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FFCP PHASE1:Mm9::chr17:34766293..34766351,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=260297
|EntrezGene=260297
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O35449
|UniProt=O35449
|association_with_transcript=-126bp_to_ENSMUST00000015620_5end
|association_with_transcript=-126bp_to_ENSMUST00000015620_5end
|cluster_id=chr17:34766293..34766351,+
|description=CAGE_peak_2_at_Prrt1_5end
|description=CAGE_peak_2_at_Prrt1_5end
|id=chr17:34766293..34766351,+
|id=chr17:34766293..34766351,+
|ontology_enrichment_celltype=CL:0002319!8.42e-15!43;CL:0000221!2.73e-14!44;CL:0000133!2.73e-14!44;CL:0000055!5.15e-13!50;CL:0000540!6.37e-13!33;CL:0000047!6.37e-13!33;CL:0000031!6.37e-13!33;CL:0000404!6.37e-13!33;CL:0000117!3.97e-12!23;CL:0000337!3.97e-12!23;CL:0000393!9.83e-12!39;CL:0000211!9.83e-12!39
|ontology_enrichment_celltype=CL:0002319!8.42e-15!43;CL:0000221!2.73e-14!44;CL:0000133!2.73e-14!44;CL:0000055!5.15e-13!50;CL:0000540!6.37e-13!33;CL:0000047!6.37e-13!33;CL:0000031!6.37e-13!33;CL:0000404!6.37e-13!33;CL:0000117!3.97e-12!23;CL:0000337!3.97e-12!23;CL:0000393!9.83e-12!39;CL:0000211!9.83e-12!39
|ontology_enrichment_celltype_v019_2=CL:0002319,6.18e-19,43;CL:0000221,3.54e-18,44;CL:0000133,3.54e-18,44;CL:0000540,5.44e-16,33;CL:0000047,5.44e-16,33;CL:0000031,5.44e-16,33;CL:0000404,5.44e-16,33;CL:0000117,6.69e-15,23;CL:0000337,6.69e-15,23;CL:0000393,1.23e-14,39;CL:0000211,1.23e-14,39;CL:0002321,2.66e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0001017!1.05e-36!73;UBERON:0005743!1.05e-36!73;UBERON:0000073!7.68e-35!75;UBERON:0001016!7.68e-35!75;UBERON:0004121!4.25e-31!102;UBERON:0000924!4.25e-31!102;UBERON:0006601!4.25e-31!102;UBERON:0001049!1.07e-28!52;UBERON:0005068!1.07e-28!52;UBERON:0006241!1.07e-28!52;UBERON:0007135!1.07e-28!52;UBERON:0002346!1.19e-28!71;UBERON:0003075!1.19e-28!71;UBERON:0007284!1.19e-28!71;UBERON:0000955!3.76e-28!50;UBERON:0006238!3.76e-28!50;UBERON:0002616!2.19e-27!49;UBERON:0000033!3.80e-25!63;UBERON:0003080!6.30e-22!40;UBERON:0007811!1.00e-21!86;UBERON:0003056!2.03e-21!49;UBERON:0002780!2.77e-21!39;UBERON:0001890!2.77e-21!39;UBERON:0006240!2.77e-21!39;UBERON:0000153!3.76e-20!94;UBERON:0002020!5.03e-20!34;UBERON:0002791!1.45e-17!29;UBERON:0003528!1.45e-17!29;UBERON:0001893!1.45e-17!29;UBERON:0000956!5.47e-13!21;UBERON:0001869!5.47e-13!21;UBERON:0000203!5.47e-13!21;UBERON:0002619!3.52e-11!17;UBERON:0002021!2.87e-08!10;UBERON:0000411!2.87e-08!10;UBERON:0001950!2.87e-08!10;UBERON:0000025!2.72e-07!114;UBERON:0003076!3.35e-07!12;UBERON:0003057!3.35e-07!12;UBERON:0004111!6.10e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.02e-47,73;UBERON:0001016,5.08e-45,75;UBERON:0000073,3.40e-38,54;UBERON:0001049,3.00e-36,52;UBERON:0005068,3.00e-36,52;UBERON:0006241,3.00e-36,52;UBERON:0007135,3.00e-36,52;UBERON:0004121,2.19e-34,95;UBERON:0000924,2.19e-34,95;UBERON:0006601,2.19e-34,95;UBERON:0002346,3.73e-34,64;UBERON:0003075,3.73e-34,64;UBERON:0007284,3.73e-34,64;UBERON:0000955,1.01e-32,47;UBERON:0006238,1.01e-32,47;UBERON:0002616,1.03e-31,46;UBERON:0003080,4.09e-27,40;UBERON:0010371,4.27e-27,73;UBERON:0002780,2.99e-26,39;UBERON:0001890,2.99e-26,39;UBERON:0006240,2.99e-26,39;UBERON:0002020,1.62e-25,34;UBERON:0003056,4.90e-24,49;UBERON:0003528,3.57e-22,29;UBERON:0002791,3.57e-22,29;UBERON:0001893,3.57e-22,29;UBERON:0010314,2.07e-18,92;UBERON:0000956,5.52e-16,21;UBERON:0001869,5.52e-16,21;UBERON:0000203,5.52e-16,21;UBERON:0002619,1.61e-13,17;UBERON:0002021,1.18e-10,10;UBERON:0000411,1.18e-10,10;UBERON:0001950,1.18e-10,10;UBERON:0003076,3.26e-09,12;UBERON:0003057,3.26e-09,12;UBERON:0000025,1.35e-08,114;UBERON:0011216,7.87e-08,194;UBERON:0002420,2.52e-07,8;UBERON:0007245,2.52e-07,8;UBERON:0010009,2.52e-07,8;UBERON:0010011,2.52e-07,8;UBERON:0000454,2.52e-07,8;UBERON:0004111,6.01e-07,122
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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78294373027274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.62203089951223,1.46837401729345,3.12956537739216,2.39827672018491,8.5677611266444,3.4997381833371,1.95980990275508,2.87505128729943,0,0,0,0,0.573066879877513,0,5.66486090406874,5.81890077199236,9.50747105259269,3.04960078862219,0,0,0,0,3.59520132622086,9.60545763303886,3.83651565541367,3.10513658162888,2.52389953621658,4.28476476605705,5.52171352379034,4.04219637409348,4.2172007248024,0.919218786610021,11.0115880999389,15.3224805702225,13.6709814598057,6.19865552331911,7.41049913179518,10.4182674111352,6.70039197603314,12.9435400307286,17.5717984943332,5.59794312399969,7.26095572075425,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0.517875767294343,1.33597925158342,0.173485326766136,0.913396434936424,0.461230994512117,0.904335843315735,1.41106448562846,0.628332956648377,0.247194967734374,0.433798070759735,0,0,0,0,0,17.8596286177044,23.458031163107,0.255457055208591,0,0,0,12.8819949888148,12.8100168789215,9.67538511269056,29.7239587528793,28.8958466783273,13.2984348518118,20.4423991465375,0.712875546952214,0.870848794270651,1.51633655060205,1.05220927943237,0.260240885925407,0.459804208866946,1.0803727788321,0.753524089178575,1.08858398642125,0.640568601424249,1.21812241927647,2.32833033665114,0,0,0.351902248327898,0.43839146485515,0.278047249225598,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0.617068451549513,0.465067889500816,0.536546802799238,0.467061369468678,0.16455984991348,0.656669856316381,0.324275238183423,0.292399974850665,0.219550115291051,0.805238512562231,46.263788684108,14.097931895962,0,0.264450566663544,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0,0.380451252225118,0.949058123089023,0.494096864172033,0,1.1937388322469,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0,0,0.449724224769707,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0.491764273019036,0.275936746304732,9.15138362930414,8.08760637486202,0,0,1.26203287766503,1.56175497718655,2.36965737506079,1.43381278771531,1.11399337041197,1.41538265394416,1.21443210502468,1.75353514746787,1.97643888973262,26.66966926301,0.99358059645788,0.712262414669021,0.488660878060728,1.15479086080775,0,0.242780636154981,0.302323556964751,0,0.295301892880773,1.22974059177571,0,0,0,0.316036757935816,0,0,11.9153862013826,0.900305470156551,2.19909762430683,2.14337035031592,2.6601035046341,2.49716344642899,2.30368628842969,2.43571959291679,0.23467170806371,0,0.661585194164886,0.49465875882444,0,0.241251699712623,0.238744688006273,0.492422699235184,0.291480836629851,10.198391610578,0.170870880797853,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0.86404272657441,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0,0.518459893167171,0,0.56369293868419,0,0,0.388902376688095,0,0.337912250981556,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,1.58005560314089,0.202725215290164,0.513554785824136,0.77952493786677,2.32734704367726,3.77494574084403,1.68273629327956,2.65841148914239,3.23092639834072,2.51482461961499,2.92395936896837,2.72882066071307,4.04089734889384,3.62318396762864,0.453460767230423,0,0,0,0.965947970160952,0.750729901804728,0.36630324853453,0.428736758158132,0.501572104035363,32.1908550291728,29.0004898999521,29.7905666988486,16.6697586873377,16.4419804744954,20.3956352295219,32.4010800111267,33.3237690385923,34.4388230827996,28.4768171463501,0.415149390336707,0.798049746802062,2.39027048055788,1.21553358534147,1.67690530102386,1.65459157605013,0.666740183404846,1.64828045791115,1.28367683836726,0.505394423527595,2.5347929989024,2.07488975524684,1.49826411951812,1.47257850531199,2.12511235135769,3.33405583898152,2.20180219295225,1.92909220463705,2.47251540481984,1.61918812147837,0.342869252385415,1.24233064311536,1.66905332963125,1.16277133305863,1.50575008664529,1.09998990259179,1.28049581010941,1.8414879800649,0.814824683075171,2.24456908663095,1.06771516311757,1.77308068276014,1.22769312950907,1.39443157067369,1.35034627686799,3.2475375131933,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p2@Prrt1
|short_description=p2@Prrt1
}}
}}

Latest revision as of 08:34, 26 September 2015

Short description:p2@Prrt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prrt1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -126bp_to_ENSMUST00000015620_5end
EntrezGene:Prrt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prrt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I223.46
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D529.72
cortex, neonate N30.CNhs11107.1392-42F228.90
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B220.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E846.26
hippocampus, neonate N00.CNhs11228.627-43G114.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A38.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I926.67
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.48
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell6.18e-1943
ectodermal cell3.54e-1844
neurectodermal cell3.54e-1844
neuron5.44e-1633
neuronal stem cell5.44e-1633
neuroblast5.44e-1633
electrically signaling cell5.44e-1633
CNS neuron (sensu Vertebrata)6.69e-1523
neuroblast (sensu Vertebrata)6.69e-1523
electrically responsive cell1.23e-1439
electrically active cell1.23e-1439
embryonic cell2.66e-0870

Uber anatomy
Ontology termp-valuen
central nervous system5.02e-4773
nervous system5.08e-4575
regional part of nervous system3.40e-3854
neural tube3.00e-3652
neural rod3.00e-3652
future spinal cord3.00e-3652
neural keel3.00e-3652
ectoderm-derived structure2.19e-3495
ectoderm2.19e-3495
presumptive ectoderm2.19e-3495
neurectoderm3.73e-3464
neural plate3.73e-3464
presumptive neural plate3.73e-3464
brain1.01e-3247
future brain1.01e-3247
regional part of brain1.03e-3146
anterior neural tube4.09e-2740
ecto-epithelium4.27e-2773
regional part of forebrain2.99e-2639
forebrain2.99e-2639
future forebrain2.99e-2639
gray matter1.62e-2534
pre-chordal neural plate4.90e-2449
brain grey matter3.57e-2229
regional part of telencephalon3.57e-2229
telencephalon3.57e-2229
structure with developmental contribution from neural crest2.07e-1892
cerebral cortex5.52e-1621
cerebral hemisphere5.52e-1621
pallium5.52e-1621
regional part of cerebral cortex1.61e-1317
occipital lobe1.18e-1010
visual cortex1.18e-1010
neocortex1.18e-1010
posterior neural tube3.26e-0912
chordal neural plate3.26e-0912
tube1.35e-08114
organ system subdivision7.87e-08194
basal ganglion2.52e-078
nuclear complex of neuraxis2.52e-078
aggregate regional part of brain2.52e-078
collection of basal ganglia2.52e-078
cerebral subcortex2.52e-078
anatomical conduit6.01e-07122
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