FFCP PHASE1:Mm9::chr16:81200953..81200962,+: Difference between revisions
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{{FFCP|EntrezGene=17968|HGNC=|MCL_coexpression_id=1|UniProt=O35136,Q71VC5|association_with_transcript=11bp_to_ENSMUST00000037785,ENSMUST00000067602,NM_001113208,NM_010954,uc007zta.2,uc007ztb.2_5end|description=CAGE_peak_4_at_Ncam2_5end|id=chr16:81200953..81200962,+|ontology_enrichment_celltype=CL:0000117!1.53e-11!23;CL:0000337!1.53e-11!23;CL:0000540!3.54e-10!33;CL:0000047!3.54e-10!33;CL:0000031!3.54e-10!33;CL:0000404!3.54e-10!33;CL:0000393!3.11e-07!39;CL:0000211!3.11e-07!39;CL:0000221!4.98e-07!44;CL:0000133!4.98e-07!44;CL:0002319!9.24e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,7.49e-12,23;CL:0000337,7.49e-12,23;CL:0000540,6.80e-09,33;CL:0000047,6.80e-09,33;CL:0000031,6.80e-09,33;CL:0000404,6.80e-09,33;CL:0002612,7.75e-08,3;CL:0002610,3.84e-07,3;CL:0000393,4.19e-07,39;CL:0000211,4.19e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.21e-24!73;UBERON:0005743!1.21e-24!73;UBERON:0000073!3.47e-24!75;UBERON:0001016!3.47e-24!75;UBERON:0001049!9.57e-23!52;UBERON:0005068!9.57e-23!52;UBERON:0006241!9.57e-23!52;UBERON:0007135!9.57e-23!52;UBERON:0002346!1.56e-22!71;UBERON:0003075!1.56e-22!71;UBERON:0007284!1.56e-22!71;UBERON:0004121!2.00e-21!102;UBERON:0000924!2.00e-21!102;UBERON:0006601!2.00e-21!102;UBERON:0000955!6.94e-21!50;UBERON:0006238!6.94e-21!50;UBERON:0000033!3.18e-20!63;UBERON:0002616!3.90e-20!49;UBERON:0002020!8.76e-18!34;UBERON:0003080!5.47e-17!40;UBERON:0003056!1.11e-16!49;UBERON:0002780!3.14e-16!39;UBERON:0001890!3.14e-16!39;UBERON:0006240!3.14e-16!39;UBERON:0002791!8.51e-14!29;UBERON:0003528!8.51e-14!29;UBERON:0001893!8.51e-14!29;UBERON:0007811!2.13e-10!86;UBERON:0000153!2.23e-10!94;UBERON:0002021!3.04e-10!10;UBERON:0000411!3.04e-10!10;UBERON:0001950!3.04e-10!10;UBERON:0000956!2.77e-09!21;UBERON:0001869!2.77e-09!21;UBERON:0000203!2.77e-09!21;UBERON:0002619!4.17e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.88e-41,54;UBERON:0001049,3.21e-37,52;UBERON:0005068,3.21e-37,52;UBERON:0006241,3.21e-37,52;UBERON:0007135,3.21e-37,52;UBERON:0001017,9.51e-37,73;UBERON:0001016,1.45e-35,75;UBERON:0002020,8.10e-30,34;UBERON:0002346,6.46e-29,64;UBERON:0003075,6.46e-29,64;UBERON:0007284,6.46e-29,64;UBERON:0000955,5.32e-28,47;UBERON:0006238,5.32e-28,47;UBERON:0004121,1.80e-26,95;UBERON:0000924,1.80e-26,95;UBERON:0006601,1.80e-26,95;UBERON:0002616,2.19e-26,46;UBERON:0003080,4.94e-26,40;UBERON:0010371,1.77e-24,73;UBERON:0002780,2.49e-24,39;UBERON:0001890,2.49e-24,39;UBERON:0006240,2.49e-24,39;UBERON:0002021,3.25e-24,10;UBERON:0000411,3.25e-24,10;UBERON:0001950,3.25e-24,10;UBERON:0003528,1.33e-20,29;UBERON:0002791,1.33e-20,29;UBERON:0001893,1.33e-20,29;UBERON:0003056,3.25e-20,49;UBERON:0002619,6.22e-19,17;UBERON:0010314,5.90e-18,92;UBERON:0000956,1.70e-17,21;UBERON:0001869,1.70e-17,21;UBERON:0000203,1.70e-17,21;UBERON:0002240,8.61e-14,6;UBERON:0005174,8.61e-14,6;UBERON:0001137,8.61e-14,6;UBERON:0000025,4.04e-13,114;UBERON:0001948,7.12e-12,5;UBERON:0002315,7.12e-12,5;UBERON:0004111,8.54e-12,122;UBERON:0003076,2.73e-11,12;UBERON:0003057,2.73e-11,12;UBERON:0011216,5.81e-09,194;UBERON:0002257,7.75e-08,3;UBERON:0004684,3.84e-07,3;UBERON:0002275,3.84e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.99955689082663,3.75476519617743,0.244981598429908,0,0.919218786610021,1.10115880999389,1.91531007127782,3.22573719838111,1.18697658957174,0.548925861614458,0.52091337055676,0.279182999001381,4.50210088025344,2.44477196442896,4.41942878210502,2.98980529678116,2.05039390407831,0,0.151143120213571,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.54644086988199,0.457500602818626,1.25654352112864,3.65031072403781,5.37002460393694,1.87009240103604,2.92034273521964,0,0,0,0.420883711772948,0,0,0.360124259610698,0.150704817835715,0,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.23485534855141,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.05046120976805,1.75817529888305,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,1.97643888973262,1.92792789853084,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,1.06404140185364,0.356737635204141,1.15184314421485,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.76195141904306,4.58316410751517,4.29632955859219,6.16574267793578,6.7985450765073,4.05013500139084,3.60256962579376,4.53142408984205,4.14208249401456,0.103787347584177,0,1.02440163452481,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.576226371643824,0.631790158511746,0,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.376437521661322,0.592302255241736,0.73171189149109,1.05227884575137,0.135804113845862,0.561142271657738,0.830445126869219,0.886540341380071,0,0.619747364743864,0.578719832943424,0.749431733813838,0.935726433781634,0.644613162144895,0,0.882365676478062,0.463735671240843|short_description=p4@Ncam2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17968 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=O35136,Q71VC5 | |||
|association_with_transcript=11bp_to_ENSMUST00000037785,ENSMUST00000067602,NM_001113208,NM_010954,uc007zta.2,uc007ztb.2_5end | |||
|cluster_id=chr16:81200953..81200962,+ | |||
|description=CAGE_peak_4_at_Ncam2_5end | |||
|id=chr16:81200953..81200962,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.53e-11!23;CL:0000337!1.53e-11!23;CL:0000540!3.54e-10!33;CL:0000047!3.54e-10!33;CL:0000031!3.54e-10!33;CL:0000404!3.54e-10!33;CL:0000393!3.11e-07!39;CL:0000211!3.11e-07!39;CL:0000221!4.98e-07!44;CL:0000133!4.98e-07!44;CL:0002319!9.24e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.49e-12,23;CL:0000337,7.49e-12,23;CL:0000540,6.80e-09,33;CL:0000047,6.80e-09,33;CL:0000031,6.80e-09,33;CL:0000404,6.80e-09,33;CL:0002612,7.75e-08,3;CL:0002610,3.84e-07,3;CL:0000393,4.19e-07,39;CL:0000211,4.19e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.21e-24!73;UBERON:0005743!1.21e-24!73;UBERON:0000073!3.47e-24!75;UBERON:0001016!3.47e-24!75;UBERON:0001049!9.57e-23!52;UBERON:0005068!9.57e-23!52;UBERON:0006241!9.57e-23!52;UBERON:0007135!9.57e-23!52;UBERON:0002346!1.56e-22!71;UBERON:0003075!1.56e-22!71;UBERON:0007284!1.56e-22!71;UBERON:0004121!2.00e-21!102;UBERON:0000924!2.00e-21!102;UBERON:0006601!2.00e-21!102;UBERON:0000955!6.94e-21!50;UBERON:0006238!6.94e-21!50;UBERON:0000033!3.18e-20!63;UBERON:0002616!3.90e-20!49;UBERON:0002020!8.76e-18!34;UBERON:0003080!5.47e-17!40;UBERON:0003056!1.11e-16!49;UBERON:0002780!3.14e-16!39;UBERON:0001890!3.14e-16!39;UBERON:0006240!3.14e-16!39;UBERON:0002791!8.51e-14!29;UBERON:0003528!8.51e-14!29;UBERON:0001893!8.51e-14!29;UBERON:0007811!2.13e-10!86;UBERON:0000153!2.23e-10!94;UBERON:0002021!3.04e-10!10;UBERON:0000411!3.04e-10!10;UBERON:0001950!3.04e-10!10;UBERON:0000956!2.77e-09!21;UBERON:0001869!2.77e-09!21;UBERON:0000203!2.77e-09!21;UBERON:0002619!4.17e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.88e-41,54;UBERON:0001049,3.21e-37,52;UBERON:0005068,3.21e-37,52;UBERON:0006241,3.21e-37,52;UBERON:0007135,3.21e-37,52;UBERON:0001017,9.51e-37,73;UBERON:0001016,1.45e-35,75;UBERON:0002020,8.10e-30,34;UBERON:0002346,6.46e-29,64;UBERON:0003075,6.46e-29,64;UBERON:0007284,6.46e-29,64;UBERON:0000955,5.32e-28,47;UBERON:0006238,5.32e-28,47;UBERON:0004121,1.80e-26,95;UBERON:0000924,1.80e-26,95;UBERON:0006601,1.80e-26,95;UBERON:0002616,2.19e-26,46;UBERON:0003080,4.94e-26,40;UBERON:0010371,1.77e-24,73;UBERON:0002780,2.49e-24,39;UBERON:0001890,2.49e-24,39;UBERON:0006240,2.49e-24,39;UBERON:0002021,3.25e-24,10;UBERON:0000411,3.25e-24,10;UBERON:0001950,3.25e-24,10;UBERON:0003528,1.33e-20,29;UBERON:0002791,1.33e-20,29;UBERON:0001893,1.33e-20,29;UBERON:0003056,3.25e-20,49;UBERON:0002619,6.22e-19,17;UBERON:0010314,5.90e-18,92;UBERON:0000956,1.70e-17,21;UBERON:0001869,1.70e-17,21;UBERON:0000203,1.70e-17,21;UBERON:0002240,8.61e-14,6;UBERON:0005174,8.61e-14,6;UBERON:0001137,8.61e-14,6;UBERON:0000025,4.04e-13,114;UBERON:0001948,7.12e-12,5;UBERON:0002315,7.12e-12,5;UBERON:0004111,8.54e-12,122;UBERON:0003076,2.73e-11,12;UBERON:0003057,2.73e-11,12;UBERON:0011216,5.81e-09,194;UBERON:0002257,7.75e-08,3;UBERON:0004684,3.84e-07,3;UBERON:0002275,3.84e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.99955689082663,3.75476519617743,0.244981598429908,0,0.919218786610021,1.10115880999389,1.91531007127782,3.22573719838111,1.18697658957174,0.548925861614458,0.52091337055676,0.279182999001381,4.50210088025344,2.44477196442896,4.41942878210502,2.98980529678116,2.05039390407831,0,0.151143120213571,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.54644086988199,0.457500602818626,1.25654352112864,3.65031072403781,5.37002460393694,1.87009240103604,2.92034273521964,0,0,0,0.420883711772948,0,0,0.360124259610698,0.150704817835715,0,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.23485534855141,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.05046120976805,1.75817529888305,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,1.97643888973262,1.92792789853084,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,1.06404140185364,0.356737635204141,1.15184314421485,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.76195141904306,4.58316410751517,4.29632955859219,6.16574267793578,6.7985450765073,4.05013500139084,3.60256962579376,4.53142408984205,4.14208249401456,0.103787347584177,0,1.02440163452481,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.576226371643824,0.631790158511746,0,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.376437521661322,0.592302255241736,0.73171189149109,1.05227884575137,0.135804113845862,0.561142271657738,0.830445126869219,0.886540341380071,0,0.619747364743864,0.578719832943424,0.749431733813838,0.935726433781634,0.644613162144895,0,0.882365676478062,0.463735671240843 | |||
|short_description=p4@Ncam2 | |||
}} |
Latest revision as of 18:44, 25 September 2015
Short description: | p4@Ncam2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ncam2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 11bp_to_ENSMUST00000037785, ENSMUST00000067602, NM_001113208, NM_010954, uc007zta.2, uc007ztb.2_5end |
EntrezGene: | Ncam2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.49e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.49e-12 | 23 |
neuron | 6.80e-09 | 33 |
neuronal stem cell | 6.80e-09 | 33 |
neuroblast | 6.80e-09 | 33 |
electrically signaling cell | 6.80e-09 | 33 |
neuron of the ventral spinal cord | 7.75e-08 | 3 |
raphe nuclei neuron | 3.84e-07 | 3 |
electrically responsive cell | 4.19e-07 | 39 |
electrically active cell | 4.19e-07 | 39 |