Personal tools

FFCP PHASE1:Mm9::chr15:100701101..100701133,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20273
|EntrezGene=20273
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9WTU3
|UniProt=Q9WTU3
|association_with_transcript=0bp_to_NM_001077499,uc007xsg.1,uc007xsh.1_5end
|association_with_transcript=0bp_to_NM_001077499,uc007xsg.1,uc007xsh.1_5end
|cluster_id=chr15:100701101..100701133,+
|description=CAGE_peak_3_at_Scn8a_5end
|description=CAGE_peak_3_at_Scn8a_5end
|id=chr15:100701101..100701133,+
|id=chr15:100701101..100701133,+
|ontology_enrichment_celltype=CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000221!4.45e-09!44;CL:0000133!4.45e-09!44;CL:0002319!1.18e-08!43;CL:0000117!3.23e-08!23;CL:0000337!3.23e-08!23;CL:0000393!5.04e-08!39;CL:0000211!5.04e-08!39
|ontology_enrichment_celltype=CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000221!4.45e-09!44;CL:0000133!4.45e-09!44;CL:0002319!1.18e-08!43;CL:0000117!3.23e-08!23;CL:0000337!3.23e-08!23;CL:0000393!5.04e-08!39;CL:0000211!5.04e-08!39
|ontology_enrichment_celltype_v019_2=CL:0002610,5.47e-08,3;CL:0002614,4.40e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.02e-28!102;UBERON:0000924!3.02e-28!102;UBERON:0006601!3.02e-28!102;UBERON:0002346!1.36e-27!71;UBERON:0003075!1.36e-27!71;UBERON:0007284!1.36e-27!71;UBERON:0000073!2.66e-27!75;UBERON:0001016!2.66e-27!75;UBERON:0000033!3.21e-27!63;UBERON:0001017!2.14e-26!73;UBERON:0005743!2.14e-26!73;UBERON:0000955!2.62e-23!50;UBERON:0006238!2.62e-23!50;UBERON:0002616!1.41e-22!49;UBERON:0001049!5.35e-22!52;UBERON:0005068!5.35e-22!52;UBERON:0006241!5.35e-22!52;UBERON:0007135!5.35e-22!52;UBERON:0003056!2.96e-21!49;UBERON:0003080!3.79e-17!40;UBERON:0002780!1.91e-16!39;UBERON:0001890!1.91e-16!39;UBERON:0006240!1.91e-16!39;UBERON:0007811!1.25e-15!86;UBERON:0002020!1.83e-14!34;UBERON:0002791!1.69e-13!29;UBERON:0003528!1.69e-13!29;UBERON:0001893!1.69e-13!29;UBERON:0000153!2.33e-12!94;UBERON:0000956!4.04e-09!21;UBERON:0001869!4.04e-09!21;UBERON:0000203!4.04e-09!21;UBERON:0002021!4.46e-09!10;UBERON:0000411!4.46e-09!10;UBERON:0001950!4.46e-09!10;UBERON:0002619!1.60e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.00e-34,54;UBERON:0001016,1.15e-33,75;UBERON:0001017,6.98e-33,73;UBERON:0001049,1.00e-30,52;UBERON:0005068,1.00e-30,52;UBERON:0006241,1.00e-30,52;UBERON:0007135,1.00e-30,52;UBERON:0000955,9.19e-30,47;UBERON:0006238,9.19e-30,47;UBERON:0002616,3.36e-28,46;UBERON:0004121,6.57e-28,95;UBERON:0000924,6.57e-28,95;UBERON:0006601,6.57e-28,95;UBERON:0002346,4.03e-27,64;UBERON:0003075,4.03e-27,64;UBERON:0007284,4.03e-27,64;UBERON:0010371,1.90e-24,73;UBERON:0003080,6.69e-23,40;UBERON:0002780,2.13e-21,39;UBERON:0001890,2.13e-21,39;UBERON:0006240,2.13e-21,39;UBERON:0003056,4.80e-21,49;UBERON:0002021,5.34e-21,10;UBERON:0000411,5.34e-21,10;UBERON:0001950,5.34e-21,10;UBERON:0010314,8.91e-18,92;UBERON:0002020,9.37e-17,34;UBERON:0003528,4.25e-16,29;UBERON:0002791,4.25e-16,29;UBERON:0001893,4.25e-16,29;UBERON:0002619,6.67e-14,17;UBERON:0000956,4.69e-13,21;UBERON:0001869,4.69e-13,21;UBERON:0000203,4.69e-13,21;UBERON:0000025,5.71e-11,114;UBERON:0004111,1.25e-10,122;UBERON:0002950,7.87e-09,4;UBERON:0001891,7.87e-09,4;UBERON:0009616,7.87e-09,4;UBERON:0010286,7.87e-09,4;UBERON:0011216,1.83e-08,194;UBERON:0003076,3.82e-08,12;UBERON:0003057,3.82e-08,12;UBERON:0004684,5.47e-08,3;UBERON:0002275,5.47e-08,3;UBERON:0002038,4.40e-07,3;UBERON:0009663,4.40e-07,3;UBERON:0009661,4.40e-07,3;UBERON:0000125,4.40e-07,3;UBERON:0002308,4.40e-07,3
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.810035629990144,0.210324961351382,0.285650984403804,1.54607978666129,0.367472397644862,0.479227355091182,0,8.8092704799511,14.300981865541,11.5204899942183,0.527545150920775,0.548925861614458,0.52091337055676,10.6089539620525,2.8138130501584,5.95913166329559,0.589257170947335,1.42371680799103,0,0.302904773332736,1.058001841495,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,7.61230072230023,8.58731497935166,0,0,0,0,6.14141621559773,6.8625090422794,0.879580464790051,10.2556348913443,12.7857728665165,4.57133698031032,5.02947915510049,0,0,0,0.420883711772948,0.520481771850815,0.689706313300419,0.540186389416048,1.05493372485001,0.476255494059295,0.896796041993948,1.21812241927647,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,7.99101804543684,0.617427674275707,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0.387904974335251,0.841629838683823,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.234690248288502,0.502518772325447,0,1.56106918286239,0,0.664394068946325,0.318909537314974,0,0,0,0,0.54390568381871,0,0,8.99083303931635,13.1277088983268,0,0,0,0.780877488593277,0.430846795465598,0.716906393857656,1.11399337041197,2.83076530788832,0.404810701674894,0.876767573733936,0.395287777946524,4.81981974632711,0,0,0,0,0,0.242780636154981,0.906970670894253,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0.646793418913773,0,1.24138163549592,0.535106452806212,1.31639216481697,1.2178597964584,0,0.21183207086382,0,0,0,0.180938774784468,0,0,0,10.5692422145991,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0.314578033277133,0.483168241652012,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,7.34177395402186,6.44455331110048,8.02053718815155,9.10821866421544,9.59115527678899,9.06472676867641,9.45031500324528,8.55610286126019,7.70342095273148,8.28416498802912,0.62272408550506,0.798049746802062,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0,0,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.579421629724277,0,0,0.147198920134397,0,0.177475806159338,0,0,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.543216455383447,1.12228454331548,0.593175090620871,0.29551344712669,0,0.464810523557898,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.810035629990144,0.210324961351382,0.285650984403804,1.54607978666129,0.367472397644862,0.479227355091182,0,8.8092704799511,14.300981865541,11.5204899942183,0.527545150920775,0.548925861614458,0.52091337055676,10.6089539620525,2.8138130501584,5.95913166329559,0.589257170947335,1.42371680799103,0,0.302904773332736,1.058001841495,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,7.61230072230023,8.58731497935166,0,0,0,0,6.14141621559773,6.8625090422794,0.879580464790051,10.2556348913443,12.7857728665165,4.57133698031032,5.02947915510049,0,0,0,0.420883711772948,0.520481771850815,0.689706313300419,0.540186389416048,1.05493372485001,0.476255494059295,0.896796041993948,1.21812241927647,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,7.99101804543684,0.617427674275707,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0.387904974335251,0.841629838683823,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.234690248288502,0.502518772325447,0,1.56106918286239,0,0.664394068946325,0.318909537314974,0,0,0,0,0.54390568381871,0,0,8.99083303931635,13.1277088983268,0,0,0,0.780877488593277,0.430846795465598,0.716906393857656,1.11399337041197,2.83076530788832,0.404810701674894,0.876767573733936,0.395287777946524,4.81981974632711,0,0,0,0,0,0.242780636154981,0.906970670894253,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0.646793418913773,0,1.24138163549592,0.535106452806212,1.31639216481697,1.2178597964584,0,0.21183207086382,0,0,0,0.180938774784468,0,0,0,10.5692422145991,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0.314578033277133,0.483168241652012,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,7.34177395402186,6.44455331110048,8.02053718815155,9.10821866421544,9.59115527678899,9.06472676867641,9.45031500324528,8.55610286126019,7.70342095273148,8.28416498802912,0.62272408550506,0.798049746802062,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0,0,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.579421629724277,0,0,0.147198920134397,0,0.177475806159338,0,0,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.543216455383447,1.12228454331548,0.593175090620871,0.29551344712669,0,0.464810523557898,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p3@Scn8a
|short_description=p3@Scn8a
}}
}}

Latest revision as of 12:35, 26 September 2015

Short description:p3@Scn8a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Scn8a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_001077499, uc007xsg.1, uc007xsh.1_5end
EntrezGene:Scn8a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Scn8a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A313.13
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron5.47e-083
neuron of the substantia nigra4.40e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.00e-3454
nervous system1.15e-3375
central nervous system6.98e-3373
neural tube1.00e-3052
neural rod1.00e-3052
future spinal cord1.00e-3052
neural keel1.00e-3052
brain9.19e-3047
future brain9.19e-3047
regional part of brain3.36e-2846
ectoderm-derived structure6.57e-2895
ectoderm6.57e-2895
presumptive ectoderm6.57e-2895
neurectoderm4.03e-2764
neural plate4.03e-2764
presumptive neural plate4.03e-2764
ecto-epithelium1.90e-2473
anterior neural tube6.69e-2340
regional part of forebrain2.13e-2139
forebrain2.13e-2139
future forebrain2.13e-2139
pre-chordal neural plate4.80e-2149
occipital lobe5.34e-2110
visual cortex5.34e-2110
neocortex5.34e-2110
structure with developmental contribution from neural crest8.91e-1892
gray matter9.37e-1734
brain grey matter4.25e-1629
regional part of telencephalon4.25e-1629
telencephalon4.25e-1629
regional part of cerebral cortex6.67e-1417
cerebral cortex4.69e-1321
cerebral hemisphere4.69e-1321
pallium4.69e-1321
tube5.71e-11114
anatomical conduit1.25e-10122
regional part of midbrain7.87e-094
midbrain7.87e-094
presumptive midbrain7.87e-094
midbrain neural tube7.87e-094
organ system subdivision1.83e-08194
posterior neural tube3.82e-0812
chordal neural plate3.82e-0812
raphe nuclei5.47e-083
reticular formation5.47e-083
substantia nigra4.40e-073
telencephalic nucleus4.40e-073
midbrain nucleus4.40e-073
neural nucleus4.40e-073
nucleus of brain4.40e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:100701101..100701133,%2B&oldid=4253815"