERON:0001893,1.34e-18,29;UBERON:0002780,1.08e-17,39;UBERON:0001890,1.08e-17,39;UBERON:0006240,1.08e-17,39;UBERON:0010314,1.74e-15,92;UBERON:0000956,4.13e-12,21;UBERON:0001869,4.13e-12,21;UBERON:0000203,4.13e-12,21;UBERON:0002619,4.61e-12,17;UBERON:0003076,2.73e-11,12;UBERON:0003057,2.73e-11,12;UBERON:0002021,4.02e-10,10;UBERON:0000411,4.02e-10,10;UBERON:0001950,4.02e-10,10;UBERON:0002240,5.57e-09,6;UBERON:0005174,5.57e-09,6;UBERON:0001137,5.57e-09,6;UBERON:0001948,4.19e-08,5;UBERON:0002315,4.19e-08,5;UBERON:0002420,7.09e-08,8;UBERON:0007245,7.09e-08,8;UBERON:0010009,7.09e-08,8;UBERON:0010011,7.09e-08,8;UBERON:0000454,7.09e-08,8;UBERON:0000025,3.42e-07,114;UBERON:0000369,5.50e-07,5;UBERON:0002435,5.50e-07,5;UBERON:0000204,5.50e-07,5;UBERON:0010082,5.50e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0,0.202475267389826,1.39912375625629,0.315462165358238,0.411343300817216,0.42438965179803,1.44573593256819,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0,0.286533439938757,0,4.65327859977075,5.81890077199236,3.1691570175309,0,0,0.449949858640699,0,0,0,0,0.311068836925433,1.35005938331691,0.420649922702764,5.14171771926846,3.97563373712904,1.34739879136449,1.43768206527355,1.83843757322004,6.60695285996332,4.72443150915195,3.5329502648936,4.3522474950964,5.21479568533735,4.16730696445408,2.51264699101243,0.56276261003168,5.19514042441154,6.77645746589436,7.83044244395066,5.96478226640962,0.075726193333184,0.226714680320357,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.845060518660083,0,0,0,0,0,0,0.68510327831436,0,0.593768556259299,0.520455980298408,0,0,0.301445281105245,0,0.251333182659351,0.247194967734374,0.144599356919912,1.76922110389975,0.323533699894818,0.220841518460394,0,0,5.85561594023094,6.91174132484402,0,0.718890747035522,0,0.508280908292259,4.19413790333504,1.83000241127451,2.63874139437015,3.99795936442236,3.3243009452943,5.40248915854856,2.92034273521964,0.611036183101898,0.373220911830279,0.252722758433675,0.210441855886474,0,1.14951052216736,1.26043490863744,1.05493372485001,1.02054748726992,0.896796041993948,1.3118241438362,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,0,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,0,1.13665399758237,0.621377317606506,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,1.47202963994889,1.64647379806855,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0.964887042726734,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0,0.318909537314974,0.655453258862952,0.863424909329478,0.578596234326046,0,0.54390568381871,0,0.551873492609465,4.97706828962155,4.57125577709592,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,0.430846795465598,0,0,0.849229592366497,0,0.292255857911312,0.395287777946524,0.642642632843614,0.567760340833074,0,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0.388076051348264,0.857348140126369,1.41872186913819,0,1.31639216481697,0.304464949114599,0,0.63549621259146,0.220528398054962,0.49465875882444,0.161464426695906,0,0.238744688006273,0.164140899745061,0.874442509889552,1.8542530201051,0,0,0.555583582109135,0.188368457004691,0.546776910884101,0.228778173206523,2.03974115992626,0.139951452323658,0.690999869022119,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,0.621339313086926,5.07323644815771,0.598066184175915,0.165458490457098,0.777804753376191,0,1.01373675294467,0.352071715937262,0.2604087696879,0.943734099831398,2.65742532908607,2.59227005632079,0.948033361884535,0,0.205421914329655,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.295379054349154,0.100966449948148,0.762068066549998,0.403304740547362,0.487289403698762,0.865906574762965,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,6.21227026878773,4.60325236507177,2.29158205375759,5.499301834998,0,2.2661816921691,3.37511250115903,2.2516060161211,2.71885445390523,4.65984280576638,0.93408612825759,1.19707462020309,1.53660245178721,0.729320151204882,1.04806581313991,0.919217542250071,1.11123363900808,0.824140228955577,0.962757628775446,0.505394423527595,0.50695859978048,0.943131706930381,0.936415074698824,1.02440243847791,0.976402972245426,1.42888107384922,0.579421629724277,0.77163688185482,0.412085900803307,0,3.42869252385415,0.887379030796687,0.715308569841963,0.436039249896986,0.846984423737976,1.01537529470012,1.46342378298218,0.526139422875686,1.49384525230448,0.561142271657738,0.355905054372522,0.492522411877817,1.63692417267876,0.619747364743864,1.73615949883027,1.24905288968973,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0,0.202475267389826,1.39912375625629,0.315462165358238,0.411343300817216,0.42438965179803,1.44573593256819,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0,0.286533439938757,0,4.65327859977075,5.81890077199236,3.1691570175309,0,0,0.449949858640699,0,0,0,0,0.311068836925433,1.35005938331691,0.420649922702764,5.14171771926846,3.97563373712904,1.34739879136449,1.43768206527355,1.83843757322004,6.60695285996332,4.72443150915195,3.5329502648936,4.3522474950964,5.21479568533735,4.16730696445408,2.51264699101243,0.56276261003168,5.19514042441154,6.77645746589436,7.83044244395066,5.96478226640962,0.075726193333184,0.226714680320357,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.845060518660083,0,0,0,0,0,0,0.68510327831436,0,0.593768556259299,0.520455980298408,0,0,0.301445281105245,0,0.251333182659351,0.247194967734374,0.144599356919912,1.76922110389975,0.323533699894818,0.220841518460394,0,0,5.85561594023094,6.91174132484402,0,0.718890747035522,0,0.508280908292259,4.19413790333504,1.83000241127451,2.63874139437015,3.99795936442236,3.3243009452943,5.40248915854856,2.92034273521964,0.611036183101898,0.373220911830279,0.252722758433675,0.210441855886474,0,1.14951052216736,1.26043490863744,1.05493372485001,1.02054748726992,0.896796041993948,1.3118241438362,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,0,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,0,1.13665399758237,0.621377317606506,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,1.47202963994889,1.64647379806855,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0.964887042726734,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0,0.318909537314974,0.655453258862952,0.863424909329478,0.578596234326046,0,0.54390568381871,0,0.551873492609465,4.97706828962155,4.57125577709592,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,0.430846795465598,0,0,0.849229592366497,0,0.292255857911312,0.395287777946524,0.642642632843614,0.567760340833074,0,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0.388076051348264,0.857348140126369,1.41872186913819,0,1.31639216481697,0.304464949114599,0,0.63549621259146,0.220528398054962,0.49465875882444,0.161464426695906,0,0.238744688006273,0.164140899745061,0.874442509889552,1.8542530201051,0,0,0.555583582109135,0.188368457004691,0.546776910884101,0.228778173206523,2.03974115992626,0.139951452323658,0.690999869022119,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,0.621339313086926,5.07323644815771,0.598066184175915,0.165458490457098,0.777804753376191,0,1.01373675294467,0.352071715937262,0.2604087696879,0.943734099831398,2.65742532908607,2.59227005632079,0.948033361884535,0,0.205421914329655,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.295379054349154,0.100966449948148,0.762068066549998,0.403304740547362,0.487289403698762,0.865906574762965,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,6.21227026878773,4.60325236507177,2.29158205375759,5.499301834998,0,2.2661816921691,3.37511250115903,2.2516060161211,2.71885445390523,4.65984280576638,0.93408612825759,1.19707462020309,1.53660245178721,0.729320151204882,1.04806581313991,0.919217542250071,1.11123363900808,0.824140228955577,0.962757628775446,0.505394423527595,0.50695859978048,0.943131706930381,0.936415074698824,1.02440243847791,0.976402972245426,1.42888107384922,0.579421629724277,0.77163688185482,0.412085900803307,0,3.42869252385415,0.887379030796687,0.715308569841963,0.436039249896986,0.846984423737976,1.01537529470012,1.46342378298218,0.526139422875686,1.49384525230448,0.561142271657738,0.355905054372522,0.492522411877817,1.63692417267876,0.619747364743864,1.73615949883027,1.24905288968973,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p5@Pgm2l1 | |||
}} | }} |
Latest revision as of 14:36, 25 September 2015
Short description: | p5@Pgm2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pgm2l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 17bp_to_NM_027629, uc009imr.2, uc012fpz.1, uc012fqa.1_5end |
EntrezGene: | Pgm2l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.51e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-20 | 23 |
neuron | 3.25e-12 | 33 |
neuronal stem cell | 3.25e-12 | 33 |
neuroblast | 3.25e-12 | 33 |
electrically signaling cell | 3.25e-12 | 33 |
electrically responsive cell | 2.08e-09 | 39 |
electrically active cell | 2.08e-09 | 39 |
neural cell | 5.37e-08 | 43 |
ectodermal cell | 1.09e-07 | 44 |
neurectodermal cell | 1.09e-07 | 44 |