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FFCP PHASE1:Mm9::chr4:148960664..148960675,+: Difference between revisions

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(Created page with "{{FFCP |id=chr4:148960664..148960675,+ |short_description=p4@Clstn1 |description=CAGE_peak_4_at_Clstn1_5end |association_with_transcript=-71bp_to_ENSMUST00000039144,NM_023...")
 
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{{FFCP
{{FFCP
|id=chr4:148960664..148960675,+
|DHSsupport=NA
|short_description=p4@Clstn1
|DPIdataset=NA
|description=CAGE_peak_4_at_Clstn1_5end
|association_with_transcript=-71bp_to_ENSMUST00000039144,NM_023051,uc008vwo.1,uc008vwp.1_5end
|EntrezGene=65945
|EntrezGene=65945
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q9EPL2
|UniProt=Q9EPL2
|association_with_transcript=-71bp_to_ENSMUST00000039144,NM_023051,uc008vwo.1,uc008vwp.1_5end
|cluster_id=chr4:148960664..148960675,+
|description=CAGE_peak_4_at_Clstn1_5end
|id=chr4:148960664..148960675,+
|ontology_enrichment_celltype=CL:0000117!6.16e-10!23;CL:0000337!6.16e-10!23;CL:0000221!5.74e-08!44;CL:0000133!5.74e-08!44;CL:0002319!1.51e-07!43;CL:0000540!7.16e-07!33;CL:0000047!7.16e-07!33;CL:0000031!7.16e-07!33;CL:0000404!7.16e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-11,23;CL:0000337,1.08e-11,23;CL:0000540,3.45e-07,33;CL:0000047,3.45e-07,33;CL:0000031,3.45e-07,33;CL:0000404,3.45e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.86e-26!63;UBERON:0004121!1.70e-22!102;UBERON:0000924!1.70e-22!102;UBERON:0006601!1.70e-22!102;UBERON:0001049!2.55e-22!52;UBERON:0005068!2.55e-22!52;UBERON:0006241!2.55e-22!52;UBERON:0007135!2.55e-22!52;UBERON:0001017!3.04e-22!73;UBERON:0005743!3.04e-22!73;UBERON:0000073!8.61e-22!75;UBERON:0001016!8.61e-22!75;UBERON:0000955!2.33e-21!50;UBERON:0006238!2.33e-21!50;UBERON:0002616!9.35e-21!49;UBERON:0002346!1.41e-20!71;UBERON:0003075!1.41e-20!71;UBERON:0007284!1.41e-20!71;UBERON:0003056!4.85e-18!49;UBERON:0002020!1.53e-17!34;UBERON:0007811!1.60e-16!86;UBERON:0003080!4.59e-15!40;UBERON:0002791!1.32e-14!29;UBERON:0003528!1.32e-14!29;UBERON:0001893!1.32e-14!29;UBERON:0002780!2.05e-14!39;UBERON:0001890!2.05e-14!39;UBERON:0006240!2.05e-14!39;UBERON:0000153!5.57e-14!94;UBERON:0000956!6.15e-11!21;UBERON:0001869!6.15e-11!21;UBERON:0000203!6.15e-11!21;UBERON:0002619!3.56e-10!17;UBERON:0002021!3.93e-09!10;UBERON:0000411!3.93e-09!10;UBERON:0001950!3.93e-09!10;UBERON:0003076!3.95e-08!12;UBERON:0003057!3.95e-08!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.10e-31,54;UBERON:0004121,1.77e-30,95;UBERON:0000924,1.77e-30,95;UBERON:0006601,1.77e-30,95;UBERON:0002346,5.52e-30,64;UBERON:0003075,5.52e-30,64;UBERON:0007284,5.52e-30,64;UBERON:0001017,4.51e-29,73;UBERON:0001049,4.68e-28,52;UBERON:0005068,4.68e-28,52;UBERON:0006241,4.68e-28,52;UBERON:0007135,4.68e-28,52;UBERON:0001016,4.86e-28,75;UBERON:0010371,9.70e-27,73;UBERON:0002020,2.35e-24,34;UBERON:0000955,1.16e-21,47;UBERON:0006238,1.16e-21,47;UBERON:0002616,1.71e-20,46;UBERON:0002021,2.17e-20,10;UBERON:0000411,2.17e-20,10;UBERON:0001950,2.17e-20,10;UBERON:0003056,4.01e-20,49;UBERON:0010314,2.80e-19,92;UBERON:0002619,3.30e-18,17;UBERON:0003528,6.32e-18,29;UBERON:0002791,6.32e-18,29;UBERON:0001893,6.32e-18,29;UBERON:0003080,1.38e-16,40;UBERON:0000956,1.65e-16,21;UBERON:0001869,1.65e-16,21;UBERON:0000203,1.65e-16,21;UBERON:0002780,2.43e-15,39;UBERON:0001890,2.43e-15,39;UBERON:0006240,2.43e-15,39;UBERON:0003076,5.71e-13,12;UBERON:0003057,5.71e-13,12;UBERON:0002240,8.21e-10,6;UBERON:0005174,8.21e-10,6;UBERON:0001137,8.21e-10,6;UBERON:0004111,1.56e-09,122;UBERON:0000025,1.98e-08,114;UBERON:0001948,2.82e-08,5;UBERON:0002315,2.82e-08,5;UBERON:0011216,8.48e-07,194
|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0.782391344348039,0.65407546914134,1.97717564461025,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,1.61853168687678,2.64495489636016,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,2.57085885963423,1.32521124570968,0.367472397644862,0.287536413054709,0,4.40463523997555,5.61824287574826,4.30098293117482,1.05509030184155,0.457438218012048,0.52091337055676,3.90856198601933,1.12552522006336,0.916789486660861,2.06240009831567,1.85083185038834,2.98239113320481,0.302904773332736,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,1.40843419776681,2.56652954828636,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,5.23616767033638,0.255457055208591,0,0,0,3.2953940669061,1.83000241127451,0.628271760564322,11.4724051326902,16.1100738118108,3.1168206683934,3.24482526135515,0,0.124406970610093,0,1.26265113531884,0.260240885925407,0,0.540186389416048,0.452114453507145,1.15662048557257,3.07472928683639,2.43624483855295,3.88055056108524,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0.134206418760372,5.25724871410318,2.6755199218614,0.660837565967596,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.329397909448022,0,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,2.0871576698413,3.98519734413491,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,1.92792789853084,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0.727067458955011,0.712994756769443,0.948110273807448,3.16255825724996,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0.441056796109924,0.16488625294148,0,0.120625849856312,0.119372344003136,0.492422699235184,0,3.15223013417866,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,1.86401793926078,0.56369293868419,0,0.165458490457098,0,0.129159823477731,0,0,0,0.419437377702843,0,0,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,1.00314420807073,12.9892923801925,11.9684561491866,13.7494923225455,28.1839219043648,19.8673930733486,17.3740596399631,13.5004500046361,19.3638117386415,14.0474146785103,22.2636934053283,0.103787347584177,0.399024873401031,0.682934423016537,0.972426868273176,0,0,0,0.412070114477788,0.64183841918363,0.252697211763798,0,0.188626341386076,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0.964546102318525,0,0.147198920134397,0,0,0,0,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0.882365676478062,0.231867835620421
|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0.782391344348039,0.65407546914134,1.97717564461025,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,1.61853168687678,2.64495489636016,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,2.57085885963423,1.32521124570968,0.367472397644862,0.287536413054709,0,4.40463523997555,5.61824287574826,4.30098293117482,1.05509030184155,0.457438218012048,0.52091337055676,3.90856198601933,1.12552522006336,0.916789486660861,2.06240009831567,1.85083185038834,2.98239113320481,0.302904773332736,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,1.40843419776681,2.56652954828636,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,5.23616767033638,0.255457055208591,0,0,0,3.2953940669061,1.83000241127451,0.628271760564322,11.4724051326902,16.1100738118108,3.1168206683934,3.24482526135515,0,0.124406970610093,0,1.26265113531884,0.260240885925407,0,0.540186389416048,0.452114453507145,1.15662048557257,3.07472928683639,2.43624483855295,3.88055056108524,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0.134206418760372,5.25724871410318,2.6755199218614,0.660837565967596,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.329397909448022,0,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,2.0871576698413,3.98519734413491,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,1.92792789853084,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0.727067458955011,0.712994756769443,0.948110273807448,3.16255825724996,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0.441056796109924,0.16488625294148,0,0.120625849856312,0.119372344003136,0.492422699235184,0,3.15223013417866,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,1.86401793926078,0.56369293868419,0,0.165458490457098,0,0.129159823477731,0,0,0,0.419437377702843,0,0,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,1.00314420807073,12.9892923801925,11.9684561491866,13.7494923225455,28.1839219043648,19.8673930733486,17.3740596399631,13.5004500046361,19.3638117386415,14.0474146785103,22.2636934053283,0.103787347584177,0.399024873401031,0.682934423016537,0.972426868273176,0,0,0,0.412070114477788,0.64183841918363,0.252697211763798,0,0.188626341386076,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0.964546102318525,0,0.147198920134397,0,0,0,0,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0.882365676478062,0.231867835620421
|short_description=p4@Clstn1
}}
}}

Latest revision as of 17:44, 26 September 2015

Short description:p4@Clstn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Clstn1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -71bp_to_ENSMUST00000039144, NM_023051, uc008vwo.1, uc008vwp.1_5end
EntrezGene:Clstn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Clstn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.18
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.08e-1123
neuroblast (sensu Vertebrata)1.08e-1123
neuron3.45e-0733
neuronal stem cell3.45e-0733
neuroblast3.45e-0733
electrically signaling cell3.45e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.10e-3154
ectoderm-derived structure1.77e-3095
ectoderm1.77e-3095
presumptive ectoderm1.77e-3095
neurectoderm5.52e-3064
neural plate5.52e-3064
presumptive neural plate5.52e-3064
central nervous system4.51e-2973
neural tube4.68e-2852
neural rod4.68e-2852
future spinal cord4.68e-2852
neural keel4.68e-2852
nervous system4.86e-2875
ecto-epithelium9.70e-2773
gray matter2.35e-2434
brain1.16e-2147
future brain1.16e-2147
regional part of brain1.71e-2046
occipital lobe2.17e-2010
visual cortex2.17e-2010
neocortex2.17e-2010
pre-chordal neural plate4.01e-2049
structure with developmental contribution from neural crest2.80e-1992
regional part of cerebral cortex3.30e-1817
brain grey matter6.32e-1829
regional part of telencephalon6.32e-1829
telencephalon6.32e-1829
anterior neural tube1.38e-1640
cerebral cortex1.65e-1621
cerebral hemisphere1.65e-1621
pallium1.65e-1621
regional part of forebrain2.43e-1539
forebrain2.43e-1539
future forebrain2.43e-1539
posterior neural tube5.71e-1312
chordal neural plate5.71e-1312
spinal cord8.21e-106
dorsal region element8.21e-106
dorsum8.21e-106
anatomical conduit1.56e-09122
tube1.98e-08114
regional part of spinal cord2.82e-085
gray matter of spinal cord2.82e-085
organ system subdivision8.48e-07194
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