FFCP PHASE1:Mm9::chr1:191167221..191167237,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16526|HGNC=|MCL_coexpression_id=2|UniProt=Q4VQI2,Q6P6P9|association_with_transcript=0bp_to_NM_001159850,uc007eak.2_5end|description=CAGE_peak_2_at_Kcnk2_5end|id=chr1:191167221..191167237,-|ontology_enrichment_celltype=CL:0000117!2.17e-11!23;CL:0000337!2.17e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-11,23;CL:0000337,2.48e-11,23;CL:0002319,5.64e-08,43;CL:0000221,1.09e-07,44;CL:0000133,1.09e-07,44;CL:0000540,8.63e-07,33;CL:0000047,8.63e-07,33;CL:0000031,8.63e-07,33;CL:0000404,8.63e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.40e-27!52;UBERON:0005068!5.40e-27!52;UBERON:0006241!5.40e-27!52;UBERON:0007135!5.40e-27!52;UBERON:0000955!1.31e-26!50;UBERON:0006238!1.31e-26!50;UBERON:0002616!2.31e-26!49;UBERON:0000033!5.50e-24!63;UBERON:0003080!1.11e-23!40;UBERON:0002780!3.76e-23!39;UBERON:0001890!3.76e-23!39;UBERON:0006240!3.76e-23!39;UBERON:0003056!2.58e-22!49;UBERON:0002346!3.55e-22!71;UBERON:0003075!3.55e-22!71;UBERON:0007284!3.55e-22!71;UBERON:0001017!4.66e-22!73;UBERON:0005743!4.66e-22!73;UBERON:0000073!1.28e-21!75;UBERON:0001016!1.28e-21!75;UBERON:0002020!3.30e-20!34;UBERON:0004121!3.56e-20!102;UBERON:0000924!3.56e-20!102;UBERON:0006601!3.56e-20!102;UBERON:0007811!3.48e-19!86;UBERON:0002791!3.27e-18!29;UBERON:0003528!3.27e-18!29;UBERON:0001893!3.27e-18!29;UBERON:0000153!3.09e-17!94;UBERON:0000956!2.03e-14!21;UBERON:0001869!2.03e-14!21;UBERON:0000203!2.03e-14!21;UBERON:0000025!2.95e-13!114;UBERON:0004111!3.89e-13!122;UBERON:0002619!5.59e-12!17;UBERON:0000475!1.21e-10!200;UBERON:0000477!2.55e-09!154;UBERON:0002021!3.00e-08!10;UBERON:0000411!3.00e-08!10;UBERON:0001950!3.00e-08!10;UBERON:0000483!9.45e-08!181;UBERON:0000119!2.80e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.98e-40,40;UBERON:0000073,8.67e-40,54;UBERON:0002780,2.93e-39,39;UBERON:0001890,2.93e-39,39;UBERON:0006240,2.93e-39,39;UBERON:0002616,2.65e-38,46;UBERON:0000955,2.90e-37,47;UBERON:0006238,2.90e-37,47;UBERON:0001049,5.20e-37,52;UBERON:0005068,5.20e-37,52;UBERON:0006241,5.20e-37,52;UBERON:0007135,5.20e-37,52;UBERON:0003056,4.84e-33,49;UBERON:0001017,2.96e-31,73;UBERON:0003528,4.10e-31,29;UBERON:0002791,4.10e-31,29;UBERON:0001893,4.10e-31,29;UBERON:0001016,4.17e-30,75;UBERON:0002020,4.93e-30,34;UBERON:0002346,1.26e-29,64;UBERON:0003075,1.26e-29,64;UBERON:0007284,1.26e-29,64;UBERON:0010371,4.30e-26,73;UBERON:0000956,8.07e-26,21;UBERON:0001869,8.07e-26,21;UBERON:0000203,8.07e-26,21;UBERON:0004121,9.18e-24,95;UBERON:0000924,9.18e-24,95;UBERON:0006601,9.18e-24,95;UBERON:0002619,2.04e-20,17;UBERON:0010314,1.64e-18,92;UBERON:0000025,5.22e-18,114;UBERON:0004111,5.71e-17,122;UBERON:0002021,2.33e-14,10;UBERON:0000411,2.33e-14,10;UBERON:0001950,2.33e-14,10;UBERON:0011216,1.52e-11,194;UBERON:0000483,2.22e-10,174;UBERON:0000119,4.02e-10,176;UBERON:0001894,9.49e-09,10;UBERON:0006222,9.49e-09,10;UBERON:0000369,6.07e-08,5;UBERON:0002435,6.07e-08,5;UBERON:0000204,6.07e-08,5;UBERON:0010082,6.07e-08,5;UBERON:0001954,1.33e-07,7;UBERON:0003022,1.33e-07,7;UBERON:0002421,1.33e-07,7;UBERON:0000349,1.33e-07,7;UBERON:0002600,1.33e-07,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.97717564461025,2.91644848611425,0.419959264876088,0,0,0,0,0.771778308107841,0.286533439938757,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0.898800331555214,1.53687322128622,2.38486108309499,3.24014251996058,2.10324961351382,0.571301968807607,0.883474163806454,1.22490799214954,0.958454710182364,3.67687514644008,3.30347642998166,2.042997409363,0.921639199537461,2.63772575460388,2.28719109006024,1.04182674111352,0.558365998002762,0.56276261003168,2.29197371665215,3.83017161115768,1.42371680799103,0.931997229126503,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0.628332956648377,0,0,0,0.647067399789637,1.98757366614354,0.484875253135222,0,0.585561594023094,0.83778682725382,0,0,0,0,1.49790639404823,6.8625090422794,3.5183218591602,2.78118912307642,4.60287823194595,1.0389402227978,4.2182728397617,0.305518091550949,0.373220911830279,0.505445516867349,0.420883711772948,1.17108398666433,0,0.360124259610698,0.60281927134286,0.476255494059295,0.384341160854549,0.749613796477831,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,2.13417703302824,0.891756905004413,0,0.439100230582101,0.268412837520744,1.89260953707715,5.14523061896422,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0.403367049246685,0.667134131534611,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,1.08069024937347,0.199141273254367,0,0.456994050438915,0,0.407302655690628,0,0.561086559122548,0.632365371242573,0.885660887877613,0.784993639206874,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,2.77129785249907,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0.975668239288994,1.10344600874334,2.21464689648775,0.956728611944923,1.63863314715738,1.89953480052485,1.73578870297814,0,0,0,0.275936746304732,0.963303539926752,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,6.12791290356818,1.08036656418786,0.776152102696527,1.28602221018955,2.48276327099183,3.74574516964348,4.27827453565514,0.304464949114599,0.23467170806371,0,0,1.48397627647332,0,0.844380948994182,0.358117032009409,0.984845398470368,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.436725127492355,0,0.247960367176008,0,0.648074866458964,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.405450430580328,1.23253148597793,1.68897069871134,0.716106782669926,0,0.600977247599844,0.443068581523732,0.605798699688886,0.381034033274999,0.806609481094724,0.292373642219257,0.288635524920988,0.350630706544707,0.453460767230423,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,1.07184189539533,0.501572104035363,12.9892923801925,11.0478056761722,9.16632821503035,10.6548973053086,0.685082519770642,6.7985450765073,6.75022500231806,7.20513925158753,6.34399372577886,6.73088405277366,0.103787347584177,0,0.170733605754134,0.486213434136588,0.628839487883947,0,0,0.206035057238894,0,0,0,0.565879024158229,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.470546902076653,0.423073039458382,0.548783918618318,0.789209134313529,0.135804113845862,0,0.118635018124174,0.591026894253381,1.63692417267876,0,0.192906610981141,1.49886346762768,0.935726433781634,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p2@Kcnk2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16526 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q4VQI2,Q6P6P9 | |||
|association_with_transcript=0bp_to_NM_001159850,uc007eak.2_5end | |||
|cluster_id=chr1:191167221..191167237,- | |||
|description=CAGE_peak_2_at_Kcnk2_5end | |||
|id=chr1:191167221..191167237,- | |||
|ontology_enrichment_celltype=CL:0000117!2.17e-11!23;CL:0000337!2.17e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-11,23;CL:0000337,2.48e-11,23;CL:0002319,5.64e-08,43;CL:0000221,1.09e-07,44;CL:0000133,1.09e-07,44;CL:0000540,8.63e-07,33;CL:0000047,8.63e-07,33;CL:0000031,8.63e-07,33;CL:0000404,8.63e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.40e-27!52;UBERON:0005068!5.40e-27!52;UBERON:0006241!5.40e-27!52;UBERON:0007135!5.40e-27!52;UBERON:0000955!1.31e-26!50;UBERON:0006238!1.31e-26!50;UBERON:0002616!2.31e-26!49;UBERON:0000033!5.50e-24!63;UBERON:0003080!1.11e-23!40;UBERON:0002780!3.76e-23!39;UBERON:0001890!3.76e-23!39;UBERON:0006240!3.76e-23!39;UBERON:0003056!2.58e-22!49;UBERON:0002346!3.55e-22!71;UBERON:0003075!3.55e-22!71;UBERON:0007284!3.55e-22!71;UBERON:0001017!4.66e-22!73;UBERON:0005743!4.66e-22!73;UBERON:0000073!1.28e-21!75;UBERON:0001016!1.28e-21!75;UBERON:0002020!3.30e-20!34;UBERON:0004121!3.56e-20!102;UBERON:0000924!3.56e-20!102;UBERON:0006601!3.56e-20!102;UBERON:0007811!3.48e-19!86;UBERON:0002791!3.27e-18!29;UBERON:0003528!3.27e-18!29;UBERON:0001893!3.27e-18!29;UBERON:0000153!3.09e-17!94;UBERON:0000956!2.03e-14!21;UBERON:0001869!2.03e-14!21;UBERON:0000203!2.03e-14!21;UBERON:0000025!2.95e-13!114;UBERON:0004111!3.89e-13!122;UBERON:0002619!5.59e-12!17;UBERON:0000475!1.21e-10!200;UBERON:0000477!2.55e-09!154;UBERON:0002021!3.00e-08!10;UBERON:0000411!3.00e-08!10;UBERON:0001950!3.00e-08!10;UBERON:0000483!9.45e-08!181;UBERON:0000119!2.80e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.98e-40,40;UBERON:0000073,8.67e-40,54;UBERON:0002780,2.93e-39,39;UBERON:0001890,2.93e-39,39;UBERON:0006240,2.93e-39,39;UBERON:0002616,2.65e-38,46;UBERON:0000955,2.90e-37,47;UBERON:0006238,2.90e-37,47;UBERON:0001049,5.20e-37,52;UBERON:0005068,5.20e-37,52;UBERON:0006241,5.20e-37,52;UBERON:0007135,5.20e-37,52;UBERON:0003056,4.84e-33,49;UBERON:0001017,2.96e-31,73;UBERON:0003528,4.10e-31,29;UBERON:0002791,4.10e-31,29;UBERON:0001893,4.10e-31,29;UBERON:0001016,4.17e-30,75;UBERON:0002020,4.93e-30,34;UBERON:0002346,1.26e-29,64;UBERON:0003075,1.26e-29,64;UBERON:0007284,1.26e-29,64;UBERON:0010371,4.30e-26,73;UBERON:0000956,8.07e-26,21;UBERON:0001869,8.07e-26,21;UBERON:0000203,8.07e-26,21;UBERON:0004121,9.18e-24,95;UBERON:0000924,9.18e-24,95;UBERON:0006601,9.18e-24,95;UBERON:0002619,2.04e-20,17;UBERON:0010314,1.64e-18,92;UBERON:0000025,5.22e-18,114;UBERON:0004111,5.71e-17,122;UBERON:0002021,2.33e-14,10;UBERON:0000411,2.33e-14,10;UBERON:0001950,2.33e-14,10;UBERON:0011216,1.52e-11,194;UBERON:0000483,2.22e-10,174;UBERON:0000119,4.02e-10,176;UBERON:0001894,9.49e-09,10;UBERON:0006222,9.49e-09,10;UBERON:0000369,6.07e-08,5;UBERON:0002435,6.07e-08,5;UBERON:0000204,6.07e-08,5;UBERON:0010082,6.07e-08,5;UBERON:0001954,1.33e-07,7;UBERON:0003022,1.33e-07,7;UBERON:0002421,1.33e-07,7;UBERON:0000349,1.33e-07,7;UBERON:0002600,1.33e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.97717564461025,2.91644848611425,0.419959264876088,0,0,0,0,0.771778308107841,0.286533439938757,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0.898800331555214,1.53687322128622,2.38486108309499,3.24014251996058,2.10324961351382,0.571301968807607,0.883474163806454,1.22490799214954,0.958454710182364,3.67687514644008,3.30347642998166,2.042997409363,0.921639199537461,2.63772575460388,2.28719109006024,1.04182674111352,0.558365998002762,0.56276261003168,2.29197371665215,3.83017161115768,1.42371680799103,0.931997229126503,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0.628332956648377,0,0,0,0.647067399789637,1.98757366614354,0.484875253135222,0,0.585561594023094,0.83778682725382,0,0,0,0,1.49790639404823,6.8625090422794,3.5183218591602,2.78118912307642,4.60287823194595,1.0389402227978,4.2182728397617,0.305518091550949,0.373220911830279,0.505445516867349,0.420883711772948,1.17108398666433,0,0.360124259610698,0.60281927134286,0.476255494059295,0.384341160854549,0.749613796477831,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,2.13417703302824,0.891756905004413,0,0.439100230582101,0.268412837520744,1.89260953707715,5.14523061896422,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0.403367049246685,0.667134131534611,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,1.08069024937347,0.199141273254367,0,0.456994050438915,0,0.407302655690628,0,0.561086559122548,0.632365371242573,0.885660887877613,0.784993639206874,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,2.77129785249907,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0.975668239288994,1.10344600874334,2.21464689648775,0.956728611944923,1.63863314715738,1.89953480052485,1.73578870297814,0,0,0,0.275936746304732,0.963303539926752,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,6.12791290356818,1.08036656418786,0.776152102696527,1.28602221018955,2.48276327099183,3.74574516964348,4.27827453565514,0.304464949114599,0.23467170806371,0,0,1.48397627647332,0,0.844380948994182,0.358117032009409,0.984845398470368,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.436725127492355,0,0.247960367176008,0,0.648074866458964,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.405450430580328,1.23253148597793,1.68897069871134,0.716106782669926,0,0.600977247599844,0.443068581523732,0.605798699688886,0.381034033274999,0.806609481094724,0.292373642219257,0.288635524920988,0.350630706544707,0.453460767230423,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,1.07184189539533,0.501572104035363,12.9892923801925,11.0478056761722,9.16632821503035,10.6548973053086,0.685082519770642,6.7985450765073,6.75022500231806,7.20513925158753,6.34399372577886,6.73088405277366,0.103787347584177,0,0.170733605754134,0.486213434136588,0.628839487883947,0,0,0.206035057238894,0,0,0,0.565879024158229,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.470546902076653,0.423073039458382,0.548783918618318,0.789209134313529,0.135804113845862,0,0.118635018124174,0.591026894253381,1.63692417267876,0,0.192906610981141,1.49886346762768,0.935726433781634,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@Kcnk2 | |||
}} |
Latest revision as of 23:38, 26 September 2015
Short description: | p2@Kcnk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_NM_001159850, uc007eak.2_5end |
EntrezGene: | Kcnk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.48e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.48e-11 | 23 |
neural cell | 5.64e-08 | 43 |
ectodermal cell | 1.09e-07 | 44 |
neurectodermal cell | 1.09e-07 | 44 |
neuron | 8.63e-07 | 33 |
neuronal stem cell | 8.63e-07 | 33 |
neuroblast | 8.63e-07 | 33 |
electrically signaling cell | 8.63e-07 | 33 |