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FFCP PHASE1:Mm9::chr19:47253528..47253569,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:47253528..47253569,+
|DHSsupport=NA
|short_description=p3@Neurl1a
|DPIdataset=NA
|description=CAGE_peak_3_at_Neurl1a_5end
|association_with_transcript=218bp_to_ENSMUST00000111808,NM_021360,uc008hut.1,uc008huu.1_5end
|EntrezGene=18011
|EntrezGene=18011
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q923S6,Q499W5
|UniProt=Q923S6,Q499W5
|association_with_transcript=218bp_to_ENSMUST00000111808,NM_021360,uc008hut.1,uc008huu.1_5end
|cluster_id=chr19:47253528..47253569,+
|description=CAGE_peak_3_at_Neurl1a_5end
|id=chr19:47253528..47253569,+
|ontology_enrichment_celltype=CL:0000540!3.27e-12!33;CL:0000047!3.27e-12!33;CL:0000031!3.27e-12!33;CL:0000404!3.27e-12!33;CL:0000393!3.79e-10!39;CL:0000211!3.79e-10!39;CL:0000221!9.22e-09!44;CL:0000133!9.22e-09!44;CL:0002319!2.10e-08!43;CL:0000117!1.64e-07!23;CL:0000337!1.64e-07!23;CL:0000055!8.81e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-15,33;CL:0000047,1.02e-15,33;CL:0000031,1.02e-15,33;CL:0000404,1.02e-15,33;CL:0000393,5.33e-12,39;CL:0000211,5.33e-12,39;CL:0000221,1.13e-10,44;CL:0000133,1.13e-10,44;CL:0002319,3.91e-10,43;CL:0000107,1.35e-08,9;CL:0000117,1.66e-08,23;CL:0000337,1.66e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.50e-27!73;UBERON:0005743!4.50e-27!73;UBERON:0004121!1.47e-26!102;UBERON:0000924!1.47e-26!102;UBERON:0006601!1.47e-26!102;UBERON:0000073!3.34e-26!75;UBERON:0001016!3.34e-26!75;UBERON:0002346!2.70e-24!71;UBERON:0003075!2.70e-24!71;UBERON:0007284!2.70e-24!71;UBERON:0001049!2.92e-19!52;UBERON:0005068!2.92e-19!52;UBERON:0006241!2.92e-19!52;UBERON:0007135!2.92e-19!52;UBERON:0000033!4.86e-19!63;UBERON:0000955!7.22e-18!50;UBERON:0006238!7.22e-18!50;UBERON:0002616!2.64e-17!49;UBERON:0003056!5.97e-16!49;UBERON:0003080!4.55e-15!40;UBERON:0002780!1.72e-14!39;UBERON:0001890!1.72e-14!39;UBERON:0006240!1.72e-14!39;UBERON:0002020!1.21e-12!34;UBERON:0002791!6.47e-10!29;UBERON:0003528!6.47e-10!29;UBERON:0001893!6.47e-10!29;UBERON:0002021!6.53e-08!10;UBERON:0000411!6.53e-08!10;UBERON:0001950!6.53e-08!10;UBERON:0007811!6.26e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.26e-39,73;UBERON:0001016,1.57e-37,75;UBERON:0004121,2.99e-34,95;UBERON:0000924,2.99e-34,95;UBERON:0006601,2.99e-34,95;UBERON:0002346,1.47e-33,64;UBERON:0003075,1.47e-33,64;UBERON:0007284,1.47e-33,64;UBERON:0000073,9.32e-31,54;UBERON:0010371,7.01e-30,73;UBERON:0001049,4.48e-29,52;UBERON:0005068,4.48e-29,52;UBERON:0006241,4.48e-29,52;UBERON:0007135,4.48e-29,52;UBERON:0010314,4.02e-25,92;UBERON:0000955,2.17e-24,47;UBERON:0006238,2.17e-24,47;UBERON:0002616,1.67e-23,46;UBERON:0003056,9.21e-23,49;UBERON:0003080,3.97e-21,40;UBERON:0002780,3.25e-20,39;UBERON:0001890,3.25e-20,39;UBERON:0006240,3.25e-20,39;UBERON:0002020,1.78e-17,34;UBERON:0003528,3.51e-13,29;UBERON:0002791,3.51e-13,29;UBERON:0001893,3.51e-13,29;UBERON:0002021,6.55e-12,10;UBERON:0000411,6.55e-12,10;UBERON:0001950,6.55e-12,10;UBERON:0002410,1.35e-08,9;UBERON:0003076,2.37e-08,12;UBERON:0003057,2.37e-08,12;UBERON:0001894,2.98e-08,10;UBERON:0006222,2.98e-08,10;UBERON:0002619,3.31e-08,17;UBERON:0002420,5.40e-08,8;UBERON:0007245,5.40e-08,8;UBERON:0010009,5.40e-08,8;UBERON:0010011,5.40e-08,8;UBERON:0000454,5.40e-08,8;UBERON:0011216,1.48e-07,194;UBERON:0000956,2.77e-07,21;UBERON:0001869,2.77e-07,21;UBERON:0000203,2.77e-07,21;UBERON:0004111,7.49e-07,122
|phase1_expression=1.28119077683835,0,0,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,0.528990979272033,3.1691570175309,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0,8.56952953211411,4.63823935998388,0.244981598429908,0.287536413054709,0.919218786610021,2.20231761998777,4.21368215681119,4.76180253094355,4.48413378282659,3.01909223887952,1.56274011167028,6.70039197603314,6.19038871034848,9.62628960993904,5.89257170947335,4.41352210477219,6.15118171223492,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.867426633830679,1.52232739156071,0.691846491768175,1.20578112442098,2.82212897125692,1.0053327306374,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,33.3770108593164,33.0925796765259,0.255457055208591,0,0,0,5.69204429738326,5.94750783664214,1.88481528169297,11.6462294528825,9.46147192122223,5.61027720310812,5.19172041816825,0.712875546952214,0.373220911830279,0.758168275301024,4.20883711772948,0,0,0.720248519221397,1.05493372485001,1.02054748726992,1.2811372028485,1.78033276663485,9.8307280880826,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0,0,0,0,9.2527577368216,1.13195073617213,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.193952487167626,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0.704070744865506,0.167506257441816,0.952174563544055,0.780534591431195,0.157635144106191,0.44292937929755,0.637819074629948,0,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,5.45872005958493,3.39913891117389,0.327869890753351,0.504941854408746,2.2085575359138,3.12350995437311,7.53981892064796,2.62865677747807,2.22798674082394,3.96307143104365,4.85772842009873,7.59865230569411,6.32460444714438,5.14114106274891,0.283880170416537,0.534196811001766,0.81443479676788,1.31976098378028,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,14.6389030474129,0.18006109403131,1.4229455216103,2.35770738534752,5.67488747655275,8.38333442729732,5.26556865926787,14.9187825066154,0.469343416127421,0.21183207086382,0.441056796109924,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0,4.07935664423121,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,1.62655573701479,1.18805874903981,0.418176592028937,1.31017538247707,1.07891477107857,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,0.299033092087958,0.165458490457098,0.777804753376191,0.645799117388655,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,4.44336066274038,0,0,0.214368379079066,0,9.60078132449013,4.60325236507177,6.30185064783336,7.73339320546594,13.7016503954128,10.5755145634558,11.4753825039407,8.10578165803597,7.25027854374727,12.4262474820437,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,1.83843508450014,0.666740183404846,1.03017528619447,1.60459604795908,0.252697211763798,1.2673964994512,0.754505365544305,1.12369808963859,0.320125762024346,0.976402972245426,0,1.27472758539341,0.38581844092741,0.824171801606613,0.883193520806384,1.02860775715625,1.59728225543404,0.476872379894642,1.16277133305863,0.752875043322645,1.35383372626682,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.711810108745045,0.29551344712669,1.22769312950907,0.309873682371932,0.771626443924566,1.24905288968973,0.467863216890817,0,0.57386499620653,0,0.927471342481686
|phase1_expression=1.28119077683835,0,0,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,0.528990979272033,3.1691570175309,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0,8.56952953211411,4.63823935998388,0.244981598429908,0.287536413054709,0.919218786610021,2.20231761998777,4.21368215681119,4.76180253094355,4.48413378282659,3.01909223887952,1.56274011167028,6.70039197603314,6.19038871034848,9.62628960993904,5.89257170947335,4.41352210477219,6.15118171223492,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.867426633830679,1.52232739156071,0.691846491768175,1.20578112442098,2.82212897125692,1.0053327306374,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,33.3770108593164,33.0925796765259,0.255457055208591,0,0,0,5.69204429738326,5.94750783664214,1.88481528169297,11.6462294528825,9.46147192122223,5.61027720310812,5.19172041816825,0.712875546952214,0.373220911830279,0.758168275301024,4.20883711772948,0,0,0.720248519221397,1.05493372485001,1.02054748726992,1.2811372028485,1.78033276663485,9.8307280880826,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0,0,0,0,9.2527577368216,1.13195073617213,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.193952487167626,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0.704070744865506,0.167506257441816,0.952174563544055,0.780534591431195,0.157635144106191,0.44292937929755,0.637819074629948,0,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,5.45872005958493,3.39913891117389,0.327869890753351,0.504941854408746,2.2085575359138,3.12350995437311,7.53981892064796,2.62865677747807,2.22798674082394,3.96307143104365,4.85772842009873,7.59865230569411,6.32460444714438,5.14114106274891,0.283880170416537,0.534196811001766,0.81443479676788,1.31976098378028,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,14.6389030474129,0.18006109403131,1.4229455216103,2.35770738534752,5.67488747655275,8.38333442729732,5.26556865926787,14.9187825066154,0.469343416127421,0.21183207086382,0.441056796109924,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0,4.07935664423121,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,1.62655573701479,1.18805874903981,0.418176592028937,1.31017538247707,1.07891477107857,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,0.299033092087958,0.165458490457098,0.777804753376191,0.645799117388655,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,4.44336066274038,0,0,0.214368379079066,0,9.60078132449013,4.60325236507177,6.30185064783336,7.73339320546594,13.7016503954128,10.5755145634558,11.4753825039407,8.10578165803597,7.25027854374727,12.4262474820437,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,1.83843508450014,0.666740183404846,1.03017528619447,1.60459604795908,0.252697211763798,1.2673964994512,0.754505365544305,1.12369808963859,0.320125762024346,0.976402972245426,0,1.27472758539341,0.38581844092741,0.824171801606613,0.883193520806384,1.02860775715625,1.59728225543404,0.476872379894642,1.16277133305863,0.752875043322645,1.35383372626682,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.711810108745045,0.29551344712669,1.22769312950907,0.309873682371932,0.771626443924566,1.24905288968973,0.467863216890817,0,0.57386499620653,0,0.927471342481686
|short_description=p3@Neurl1a
}}
}}

Latest revision as of 21:50, 25 September 2015

Short description:p3@Neurl1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Neurl1a_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 218bp_to_ENSMUST00000111808, NM_021360, uc008hut.1, uc008huu.1_5end
EntrezGene:Neurl1a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Neurl1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B233.38
cerebellum, neonate N30.CNhs11135.1395-42I233.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.26e-3973
nervous system1.57e-3775
ectoderm-derived structure2.99e-3495
ectoderm2.99e-3495
presumptive ectoderm2.99e-3495
neurectoderm1.47e-3364
neural plate1.47e-3364
presumptive neural plate1.47e-3364
regional part of nervous system9.32e-3154
ecto-epithelium7.01e-3073
neural tube4.48e-2952
neural rod4.48e-2952
future spinal cord4.48e-2952
neural keel4.48e-2952
structure with developmental contribution from neural crest4.02e-2592
brain2.17e-2447
future brain2.17e-2447
regional part of brain1.67e-2346
pre-chordal neural plate9.21e-2349
anterior neural tube3.97e-2140
regional part of forebrain3.25e-2039
forebrain3.25e-2039
future forebrain3.25e-2039
gray matter1.78e-1734
brain grey matter3.51e-1329
regional part of telencephalon3.51e-1329
telencephalon3.51e-1329
occipital lobe6.55e-1210
visual cortex6.55e-1210
neocortex6.55e-1210
autonomic nervous system1.35e-089
posterior neural tube2.37e-0812
chordal neural plate2.37e-0812
diencephalon2.98e-0810
future diencephalon2.98e-0810
regional part of cerebral cortex3.31e-0817
basal ganglion5.40e-088
nuclear complex of neuraxis5.40e-088
aggregate regional part of brain5.40e-088
collection of basal ganglia5.40e-088
cerebral subcortex5.40e-088
organ system subdivision1.48e-07194
cerebral cortex2.77e-0721
cerebral hemisphere2.77e-0721
pallium2.77e-0721
anatomical conduit7.49e-07122
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