FFCP PHASE1:Mm9::chr18:34533156..34533174,-: Difference between revisions
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{{FFCP|EntrezGene=13476|HGNC=|MCL_coexpression_id=13|UniProt=G3X8R0,Q9CQG4|association_with_transcript=-87bp_to_ENSMUST00000006027,NM_007874,uc008eki.2_5end|description=CAGE_peak_2_at_Reep5_5end|id=chr18:34533156..34533174,-|ontology_enrichment_celltype=CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0002319!7.71e-09!43;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0000540!4.14e-08!33;CL:0000047!4.14e-08!33;CL:0000031!4.14e-08!33;CL:0000404!4.14e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.09e-17,23;CL:0000337,6.09e-17,23;CL:0002319,4.15e-11,43;CL:0000221,1.25e-10,44;CL:0000133,1.25e-10,44;CL:0000540,2.56e-09,33;CL:0000047,2.56e-09,33;CL:0000031,2.56e-09,33;CL:0000404,2.56e-09,33;CL:0000393,9.16e-07,39;CL:0000211,9.16e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.04e-20!52;UBERON:0005068!8.04e-20!52;UBERON:0006241!8.04e-20!52;UBERON:0007135!8.04e-20!52;UBERON:0001017!1.94e-19!73;UBERON:0005743!1.94e-19!73;UBERON:0000073!9.75e-19!75;UBERON:0001016!9.75e-19!75;UBERON:0002346!1.70e-18!71;UBERON:0003075!1.70e-18!71;UBERON:0007284!1.70e-18!71;UBERON:0000955!1.95e-18!50;UBERON:0006238!1.95e-18!50;UBERON:0002616!7.01e-18!49;UBERON:0004121!5.23e-17!102;UBERON:0000924!5.23e-17!102;UBERON:0006601!5.23e-17!102;UBERON:0000033!1.35e-16!63;UBERON:0002020!1.73e-16!34;UBERON:0003080!2.28e-14!40;UBERON:0002780!5.61e-14!39;UBERON:0001890!5.61e-14!39;UBERON:0006240!5.61e-14!39;UBERON:0002791!2.64e-13!29;UBERON:0003528!2.64e-13!29;UBERON:0001893!2.64e-13!29;UBERON:0003056!4.57e-13!49;UBERON:0000956!7.90e-09!21;UBERON:0001869!7.90e-09!21;UBERON:0000203!7.90e-09!21;UBERON:0000025!1.01e-08!114;UBERON:0004111!1.44e-08!122;UBERON:0002619!1.72e-07!17;UBERON:0007811!9.97e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.70e-29,54;UBERON:0001049,3.57e-27,52;UBERON:0005068,3.57e-27,52;UBERON:0006241,3.57e-27,52;UBERON:0007135,3.57e-27,52;UBERON:0001017,3.32e-26,73;UBERON:0001016,5.81e-25,75;UBERON:0002020,9.39e-24,34;UBERON:0000955,1.89e-22,47;UBERON:0006238,1.89e-22,47;UBERON:0002616,1.19e-21,46;UBERON:0002346,1.50e-21,64;UBERON:0003075,1.50e-21,64;UBERON:0007284,1.50e-21,64;UBERON:0010314,2.28e-21,92;UBERON:0003080,4.79e-19,40;UBERON:0003528,5.55e-19,29;UBERON:0002791,5.55e-19,29;UBERON:0001893,5.55e-19,29;UBERON:0002780,1.81e-18,39;UBERON:0001890,1.81e-18,39;UBERON:0006240,1.81e-18,39;UBERON:0004121,1.20e-17,95;UBERON:0000924,1.20e-17,95;UBERON:0006601,1.20e-17,95;UBERON:0010371,8.93e-17,73;UBERON:0003056,9.23e-16,49;UBERON:0000956,2.73e-12,21;UBERON:0001869,2.73e-12,21;UBERON:0000203,2.73e-12,21;UBERON:0000025,5.34e-11,114;UBERON:0002619,2.72e-10,17;UBERON:0004111,3.87e-09,122;UBERON:0003076,1.11e-08,12;UBERON:0003057,1.11e-08,12;UBERON:0002420,4.35e-08,8;UBERON:0007245,4.35e-08,8;UBERON:0010009,4.35e-08,8;UBERON:0010011,4.35e-08,8;UBERON:0000454,4.35e-08,8;UBERON:0002021,6.27e-07,10;UBERON:0000411,6.27e-07,10;UBERON:0001950,6.27e-07,10;UBERON:0002240,8.81e-07,6;UBERON:0005174,8.81e-07,6;UBERON:0001137,8.81e-07,6|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0.171217968225505,0.319088635981346,0,0.174840804837995,0,0,0.699561878128147,0.315462165358238,0.274228867211478,0,0.935476191661768,0.198581902401771,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0.251793635951155,0.101376931219515,0.183546752161682,3.12956537739216,1.74420125104357,3.07560655828261,2.3331587888914,0.139986421625363,0,0.335565212115473,0,0,0.514518872071894,0.85960031981627,0.515672092277442,2.63011399117477,5.28990979272033,2.53532561402472,2.03306719241479,0.889294796111139,1.3498495759221,4.94433181283487,0.7104801149461,2.09720077362883,2.68952813725088,1.03689612308478,1.21505344498522,1.47227472945967,5.42736870367227,4.41737081903227,1.95985278743926,1.43768206527355,0.919218786610021,7.70811166995721,3.06449611404451,2.30409799884365,2.50583946687368,3.65950574409639,3.64639359389732,4.4669279840221,2.8138130501584,2.29197371665215,3.83017161115768,3.13217697758026,2.79599168737951,0.227178579999552,0.604572480854284,1.44932244350839,0,0,0,0,0,1.40444420131752,1.36344258062446,0,0,0.563373679106722,0,0,0,0.432982082022428,1.01343946190039,0,0.22836775943812,0.517875767294343,1.1875371125186,1.21439728736295,1.52232739156071,0.922461989024234,0.301445281105245,1.41106448562846,0.879666139307728,0.247194967734374,0.289198713839823,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0.292780797011547,1.46612694769419,0.255457055208591,0.958520996047362,0.599902730993408,0.254140454146129,1.49790639404823,2.28750301409313,4.14659361972453,5.04090528557602,3.3243009452943,3.94797284663164,2.59586020908412,1.2220723662038,0.497627882440372,0.758168275301024,0.210441855886474,0.390361328888111,1.14951052216736,0.540186389416048,0.60281927134286,1.02054748726992,0.512454881139399,0.749613796477831,1.03481348295606,0.646703978798527,0.378212160335639,0.70380449665579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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13476 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8R0,Q9CQG4 | |||
|association_with_transcript=-87bp_to_ENSMUST00000006027,NM_007874,uc008eki.2_5end | |||
|cluster_id=chr18:34533156..34533174,- | |||
|description=CAGE_peak_2_at_Reep5_5end | |||
|id=chr18:34533156..34533174,- | |||
|ontology_enrichment_celltype=CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0002319!7.71e-09!43;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0000540!4.14e-08!33;CL:0000047!4.14e-08!33;CL:0000031!4.14e-08!33;CL:0000404!4.14e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.09e-17,23;CL:0000337,6.09e-17,23;CL:0002319,4.15e-11,43;CL:0000221,1.25e-10,44;CL:0000133,1.25e-10,44;CL:0000540,2.56e-09,33;CL:0000047,2.56e-09,33;CL:0000031,2.56e-09,33;CL:0000404,2.56e-09,33;CL:0000393,9.16e-07,39;CL:0000211,9.16e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.04e-20!52;UBERON:0005068!8.04e-20!52;UBERON:0006241!8.04e-20!52;UBERON:0007135!8.04e-20!52;UBERON:0001017!1.94e-19!73;UBERON:0005743!1.94e-19!73;UBERON:0000073!9.75e-19!75;UBERON:0001016!9.75e-19!75;UBERON:0002346!1.70e-18!71;UBERON:0003075!1.70e-18!71;UBERON:0007284!1.70e-18!71;UBERON:0000955!1.95e-18!50;UBERON:0006238!1.95e-18!50;UBERON:0002616!7.01e-18!49;UBERON:0004121!5.23e-17!102;UBERON:0000924!5.23e-17!102;UBERON:0006601!5.23e-17!102;UBERON:0000033!1.35e-16!63;UBERON:0002020!1.73e-16!34;UBERON:0003080!2.28e-14!40;UBERON:0002780!5.61e-14!39;UBERON:0001890!5.61e-14!39;UBERON:0006240!5.61e-14!39;UBERON:0002791!2.64e-13!29;UBERON:0003528!2.64e-13!29;UBERON:0001893!2.64e-13!29;UBERON:0003056!4.57e-13!49;UBERON:0000956!7.90e-09!21;UBERON:0001869!7.90e-09!21;UBERON:0000203!7.90e-09!21;UBERON:0000025!1.01e-08!114;UBERON:0004111!1.44e-08!122;UBERON:0002619!1.72e-07!17;UBERON:0007811!9.97e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.70e-29,54;UBERON:0001049,3.57e-27,52;UBERON:0005068,3.57e-27,52;UBERON:0006241,3.57e-27,52;UBERON:0007135,3.57e-27,52;UBERON:0001017,3.32e-26,73;UBERON:0001016,5.81e-25,75;UBERON:0002020,9.39e-24,34;UBERON:0000955,1.89e-22,47;UBERON:0006238,1.89e-22,47;UBERON:0002616,1.19e-21,46;UBERON:0002346,1.50e-21,64;UBERON:0003075,1.50e-21,64;UBERON:0007284,1.50e-21,64;UBERON:0010314,2.28e-21,92;UBERON:0003080,4.79e-19,40;UBERON:0003528,5.55e-19,29;UBERON:0002791,5.55e-19,29;UBERON:0001893,5.55e-19,29;UBERON:0002780,1.81e-18,39;UBERON:0001890,1.81e-18,39;UBERON:0006240,1.81e-18,39;UBERON:0004121,1.20e-17,95;UBERON:0000924,1.20e-17,95;UBERON:0006601,1.20e-17,95;UBERON:0010371,8.93e-17,73;UBERON:0003056,9.23e-16,49;UBERON:0000956,2.73e-12,21;UBERON:0001869,2.73e-12,21;UBERON:0000203,2.73e-12,21;UBERON:0000025,5.34e-11,114;UBERON:0002619,2.72e-10,17;UBERON:0004111,3.87e-09,122;UBERON:0003076,1.11e-08,12;UBERON:0003057,1.11e-08,12;UBERON:0002420,4.35e-08,8;UBERON:0007245,4.35e-08,8;UBERON:0010009,4.35e-08,8;UBERON:0010011,4.35e-08,8;UBERON:0000454,4.35e-08,8;UBERON:0002021,6.27e-07,10;UBERON:0000411,6.27e-07,10;UBERON:0001950,6.27e-07,10;UBERON:0002240,8.81e-07,6;UBERON:0005174,8.81e-07,6;UBERON:0001137,8.81e-07,6 | |||
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| |||
|short_description=p2@Reep5 | |||
}} |
Latest revision as of 04:11, 27 September 2015
Short description: | p2@Reep5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Reep5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -87bp_to_ENSMUST00000006027, NM_007874, uc008eki.2_5end |
EntrezGene: | Reep5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.09e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.09e-17 | 23 |
neural cell | 4.15e-11 | 43 |
ectodermal cell | 1.25e-10 | 44 |
neurectodermal cell | 1.25e-10 | 44 |
neuron | 2.56e-09 | 33 |
neuronal stem cell | 2.56e-09 | 33 |
neuroblast | 2.56e-09 | 33 |
electrically signaling cell | 2.56e-09 | 33 |
electrically responsive cell | 9.16e-07 | 39 |
electrically active cell | 9.16e-07 | 39 |