FFCP PHASE1:Mm9::chr8:63433589..63433600,-: Difference between revisions
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{{FFCP|EntrezGene=12725|HGNC=|MCL_coexpression_id=1|UniProt=Q8K4W8|association_with_transcript=0bp_to_NM_173876,uc009ltk.2,uc009lto.2_5end|description=CAGE_peak_3_at_Clcn3_5end|id=chr8:63433589..63433600,-|ontology_enrichment_celltype=CL:0000117!9.70e-10!23;CL:0000337!9.70e-10!23;CL:0000540!1.03e-07!33;CL:0000047!1.03e-07!33;CL:0000031!1.03e-07!33;CL:0000404!1.03e-07!33;CL:0000393!9.36e-07!39;CL:0000211!9.36e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,8.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.05e-24!71;UBERON:0003075!3.05e-24!71;UBERON:0007284!3.05e-24!71;UBERON:0000033!1.37e-21!63;UBERON:0001049!5.84e-20!52;UBERON:0005068!5.84e-20!52;UBERON:0006241!5.84e-20!52;UBERON:0007135!5.84e-20!52;UBERON:0004121!1.91e-19!102;UBERON:0000924!1.91e-19!102;UBERON:0006601!1.91e-19!102;UBERON:0000955!2.84e-19!50;UBERON:0006238!2.84e-19!50;UBERON:0000073!9.15e-19!75;UBERON:0001016!9.15e-19!75;UBERON:0001017!1.09e-18!73;UBERON:0005743!1.09e-18!73;UBERON:0002616!1.61e-18!49;UBERON:0002020!1.35e-17!34;UBERON:0003056!3.05e-17!49;UBERON:0002791!6.92e-15!29;UBERON:0003528!6.92e-15!29;UBERON:0001893!6.92e-15!29;UBERON:0003080!4.35e-14!40;UBERON:0000025!1.22e-13!114;UBERON:0002780!1.94e-13!39;UBERON:0001890!1.94e-13!39;UBERON:0006240!1.94e-13!39;UBERON:0004111!1.33e-12!122;UBERON:0000956!2.76e-10!21;UBERON:0001869!2.76e-10!21;UBERON:0000203!2.76e-10!21;UBERON:0007811!6.96e-10!86;UBERON:0002619!2.94e-08!17;UBERON:0000153!1.09e-07!94;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10;UBERON:0000477!4.82e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.83e-29,54;UBERON:0002346,6.88e-27,64;UBERON:0003075,6.88e-27,64;UBERON:0007284,6.88e-27,64;UBERON:0001049,3.59e-26,52;UBERON:0005068,3.59e-26,52;UBERON:0006241,3.59e-26,52;UBERON:0007135,3.59e-26,52;UBERON:0000955,2.32e-23,47;UBERON:0006238,2.32e-23,47;UBERON:0001017,5.39e-23,73;UBERON:0010371,1.47e-22,73;UBERON:0001016,3.68e-22,75;UBERON:0002616,8.26e-22,46;UBERON:0004121,4.24e-21,95;UBERON:0000924,4.24e-21,95;UBERON:0006601,4.24e-21,95;UBERON:0002020,1.23e-20,34;UBERON:0003056,1.61e-19,49;UBERON:0003528,5.02e-18,29;UBERON:0002791,5.02e-18,29;UBERON:0001893,5.02e-18,29;UBERON:0003080,3.11e-17,40;UBERON:0010314,3.30e-16,92;UBERON:0002780,6.67e-16,39;UBERON:0001890,6.67e-16,39;UBERON:0006240,6.67e-16,39;UBERON:0002021,1.66e-14,10;UBERON:0000411,1.66e-14,10;UBERON:0001950,1.66e-14,10;UBERON:0002619,4.90e-12,17;UBERON:0000956,2.39e-11,21;UBERON:0001869,2.39e-11,21;UBERON:0000203,2.39e-11,21;UBERON:0003076,9.28e-10,12;UBERON:0003057,9.28e-10,12;UBERON:0000025,1.49e-09,114;UBERON:0004111,1.93e-08,122;UBERON:0002950,3.24e-08,4;UBERON:0001891,3.24e-08,4;UBERON:0009616,3.24e-08,4;UBERON:0010286,3.24e-08,4;UBERON:0002420,3.50e-08,8;UBERON:0007245,3.50e-08,8;UBERON:0010009,3.50e-08,8;UBERON:0010011,3.50e-08,8;UBERON:0000454,3.50e-08,8;UBERON:0004684,8.16e-07,3;UBERON:0002275,8.16e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.945041568321835,0.841299845405528,0.571301968807607,0.883474163806454,0.857435594504678,0.287536413054709,0,2.20231761998777,2.68143409978894,2.15049146558741,0.791317726381163,0.731901148819277,1.56274011167028,1.67509799400829,1.68828783009504,2.44477196442896,1.47314292736834,2.70506193518296,1.3047961207771,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,2.24685959107234,3.20250421973039,1.00523481690292,3.47648640384553,4.85859368927628,3.1168206683934,3.24482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,1.08858398642125,1.40925092313335,1.49922759295566,3.88055056108524,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.828503090142008,0,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.243206428637567,0.584799949701329,0.439100230582101,0.402619256281115,2.73376933133365,2.26390147234426,0.330418782983798,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.982794975566015,0.449724224769707,1.21716072833102,1.20588579876208,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.238043640886014,0.585400943573396,0.630540576424764,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.40825884981688,2.10981035865966,0.163934945376675,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,2.89189184779626,0.283880170416537,0,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,2.78137953015765,1.70870880797853,0,0.185194527369712,0.753473828018764,0.683471138605126,2.0590035588587,0,0,0,0,0,0.203319467126849,0,0,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,4.5032120322422,4.07828168085784,1.03552062350364,0.207574695168353,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.468207537349412,0.128050304809739,0.229741875822453,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0.872078499793971,0.188218760830661,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.591026894253381,0,0.309873682371932,0.771626443924566,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0.882365676478062,0|short_description=p3@Clcn3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12725 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K4W8 | |||
|association_with_transcript=0bp_to_NM_173876,uc009ltk.2,uc009lto.2_5end | |||
|cluster_id=chr8:63433589..63433600,- | |||
|description=CAGE_peak_3_at_Clcn3_5end | |||
|id=chr8:63433589..63433600,- | |||
|ontology_enrichment_celltype=CL:0000117!9.70e-10!23;CL:0000337!9.70e-10!23;CL:0000540!1.03e-07!33;CL:0000047!1.03e-07!33;CL:0000031!1.03e-07!33;CL:0000404!1.03e-07!33;CL:0000393!9.36e-07!39;CL:0000211!9.36e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.05e-24!71;UBERON:0003075!3.05e-24!71;UBERON:0007284!3.05e-24!71;UBERON:0000033!1.37e-21!63;UBERON:0001049!5.84e-20!52;UBERON:0005068!5.84e-20!52;UBERON:0006241!5.84e-20!52;UBERON:0007135!5.84e-20!52;UBERON:0004121!1.91e-19!102;UBERON:0000924!1.91e-19!102;UBERON:0006601!1.91e-19!102;UBERON:0000955!2.84e-19!50;UBERON:0006238!2.84e-19!50;UBERON:0000073!9.15e-19!75;UBERON:0001016!9.15e-19!75;UBERON:0001017!1.09e-18!73;UBERON:0005743!1.09e-18!73;UBERON:0002616!1.61e-18!49;UBERON:0002020!1.35e-17!34;UBERON:0003056!3.05e-17!49;UBERON:0002791!6.92e-15!29;UBERON:0003528!6.92e-15!29;UBERON:0001893!6.92e-15!29;UBERON:0003080!4.35e-14!40;UBERON:0000025!1.22e-13!114;UBERON:0002780!1.94e-13!39;UBERON:0001890!1.94e-13!39;UBERON:0006240!1.94e-13!39;UBERON:0004111!1.33e-12!122;UBERON:0000956!2.76e-10!21;UBERON:0001869!2.76e-10!21;UBERON:0000203!2.76e-10!21;UBERON:0007811!6.96e-10!86;UBERON:0002619!2.94e-08!17;UBERON:0000153!1.09e-07!94;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10;UBERON:0000477!4.82e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.83e-29,54;UBERON:0002346,6.88e-27,64;UBERON:0003075,6.88e-27,64;UBERON:0007284,6.88e-27,64;UBERON:0001049,3.59e-26,52;UBERON:0005068,3.59e-26,52;UBERON:0006241,3.59e-26,52;UBERON:0007135,3.59e-26,52;UBERON:0000955,2.32e-23,47;UBERON:0006238,2.32e-23,47;UBERON:0001017,5.39e-23,73;UBERON:0010371,1.47e-22,73;UBERON:0001016,3.68e-22,75;UBERON:0002616,8.26e-22,46;UBERON:0004121,4.24e-21,95;UBERON:0000924,4.24e-21,95;UBERON:0006601,4.24e-21,95;UBERON:0002020,1.23e-20,34;UBERON:0003056,1.61e-19,49;UBERON:0003528,5.02e-18,29;UBERON:0002791,5.02e-18,29;UBERON:0001893,5.02e-18,29;UBERON:0003080,3.11e-17,40;UBERON:0010314,3.30e-16,92;UBERON:0002780,6.67e-16,39;UBERON:0001890,6.67e-16,39;UBERON:0006240,6.67e-16,39;UBERON:0002021,1.66e-14,10;UBERON:0000411,1.66e-14,10;UBERON:0001950,1.66e-14,10;UBERON:0002619,4.90e-12,17;UBERON:0000956,2.39e-11,21;UBERON:0001869,2.39e-11,21;UBERON:0000203,2.39e-11,21;UBERON:0003076,9.28e-10,12;UBERON:0003057,9.28e-10,12;UBERON:0000025,1.49e-09,114;UBERON:0004111,1.93e-08,122;UBERON:0002950,3.24e-08,4;UBERON:0001891,3.24e-08,4;UBERON:0009616,3.24e-08,4;UBERON:0010286,3.24e-08,4;UBERON:0002420,3.50e-08,8;UBERON:0007245,3.50e-08,8;UBERON:0010009,3.50e-08,8;UBERON:0010011,3.50e-08,8;UBERON:0000454,3.50e-08,8;UBERON:0004684,8.16e-07,3;UBERON:0002275,8.16e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.945041568321835,0.841299845405528,0.571301968807607,0.883474163806454,0.857435594504678,0.287536413054709,0,2.20231761998777,2.68143409978894,2.15049146558741,0.791317726381163,0.731901148819277,1.56274011167028,1.67509799400829,1.68828783009504,2.44477196442896,1.47314292736834,2.70506193518296,1.3047961207771,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,2.24685959107234,3.20250421973039,1.00523481690292,3.47648640384553,4.85859368927628,3.1168206683934,3.24482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,1.08858398642125,1.40925092313335,1.49922759295566,3.88055056108524,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.828503090142008,0,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.243206428637567,0.584799949701329,0.439100230582101,0.402619256281115,2.73376933133365,2.26390147234426,0.330418782983798,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.982794975566015,0.449724224769707,1.21716072833102,1.20588579876208,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.238043640886014,0.585400943573396,0.630540576424764,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.40825884981688,2.10981035865966,0.163934945376675,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,2.89189184779626,0.283880170416537,0,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,2.78137953015765,1.70870880797853,0,0.185194527369712,0.753473828018764,0.683471138605126,2.0590035588587,0,0,0,0,0,0.203319467126849,0,0,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,4.5032120322422,4.07828168085784,1.03552062350364,0.207574695168353,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.468207537349412,0.128050304809739,0.229741875822453,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0.872078499793971,0.188218760830661,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.591026894253381,0,0.309873682371932,0.771626443924566,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0.882365676478062,0 | |||
|short_description=p3@Clcn3 | |||
}} |
Latest revision as of 15:49, 25 September 2015
Short description: | p3@Clcn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Clcn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_173876, uc009ltk.2, uc009lto.2_5end |
EntrezGene: | Clcn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.16e-07 | 3 |