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FFCP PHASE1:Mm9::chr9:107302127..107302180,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:107302127..107302180,+
|DHSsupport=NA
|short_description=p1@Cacna2d2
|DPIdataset=NA
|description=CAGE_peak_1_at_Cacna2d2_5end
|association_with_transcript=-30bp_to_ENSMUST00000085092,ENSMUST00000164988,ENSMUST00000168539,NM_001174047,NM_001174048,NM_001174049,NM_001174050,NM_020263,uc009rli.2,uc009rlj.2,uc012hae.1,uc012haf.1_5end
|EntrezGene=56808
|EntrezGene=56808
|HGNC=
|HGNC=
|MCL_coexpression_id=401
|TSSclassifier=NA
|UniProt=Q6PHS9,E9Q683,E9Q5D2
|UniProt=Q6PHS9,E9Q683,E9Q5D2
|association_with_transcript=-30bp_to_ENSMUST00000085092,ENSMUST00000164988,ENSMUST00000168539,NM_001174047,NM_001174048,NM_001174049,NM_001174050,NM_020263,uc009rli.2,uc009rlj.2,uc012hae.1,uc012haf.1_5end
|cluster_id=chr9:107302127..107302180,+
|description=CAGE_peak_1_at_Cacna2d2_5end
|id=chr9:107302127..107302180,+
|ontology_enrichment_celltype=CL:0000117!4.37e-14!23;CL:0000337!4.37e-14!23;CL:0000540!6.92e-09!33;CL:0000047!6.92e-09!33;CL:0000031!6.92e-09!33;CL:0000404!6.92e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.56e-16,23;CL:0000337,2.56e-16,23;CL:0000540,2.17e-10,33;CL:0000047,2.17e-10,33;CL:0000031,2.17e-10,33;CL:0000404,2.17e-10,33;CL:0000393,9.00e-08,39;CL:0000211,9.00e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.52e-25!63;UBERON:0002346!2.34e-24!71;UBERON:0003075!2.34e-24!71;UBERON:0007284!2.34e-24!71;UBERON:0001049!1.07e-23!52;UBERON:0005068!1.07e-23!52;UBERON:0006241!1.07e-23!52;UBERON:0007135!1.07e-23!52;UBERON:0000955!5.66e-22!50;UBERON:0006238!5.66e-22!50;UBERON:0002616!2.18e-21!49;UBERON:0004121!3.68e-21!102;UBERON:0000924!3.68e-21!102;UBERON:0006601!3.68e-21!102;UBERON:0001017!1.09e-20!73;UBERON:0005743!1.09e-20!73;UBERON:0003056!1.43e-20!49;UBERON:0000073!1.77e-20!75;UBERON:0001016!1.77e-20!75;UBERON:0003080!1.78e-17!40;UBERON:0002020!5.44e-17!34;UBERON:0002780!9.45e-17!39;UBERON:0001890!9.45e-17!39;UBERON:0006240!9.45e-17!39;UBERON:0002791!2.55e-13!29;UBERON:0003528!2.55e-13!29;UBERON:0001893!2.55e-13!29;UBERON:0007811!1.32e-11!86;UBERON:0000153!3.60e-11!94;UBERON:0000025!1.15e-08!114;UBERON:0000956!2.75e-08!21;UBERON:0001869!2.75e-08!21;UBERON:0000203!2.75e-08!21;UBERON:0004111!3.53e-08!122;UBERON:0002619!1.04e-07!17;UBERON:0000468!5.98e-07!333;UBERON:0003076!7.50e-07!12;UBERON:0003057!7.50e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.65e-28,54;UBERON:0002346,1.17e-25,64;UBERON:0003075,1.17e-25,64;UBERON:0007284,1.17e-25,64;UBERON:0001049,1.86e-25,52;UBERON:0005068,1.86e-25,52;UBERON:0006241,1.86e-25,52;UBERON:0007135,1.86e-25,52;UBERON:0001017,9.02e-25,73;UBERON:0001016,1.15e-23,75;UBERON:0010314,7.66e-23,92;UBERON:0010371,9.52e-22,73;UBERON:0004121,3.15e-21,95;UBERON:0000924,3.15e-21,95;UBERON:0006601,3.15e-21,95;UBERON:0000955,5.33e-20,47;UBERON:0006238,5.33e-20,47;UBERON:0002616,3.38e-19,46;UBERON:0003056,8.80e-19,49;UBERON:0002020,1.96e-18,34;UBERON:0003080,1.13e-16,40;UBERON:0002780,1.07e-15,39;UBERON:0001890,1.07e-15,39;UBERON:0006240,1.07e-15,39;UBERON:0003528,2.83e-13,29;UBERON:0002791,2.83e-13,29;UBERON:0001893,2.83e-13,29;UBERON:0000025,9.45e-10,114;UBERON:0003076,1.16e-09,12;UBERON:0003057,1.16e-09,12;UBERON:0002420,1.76e-09,8;UBERON:0007245,1.76e-09,8;UBERON:0010009,1.76e-09,8;UBERON:0010011,1.76e-09,8;UBERON:0000454,1.76e-09,8;UBERON:0004111,8.38e-09,122;UBERON:0002240,4.51e-08,6;UBERON:0005174,4.51e-08,6;UBERON:0001137,4.51e-08,6;UBERON:0002619,1.31e-07,17;UBERON:0001948,3.63e-07,5;UBERON:0002315,3.63e-07,5;UBERON:0002021,4.69e-07,10;UBERON:0000411,4.69e-07,10;UBERON:0001950,4.69e-07,10
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0,0,8.6996078169627,11.1088105647127,17.747279298173,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,13.4255962669788,9.718215801871,1.83736198822431,0.958454710182364,5.51531271966013,11.0115880999389,9.19348834213351,13.0565553267807,11.0784481693363,9.05727671663856,8.85552729946492,10.3297709630511,8.4414391504752,10.3902808488231,14.7314292736834,12.6710795911202,12.1159639786445,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,0,0,0.484875253135222,1.86391761218122,12.296793474485,14.8707161837553,0,0,0,0,11.9832511523858,9.15001205637253,7.53926112677186,2.43354048269187,2.55715457330331,12.0517065844545,10.3834408363365,0.203678727700633,0.124406970610093,0,1.47309299120532,0.780722657776222,0.229902104433473,0.900310649026746,1.9591626318643,3.33378845841506,2.562274405697,2.34254311399322,1.55222022443409,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,4.14251545071004,4.22146907965973,3.24111710629827,4.26140524053378,1.37734962223183,1.23413690309903,1.62773761325285,1.07309360559848,1.05088808130453,0.987359099480883,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,0.805238512562231,2.73376933133365,2.57261530948211,0,0,0.213288250535234,0,0,0,0.667134131534611,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,8.83028244932856,7.97039468826982,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,2.89189184779626,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,0.857348140126369,1.41872186913819,1.07021290561242,1.31639216481697,1.2178597964584,0,0,0.441056796109924,0.49465875882444,0.484393280087717,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,7.6024373824309,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.674321731924103,0.330613822901344,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0,0.258319646955462,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0.187682475451182,0.36630324853453,0,0,3.95326289831947,3.22227665555024,2.29158205375759,2.40594455281163,1.37016503954128,5.2877572817279,0.675022500231806,4.05289082901798,2.26571204492102,2.5888015587591,0.518936737920883,2.79317411380722,1.36586884603307,1.45864030240976,0.419226325255965,1.10306105070008,1.77797382241292,1.85431551515005,1.28367683836726,1.01078884705519,1.52087579934144,0.943131706930381,0.749132059759059,1.60062881012173,1.49332219284595,0.476293691283074,1.62238056322798,1.15745532278223,0,1.61918812147837,1.71434626192708,0.177475806159338,2.38436189947321,1.16277133305863,0.564656282491984,1.26921911837515,1.28049581010941,1.31534855718921,1.35804113845862,1.12228454331548,1.66089025373844,1.0835493061312,1.22769312950907,0.77468420592983,1.92906610981141,2.99772693525535,0.935726433781634,2.36358159453128,1.3390183244819,0.882365676478062,0.463735671240843
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0,0,8.6996078169627,11.1088105647127,17.747279298173,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,13.4255962669788,9.718215801871,1.83736198822431,0.958454710182364,5.51531271966013,11.0115880999389,9.19348834213351,13.0565553267807,11.0784481693363,9.05727671663856,8.85552729946492,10.3297709630511,8.4414391504752,10.3902808488231,14.7314292736834,12.6710795911202,12.1159639786445,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,0,0,0.484875253135222,1.86391761218122,12.296793474485,14.8707161837553,0,0,0,0,11.9832511523858,9.15001205637253,7.53926112677186,2.43354048269187,2.55715457330331,12.0517065844545,10.3834408363365,0.203678727700633,0.124406970610093,0,1.47309299120532,0.780722657776222,0.229902104433473,0.900310649026746,1.9591626318643,3.33378845841506,2.562274405697,2.34254311399322,1.55222022443409,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,4.14251545071004,4.22146907965973,3.24111710629827,4.26140524053378,1.37734962223183,1.23413690309903,1.62773761325285,1.07309360559848,1.05088808130453,0.987359099480883,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,0.805238512562231,2.73376933133365,2.57261530948211,0,0,0.213288250535234,0,0,0,0.667134131534611,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,8.83028244932856,7.97039468826982,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,2.89189184779626,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,0.857348140126369,1.41872186913819,1.07021290561242,1.31639216481697,1.2178597964584,0,0,0.441056796109924,0.49465875882444,0.484393280087717,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,7.6024373824309,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.674321731924103,0.330613822901344,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0,0.258319646955462,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0.187682475451182,0.36630324853453,0,0,3.95326289831947,3.22227665555024,2.29158205375759,2.40594455281163,1.37016503954128,5.2877572817279,0.675022500231806,4.05289082901798,2.26571204492102,2.5888015587591,0.518936737920883,2.79317411380722,1.36586884603307,1.45864030240976,0.419226325255965,1.10306105070008,1.77797382241292,1.85431551515005,1.28367683836726,1.01078884705519,1.52087579934144,0.943131706930381,0.749132059759059,1.60062881012173,1.49332219284595,0.476293691283074,1.62238056322798,1.15745532278223,0,1.61918812147837,1.71434626192708,0.177475806159338,2.38436189947321,1.16277133305863,0.564656282491984,1.26921911837515,1.28049581010941,1.31534855718921,1.35804113845862,1.12228454331548,1.66089025373844,1.0835493061312,1.22769312950907,0.77468420592983,1.92906610981141,2.99772693525535,0.935726433781634,2.36358159453128,1.3390183244819,0.882365676478062,0.463735671240843
|short_description=p1@Cacna2d2
}}
}}

Latest revision as of 03:20, 26 September 2015

Short description:p1@Cacna2d2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cacna2d2_5end
Coexpression cluster:MCL_coexpression_mm9:401
Association with transcript: -30bp_to_ENSMUST00000085092, ENSMUST00000164988, ENSMUST00000168539, NM_001174047, NM_001174048, NM_001174049, NM_001174050, NM_020263, uc009rli.2, uc009rlj.2, uc012hae.1, uc012haf.1_5end
EntrezGene:Cacna2d2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cacna2d2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I214.87
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.56e-1623
neuroblast (sensu Vertebrata)2.56e-1623
neuron2.17e-1033
neuronal stem cell2.17e-1033
neuroblast2.17e-1033
electrically signaling cell2.17e-1033
electrically responsive cell9.00e-0839
electrically active cell9.00e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.65e-2854
neurectoderm1.17e-2564
neural plate1.17e-2564
presumptive neural plate1.17e-2564
neural tube1.86e-2552
neural rod1.86e-2552
future spinal cord1.86e-2552
neural keel1.86e-2552
central nervous system9.02e-2573
nervous system1.15e-2375
structure with developmental contribution from neural crest7.66e-2392
ecto-epithelium9.52e-2273
ectoderm-derived structure3.15e-2195
ectoderm3.15e-2195
presumptive ectoderm3.15e-2195
brain5.33e-2047
future brain5.33e-2047
regional part of brain3.38e-1946
pre-chordal neural plate8.80e-1949
gray matter1.96e-1834
anterior neural tube1.13e-1640
regional part of forebrain1.07e-1539
forebrain1.07e-1539
future forebrain1.07e-1539
brain grey matter2.83e-1329
regional part of telencephalon2.83e-1329
telencephalon2.83e-1329
tube9.45e-10114
posterior neural tube1.16e-0912
chordal neural plate1.16e-0912
basal ganglion1.76e-098
nuclear complex of neuraxis1.76e-098
aggregate regional part of brain1.76e-098
collection of basal ganglia1.76e-098
cerebral subcortex1.76e-098
anatomical conduit8.38e-09122
spinal cord4.51e-086
dorsal region element4.51e-086
dorsum4.51e-086
regional part of cerebral cortex1.31e-0717
regional part of spinal cord3.63e-075
gray matter of spinal cord3.63e-075
occipital lobe4.69e-0710
visual cortex4.69e-0710
neocortex4.69e-0710
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