FFCP PHASE1:Mm9::chr2:146911200..146911219,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr2:146911200..146911219,- to FFCP PHASE1:Mm9::chr2:146911200..146911219,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228731 | |EntrezGene=228731 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1319 | |||
|TSSclassifier=NA | |||
|UniProt=Q9EQM3 | |UniProt=Q9EQM3 | ||
|association_with_transcript=-19bp_to_ENSMUST00000067020_5end | |||
|cluster_id=chr2:146911200..146911219,- | |||
|description=CAGE_peak_1_at_Nkx2-4_5end | |||
|id=chr2:146911200..146911219,- | |||
|ontology_enrichment_celltype=CL:0002613!5.81e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.65e-20,3;CL:0002614,4.66e-09,3;CL:0000117,6.38e-07,23;CL:0000337,6.38e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.03e-17!8;UBERON:0003296!1.03e-17!8;UBERON:0010133!1.03e-17!8;UBERON:0001894!4.78e-17!10;UBERON:0006222!4.78e-17!10;UBERON:0003080!2.75e-09!40;UBERON:0002780!2.84e-08!39;UBERON:0001890!2.84e-08!39;UBERON:0006240!2.84e-08!39;UBERON:0007811!3.10e-08!86;UBERON:0003056!5.10e-08!49;UBERON:0002420!3.62e-07!8;UBERON:0007245!3.62e-07!8;UBERON:0010009!3.62e-07!8;UBERON:0010011!3.62e-07!8;UBERON:0000454!3.62e-07!8;UBERON:0000153!4.75e-07!94;UBERON:0002616!6.62e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.44e-49,8;UBERON:0003296,1.44e-49,8;UBERON:0010133,1.44e-49,8;UBERON:0001894,1.49e-39,10;UBERON:0006222,1.49e-39,10;UBERON:0002780,3.59e-26,39;UBERON:0001890,3.59e-26,39;UBERON:0006240,3.59e-26,39;UBERON:0003080,1.74e-25,40;UBERON:0002616,5.32e-22,46;UBERON:0000955,1.66e-21,47;UBERON:0006238,1.66e-21,47;UBERON:0003056,1.42e-20,49;UBERON:0002420,5.28e-20,8;UBERON:0007245,5.28e-20,8;UBERON:0010009,5.28e-20,8;UBERON:0010011,5.28e-20,8;UBERON:0000454,5.28e-20,8;UBERON:0001049,2.58e-19,52;UBERON:0005068,2.58e-19,52;UBERON:0006241,2.58e-19,52;UBERON:0007135,2.58e-19,52;UBERON:0000073,1.50e-18,54;UBERON:0001017,1.24e-15,73;UBERON:0002346,1.91e-15,64;UBERON:0003075,1.91e-15,64;UBERON:0007284,1.91e-15,64;UBERON:0001016,3.51e-15,75;UBERON:0010371,2.27e-13,73;UBERON:0000369,1.50e-12,5;UBERON:0002435,1.50e-12,5;UBERON:0000204,1.50e-12,5;UBERON:0010082,1.50e-12,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010314,2.59e-10,92;UBERON:0002038,4.66e-09,3;UBERON:0009663,4.66e-09,3;UBERON:0009661,4.66e-09,3;UBERON:0000125,4.66e-09,3;UBERON:0002308,4.66e-09,3;UBERON:0000025,4.96e-08,114;UBERON:0004111,2.11e-07,122;UBERON:0002950,5.23e-07,4;UBERON:0001891,5.23e-07,4;UBERON:0009616,5.23e-07,4;UBERON:0010286,5.23e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,14.9031505135119,10.2466160834699,11.9810075228055,0,2.25105044012672,1.68078072554491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0,0.162241263067758,0,0,0,0,0.650602214813519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,8.28281032544027,14.746889951234,9.00215547132688,3.19212420556092,5.17269571046005,2.63278432963394,5.48036908406279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,14.9031505135119,10.2466160834699,11.9810075228055,0,2.25105044012672,1.68078072554491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0,0.162241263067758,0,0,0,0,0.650602214813519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,8.28281032544027,14.746889951234,9.00215547132688,3.19212420556092,5.17269571046005,2.63278432963394,5.48036908406279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p1@Nkx2-4 | |||
}} | }} |
Latest revision as of 20:50, 25 September 2015
Short description: | p1@Nkx2-4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nkx2-4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1319 |
Association with transcript: | -19bp_to_ENSMUST00000067020_5end |
EntrezGene: | Nkx2-4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.65e-20 | 3 |
neuron of the substantia nigra | 4.66e-09 | 3 |
CNS neuron (sensu Vertebrata) | 6.38e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.38e-07 | 23 |