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FFCP PHASE1:Mm9::chr19:38339325..38339338,+: Difference between revisions

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{{FFCP|EntrezGene=56839|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=22bp_to_uc008hjj.1,uc008hjk.1_5end|description=CAGE_peak_7_at_Lgi1_5end|id=chr19:38339325..38339338,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.71e-24!71;UBERON:0003075!8.71e-24!71;UBERON:0007284!8.71e-24!71;UBERON:0000033!6.12e-20!63;UBERON:0004121!1.41e-17!102;UBERON:0000924!1.41e-17!102;UBERON:0006601!1.41e-17!102;UBERON:0001049!2.08e-17!52;UBERON:0005068!2.08e-17!52;UBERON:0006241!2.08e-17!52;UBERON:0007135!2.08e-17!52;UBERON:0000955!3.45e-15!50;UBERON:0006238!3.45e-15!50;UBERON:0003056!4.26e-15!49;UBERON:0002616!1.88e-14!49;UBERON:0002020!3.27e-14!34;UBERON:0000073!1.22e-12!75;UBERON:0001016!1.22e-12!75;UBERON:0001017!1.48e-12!73;UBERON:0005743!1.48e-12!73;UBERON:0000153!2.57e-12!94;UBERON:0007811!5.31e-12!86;UBERON:0003080!1.31e-11!40;UBERON:0002791!3.91e-11!29;UBERON:0003528!3.91e-11!29;UBERON:0001893!3.91e-11!29;UBERON:0002780!7.81e-11!39;UBERON:0001890!7.81e-11!39;UBERON:0006240!7.81e-11!39;UBERON:0002021!2.99e-10!10;UBERON:0000411!2.99e-10!10;UBERON:0001950!2.99e-10!10;UBERON:0002619!6.48e-08!17;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0003076!6.60e-07!12;UBERON:0003057!6.60e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002616,5.48e-26,46;UBERON:0001049,1.97e-25,52;UBERON:0005068,1.97e-25,52;UBERON:0006241,1.97e-25,52;UBERON:0007135,1.97e-25,52;UBERON:0000955,2.26e-25,47;UBERON:0006238,2.26e-25,47;UBERON:0000073,2.31e-24,54;UBERON:0002346,4.35e-20,64;UBERON:0003075,4.35e-20,64;UBERON:0007284,4.35e-20,64;UBERON:0002021,1.66e-19,10;UBERON:0000411,1.66e-19,10;UBERON:0001950,1.66e-19,10;UBERON:0001017,2.61e-19,73;UBERON:0001016,1.04e-18,75;UBERON:0003080,5.95e-18,40;UBERON:0010371,3.15e-17,73;UBERON:0002780,9.39e-16,39;UBERON:0001890,9.39e-16,39;UBERON:0006240,9.39e-16,39;UBERON:0003528,1.47e-15,29;UBERON:0002791,1.47e-15,29;UBERON:0001893,1.47e-15,29;UBERON:0000956,7.73e-15,21;UBERON:0001869,7.73e-15,21;UBERON:0000203,7.73e-15,21;UBERON:0002619,1.09e-14,17;UBERON:0010314,1.32e-14,92;UBERON:0003056,3.34e-14,49;UBERON:0004121,4.30e-14,95;UBERON:0000924,4.30e-14,95;UBERON:0006601,4.30e-14,95;UBERON:0002020,5.34e-13,34;UBERON:0004733,9.67e-11,6;UBERON:0004732,9.67e-11,6;UBERON:0002028,9.67e-11,6;UBERON:0007277,9.67e-11,6;UBERON:0000025,7.04e-10,114;UBERON:0004111,5.14e-09,122;UBERON:0001896,8.97e-09,2;UBERON:0002298,8.97e-09,2;UBERON:0005290,8.97e-09,2;UBERON:0010096,8.97e-09,2;UBERON:0003076,4.35e-08,12;UBERON:0003057,4.35e-08,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,0,1.65993539510744,0.921639199537461,0.263772575460388,0.182975287204819,0,0.837548997004143,0.56276261003168,1.22238598221448,0.294628585473668,0.711858403995515,0.372798891650601,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,1.21786191324856,0.461230994512117,0.150722640552623,0.470354828542819,0.125666591329675,0,0.433798070759735,0,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,2.39665023047716,3.20250421973039,0.376963056338593,2.43354048269187,3.3243009452943,2.0778804455956,2.10913641988085,0.101839363850316,0,0,0.631325567659422,0.520481771850815,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,5.67782861123144,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0.35613120733451,0.651547837414304,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,1.8542530201051,0,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,3.22227665555024,2.86447756719698,1.54667864109319,2.05524755931193,2.2661816921691,0.675022500231806,1.35096360967266,0.906284817968409,3.10656187051092,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.384150914429216,0.229741875822453,0,0,0.578727661391115,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.57386499620653,0,0.231867835620421|short_description=p7@Lgi1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56839
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|association_with_transcript=22bp_to_uc008hjj.1,uc008hjk.1_5end
|cluster_id=chr19:38339325..38339338,+
|description=CAGE_peak_7_at_Lgi1_5end
|id=chr19:38339325..38339338,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!8.71e-24!71;UBERON:0003075!8.71e-24!71;UBERON:0007284!8.71e-24!71;UBERON:0000033!6.12e-20!63;UBERON:0004121!1.41e-17!102;UBERON:0000924!1.41e-17!102;UBERON:0006601!1.41e-17!102;UBERON:0001049!2.08e-17!52;UBERON:0005068!2.08e-17!52;UBERON:0006241!2.08e-17!52;UBERON:0007135!2.08e-17!52;UBERON:0000955!3.45e-15!50;UBERON:0006238!3.45e-15!50;UBERON:0003056!4.26e-15!49;UBERON:0002616!1.88e-14!49;UBERON:0002020!3.27e-14!34;UBERON:0000073!1.22e-12!75;UBERON:0001016!1.22e-12!75;UBERON:0001017!1.48e-12!73;UBERON:0005743!1.48e-12!73;UBERON:0000153!2.57e-12!94;UBERON:0007811!5.31e-12!86;UBERON:0003080!1.31e-11!40;UBERON:0002791!3.91e-11!29;UBERON:0003528!3.91e-11!29;UBERON:0001893!3.91e-11!29;UBERON:0002780!7.81e-11!39;UBERON:0001890!7.81e-11!39;UBERON:0006240!7.81e-11!39;UBERON:0002021!2.99e-10!10;UBERON:0000411!2.99e-10!10;UBERON:0001950!2.99e-10!10;UBERON:0002619!6.48e-08!17;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0003076!6.60e-07!12;UBERON:0003057!6.60e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002616,5.48e-26,46;UBERON:0001049,1.97e-25,52;UBERON:0005068,1.97e-25,52;UBERON:0006241,1.97e-25,52;UBERON:0007135,1.97e-25,52;UBERON:0000955,2.26e-25,47;UBERON:0006238,2.26e-25,47;UBERON:0000073,2.31e-24,54;UBERON:0002346,4.35e-20,64;UBERON:0003075,4.35e-20,64;UBERON:0007284,4.35e-20,64;UBERON:0002021,1.66e-19,10;UBERON:0000411,1.66e-19,10;UBERON:0001950,1.66e-19,10;UBERON:0001017,2.61e-19,73;UBERON:0001016,1.04e-18,75;UBERON:0003080,5.95e-18,40;UBERON:0010371,3.15e-17,73;UBERON:0002780,9.39e-16,39;UBERON:0001890,9.39e-16,39;UBERON:0006240,9.39e-16,39;UBERON:0003528,1.47e-15,29;UBERON:0002791,1.47e-15,29;UBERON:0001893,1.47e-15,29;UBERON:0000956,7.73e-15,21;UBERON:0001869,7.73e-15,21;UBERON:0000203,7.73e-15,21;UBERON:0002619,1.09e-14,17;UBERON:0010314,1.32e-14,92;UBERON:0003056,3.34e-14,49;UBERON:0004121,4.30e-14,95;UBERON:0000924,4.30e-14,95;UBERON:0006601,4.30e-14,95;UBERON:0002020,5.34e-13,34;UBERON:0004733,9.67e-11,6;UBERON:0004732,9.67e-11,6;UBERON:0002028,9.67e-11,6;UBERON:0007277,9.67e-11,6;UBERON:0000025,7.04e-10,114;UBERON:0004111,5.14e-09,122;UBERON:0001896,8.97e-09,2;UBERON:0002298,8.97e-09,2;UBERON:0005290,8.97e-09,2;UBERON:0010096,8.97e-09,2;UBERON:0003076,4.35e-08,12;UBERON:0003057,4.35e-08,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,0,1.65993539510744,0.921639199537461,0.263772575460388,0.182975287204819,0,0.837548997004143,0.56276261003168,1.22238598221448,0.294628585473668,0.711858403995515,0.372798891650601,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,1.21786191324856,0.461230994512117,0.150722640552623,0.470354828542819,0.125666591329675,0,0.433798070759735,0,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,2.39665023047716,3.20250421973039,0.376963056338593,2.43354048269187,3.3243009452943,2.0778804455956,2.10913641988085,0.101839363850316,0,0,0.631325567659422,0.520481771850815,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,5.67782861123144,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0.35613120733451,0.651547837414304,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,1.8542530201051,0,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,3.22227665555024,2.86447756719698,1.54667864109319,2.05524755931193,2.2661816921691,0.675022500231806,1.35096360967266,0.906284817968409,3.10656187051092,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.384150914429216,0.229741875822453,0,0,0.578727661391115,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.57386499620653,0,0.231867835620421
|short_description=p7@Lgi1
}}

Latest revision as of 16:57, 25 September 2015

Short description:p7@Lgi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Lgi1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 22bp_to_uc008hjj.1, uc008hjk.1_5end
EntrezGene:Lgi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Lgi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of brain5.48e-2646
neural tube1.97e-2552
neural rod1.97e-2552
future spinal cord1.97e-2552
neural keel1.97e-2552
brain2.26e-2547
future brain2.26e-2547
regional part of nervous system2.31e-2454
neurectoderm4.35e-2064
neural plate4.35e-2064
presumptive neural plate4.35e-2064
occipital lobe1.66e-1910
visual cortex1.66e-1910
neocortex1.66e-1910
central nervous system2.61e-1973
nervous system1.04e-1875
anterior neural tube5.95e-1840
ecto-epithelium3.15e-1773
regional part of forebrain9.39e-1639
forebrain9.39e-1639
future forebrain9.39e-1639
brain grey matter1.47e-1529
regional part of telencephalon1.47e-1529
telencephalon1.47e-1529
cerebral cortex7.73e-1521
cerebral hemisphere7.73e-1521
pallium7.73e-1521
regional part of cerebral cortex1.09e-1417
structure with developmental contribution from neural crest1.32e-1492
pre-chordal neural plate3.34e-1449
ectoderm-derived structure4.30e-1495
ectoderm4.30e-1495
presumptive ectoderm4.30e-1495
gray matter5.34e-1334
segmental subdivision of hindbrain9.67e-116
segmental subdivision of nervous system9.67e-116
hindbrain9.67e-116
presumptive hindbrain9.67e-116
tube7.04e-10114
anatomical conduit5.14e-09122
medulla oblongata8.97e-092
brainstem8.97e-092
myelencephalon8.97e-092
future myelencephalon8.97e-092
posterior neural tube4.35e-0812
chordal neural plate4.35e-0812
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