FFCP PHASE1:Mm9::chr6:115202281..115202317,-: Difference between revisions
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{{FFCP|EntrezGene=110595|HGNC=|MCL_coexpression_id=270|UniProt=Q9JHB3,Q3USH7|association_with_transcript=-414bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end|description=CAGE_peak_2_at_Timp4_5end|id=chr6:115202281..115202317,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002319,6.32e-08,43;CL:0000221,1.24e-07,44;CL:0000133,1.24e-07,44;CL:0002453,1.49e-07,8;CL:0000117,1.72e-07,23;CL:0000337,1.72e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.25e-13!52;UBERON:0005068!1.25e-13!52;UBERON:0006241!1.25e-13!52;UBERON:0007135!1.25e-13!52;UBERON:0001017!3.70e-13!73;UBERON:0005743!3.70e-13!73;UBERON:0000955!1.57e-12!50;UBERON:0006238!1.57e-12!50;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0002616!4.88e-12!49;UBERON:0004121!9.14e-12!102;UBERON:0000924!9.14e-12!102;UBERON:0006601!9.14e-12!102;UBERON:0002020!2.09e-11!34;UBERON:0002346!1.42e-09!71;UBERON:0003075!1.42e-09!71;UBERON:0007284!1.42e-09!71;UBERON:0000033!4.56e-09!63;UBERON:0003076!1.29e-08!12;UBERON:0003057!1.29e-08!12;UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0002021!2.02e-07!10;UBERON:0000411!2.02e-07!10;UBERON:0001950!2.02e-07!10;UBERON:0003080!2.46e-07!40;UBERON:0004111!5.04e-07!122;UBERON:0000025!6.68e-07!114;UBERON:0002780!9.00e-07!39;UBERON:0001890!9.00e-07!39;UBERON:0006240!9.00e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-26,54;UBERON:0001017,4.54e-25,73;UBERON:0001016,4.38e-24,75;UBERON:0001049,8.26e-24,52;UBERON:0005068,8.26e-24,52;UBERON:0006241,8.26e-24,52;UBERON:0007135,8.26e-24,52;UBERON:0000955,3.29e-19,47;UBERON:0006238,3.29e-19,47;UBERON:0002020,3.57e-19,34;UBERON:0004121,1.06e-18,95;UBERON:0000924,1.06e-18,95;UBERON:0006601,1.06e-18,95;UBERON:0002616,2.55e-18,46;UBERON:0002346,1.66e-17,64;UBERON:0003075,1.66e-17,64;UBERON:0007284,1.66e-17,64;UBERON:0010371,2.99e-15,73;UBERON:0003528,5.01e-15,29;UBERON:0002791,5.01e-15,29;UBERON:0001893,5.01e-15,29;UBERON:0010314,8.33e-15,92;UBERON:0003080,9.35e-14,40;UBERON:0002780,1.18e-12,39;UBERON:0001890,1.18e-12,39;UBERON:0006240,1.18e-12,39;UBERON:0002021,1.36e-12,10;UBERON:0000411,1.36e-12,10;UBERON:0001950,1.36e-12,10;UBERON:0004111,2.10e-12,122;UBERON:0003076,7.99e-12,12;UBERON:0003057,7.99e-12,12;UBERON:0000025,1.17e-11,114;UBERON:0002619,2.82e-11,17;UBERON:0000956,3.71e-10,21;UBERON:0001869,3.71e-10,21;UBERON:0000203,3.71e-10,21;UBERON:0003056,4.74e-10,49;UBERON:0002950,1.67e-07,4;UBERON:0001891,1.67e-07,4;UBERON:0009616,1.67e-07,4;UBERON:0010286,1.67e-07,4;UBERON:0002240,4.28e-07,6;UBERON:0005174,4.28e-07,6;UBERON:0001137,4.28e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,2.39827672018491,2.19686182734472,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,1.79760066311043,6.14749288514487,0,0,0,12.5686433137674,12.1477697523387,0,0,0,6.60695285996332,7.91661496128164,8.44835932909339,0.395658863190582,0.182975287204819,1.04182674111352,15.0758819460746,7.87867654044352,7.48711414106369,2.94628585473668,5.26775218956681,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0.470354828542819,0.251333182659351,0,3.32578520915797,0,0.161766849947409,1.98757366614354,1.93950101254089,0,0.292780797011547,1.25668024088073,0.255457055208591,0,0,0,8.53806644607489,5.49000723382352,1.00523481690292,5.38855392596057,2.81287003063364,8.72709787150152,6.81413304884582,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,1.28441876603886,0.16455984991348,0.656669856316381,2.67527071501324,2.63159977365598,1.09775057645525,6.1734952629771,5.67782861123144,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.827810238914197,9.63303539926752,9.61135830056066,0,5.30188947129183,0,0,0,0,0,0,0,0,0,1.60660658210904,3.69044221541498,0,0,4.61916344323099,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.42366414172764,1.10264199027481,0.32977250588296,1.61464426695906,0.180938774784468,0.596861720015682,0.820704498725306,0,15.2048747648618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.864090018773596,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.228620419965,0,0,0,0.467507608726276,1.58711268530648,0,0,0,1.15913756419314,0,0.183151624267265,0.214368379079066,0,1.6942555278512,3.68260189205742,2.29158205375759,6.35856774671644,2.74033007908257,2.2661816921691,3.37511250115903,2.70192721934532,5.43770890781046,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,1.2673964994512,0.565879024158229,0.561849044819294,0.448176066834085,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.887379030796687,0.953744759789284,0.581385666529314,0.282328141245992,0.676916863133412,0.548783918618318,0.789209134313529,0.814824683075171,1.12228454331548,0.593175090620871,0.689531376628944,1.22769312950907,1.08455788830176,0.385813221962283,0.499621155875892,1.16965804222704,1.93383948643468,4.3996316375834,1.10295709559758,0.695603506861264|short_description=p2@Timp4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110595 | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHB3,Q3USH7 | |||
|association_with_transcript=-414bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end | |||
|cluster_id=chr6:115202281..115202317,- | |||
|description=CAGE_peak_2_at_Timp4_5end | |||
|id=chr6:115202281..115202317,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.32e-08,43;CL:0000221,1.24e-07,44;CL:0000133,1.24e-07,44;CL:0002453,1.49e-07,8;CL:0000117,1.72e-07,23;CL:0000337,1.72e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-13!52;UBERON:0005068!1.25e-13!52;UBERON:0006241!1.25e-13!52;UBERON:0007135!1.25e-13!52;UBERON:0001017!3.70e-13!73;UBERON:0005743!3.70e-13!73;UBERON:0000955!1.57e-12!50;UBERON:0006238!1.57e-12!50;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0002616!4.88e-12!49;UBERON:0004121!9.14e-12!102;UBERON:0000924!9.14e-12!102;UBERON:0006601!9.14e-12!102;UBERON:0002020!2.09e-11!34;UBERON:0002346!1.42e-09!71;UBERON:0003075!1.42e-09!71;UBERON:0007284!1.42e-09!71;UBERON:0000033!4.56e-09!63;UBERON:0003076!1.29e-08!12;UBERON:0003057!1.29e-08!12;UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0002021!2.02e-07!10;UBERON:0000411!2.02e-07!10;UBERON:0001950!2.02e-07!10;UBERON:0003080!2.46e-07!40;UBERON:0004111!5.04e-07!122;UBERON:0000025!6.68e-07!114;UBERON:0002780!9.00e-07!39;UBERON:0001890!9.00e-07!39;UBERON:0006240!9.00e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-26,54;UBERON:0001017,4.54e-25,73;UBERON:0001016,4.38e-24,75;UBERON:0001049,8.26e-24,52;UBERON:0005068,8.26e-24,52;UBERON:0006241,8.26e-24,52;UBERON:0007135,8.26e-24,52;UBERON:0000955,3.29e-19,47;UBERON:0006238,3.29e-19,47;UBERON:0002020,3.57e-19,34;UBERON:0004121,1.06e-18,95;UBERON:0000924,1.06e-18,95;UBERON:0006601,1.06e-18,95;UBERON:0002616,2.55e-18,46;UBERON:0002346,1.66e-17,64;UBERON:0003075,1.66e-17,64;UBERON:0007284,1.66e-17,64;UBERON:0010371,2.99e-15,73;UBERON:0003528,5.01e-15,29;UBERON:0002791,5.01e-15,29;UBERON:0001893,5.01e-15,29;UBERON:0010314,8.33e-15,92;UBERON:0003080,9.35e-14,40;UBERON:0002780,1.18e-12,39;UBERON:0001890,1.18e-12,39;UBERON:0006240,1.18e-12,39;UBERON:0002021,1.36e-12,10;UBERON:0000411,1.36e-12,10;UBERON:0001950,1.36e-12,10;UBERON:0004111,2.10e-12,122;UBERON:0003076,7.99e-12,12;UBERON:0003057,7.99e-12,12;UBERON:0000025,1.17e-11,114;UBERON:0002619,2.82e-11,17;UBERON:0000956,3.71e-10,21;UBERON:0001869,3.71e-10,21;UBERON:0000203,3.71e-10,21;UBERON:0003056,4.74e-10,49;UBERON:0002950,1.67e-07,4;UBERON:0001891,1.67e-07,4;UBERON:0009616,1.67e-07,4;UBERON:0010286,1.67e-07,4;UBERON:0002240,4.28e-07,6;UBERON:0005174,4.28e-07,6;UBERON:0001137,4.28e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,2.39827672018491,2.19686182734472,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,1.79760066311043,6.14749288514487,0,0,0,12.5686433137674,12.1477697523387,0,0,0,6.60695285996332,7.91661496128164,8.44835932909339,0.395658863190582,0.182975287204819,1.04182674111352,15.0758819460746,7.87867654044352,7.48711414106369,2.94628585473668,5.26775218956681,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0.470354828542819,0.251333182659351,0,3.32578520915797,0,0.161766849947409,1.98757366614354,1.93950101254089,0,0.292780797011547,1.25668024088073,0.255457055208591,0,0,0,8.53806644607489,5.49000723382352,1.00523481690292,5.38855392596057,2.81287003063364,8.72709787150152,6.81413304884582,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,1.28441876603886,0.16455984991348,0.656669856316381,2.67527071501324,2.63159977365598,1.09775057645525,6.1734952629771,5.67782861123144,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.827810238914197,9.63303539926752,9.61135830056066,0,5.30188947129183,0,0,0,0,0,0,0,0,0,1.60660658210904,3.69044221541498,0,0,4.61916344323099,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.42366414172764,1.10264199027481,0.32977250588296,1.61464426695906,0.180938774784468,0.596861720015682,0.820704498725306,0,15.2048747648618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.864090018773596,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.228620419965,0,0,0,0.467507608726276,1.58711268530648,0,0,0,1.15913756419314,0,0.183151624267265,0.214368379079066,0,1.6942555278512,3.68260189205742,2.29158205375759,6.35856774671644,2.74033007908257,2.2661816921691,3.37511250115903,2.70192721934532,5.43770890781046,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,1.2673964994512,0.565879024158229,0.561849044819294,0.448176066834085,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.887379030796687,0.953744759789284,0.581385666529314,0.282328141245992,0.676916863133412,0.548783918618318,0.789209134313529,0.814824683075171,1.12228454331548,0.593175090620871,0.689531376628944,1.22769312950907,1.08455788830176,0.385813221962283,0.499621155875892,1.16965804222704,1.93383948643468,4.3996316375834,1.10295709559758,0.695603506861264 | |||
|short_description=p2@Timp4 | |||
}} |
Latest revision as of 11:55, 26 September 2015
Short description: | p2@Timp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Timp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | -414bp_to_ENSMUST00000032462, NM_080639, uc009dip.1, uc009diq.1_5end |
EntrezGene: | Timp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.32e-08 | 43 |
ectodermal cell | 1.24e-07 | 44 |
neurectodermal cell | 1.24e-07 | 44 |
oligodendrocyte precursor cell | 1.49e-07 | 8 |
CNS neuron (sensu Vertebrata) | 1.72e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-07 | 23 |