FFCP PHASE1:Mm9::chr4:65266088..65266095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69807 | |EntrezGene=69807 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CH72,Q3TLR3 | |UniProt=Q8CH72,Q3TLR3 | ||
|association_with_transcript=68bp_to_ENSMUST00000050850,ENSMUST00000107366,NM_001161782,NM_053084,uc008thq.2,uc008thr.2_5end | |association_with_transcript=68bp_to_ENSMUST00000050850,ENSMUST00000107366,NM_001161782,NM_053084,uc008thq.2,uc008thr.2_5end | ||
|cluster_id=chr4:65266088..65266095,+ | |||
|description=CAGE_peak_2_at_Trim32_5end | |description=CAGE_peak_2_at_Trim32_5end | ||
|id=chr4:65266088..65266095,+ | |id=chr4:65266088..65266095,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.06e-18!23;CL:0000337!2.06e-18!23;CL:0000540!2.73e-14!33;CL:0000047!2.73e-14!33;CL:0000031!2.73e-14!33;CL:0000404!2.73e-14!33;CL:0000393!9.34e-11!39;CL:0000211!9.34e-11!39;CL:0000221!1.75e-10!44;CL:0000133!1.75e-10!44;CL:0002319!6.58e-10!43;CL:0000055!2.22e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.32e-45,23;CL:0000337,6.32e-45,23;CL:0000540,5.71e-31,33;CL:0000047,5.71e-31,33;CL:0000031,5.71e-31,33;CL:0000404,5.71e-31,33;CL:0000393,5.07e-26,39;CL:0000211,5.07e-26,39;CL:0002319,1.74e-23,43;CL:0000221,6.34e-23,44;CL:0000133,6.34e-23,44;CL:0002613,4.72e-19,3;CL:0002611,3.36e-14,2;CL:0002321,6.40e-14,70;CL:0000723,2.23e-10,91;CL:0000048,2.23e-10,91;CL:0000034,1.21e-09,97;CL:0002614,1.97e-09,3;CL:0002610,2.17e-09,3;CL:0000120,2.39e-09,3;CL:0002612,2.63e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.16e-16!75;UBERON:0001016!6.16e-16!75;UBERON:0002020!7.42e-16!34;UBERON:0001017!8.63e-16!73;UBERON:0005743!8.63e-16!73;UBERON:0001049!8.85e-16!52;UBERON:0005068!8.85e-16!52;UBERON:0006241!8.85e-16!52;UBERON:0007135!8.85e-16!52;UBERON:0002346!8.46e-14!71;UBERON:0003075!8.46e-14!71;UBERON:0007284!8.46e-14!71;UBERON:0004121!4.23e-13!102;UBERON:0000924!4.23e-13!102;UBERON:0006601!4.23e-13!102;UBERON:0002616!4.43e-12!49;UBERON:0000955!1.24e-11!50;UBERON:0006238!1.24e-11!50;UBERON:0002791!3.36e-11!29;UBERON:0003528!3.36e-11!29;UBERON:0001893!3.36e-11!29;UBERON:0000033!8.85e-11!63;UBERON:0003080!9.93e-11!40;UBERON:0003056!2.97e-10!49;UBERON:0002780!4.07e-10!39;UBERON:0001890!4.07e-10!39;UBERON:0006240!4.07e-10!39;UBERON:0002420!4.79e-09!8;UBERON:0007245!4.79e-09!8;UBERON:0010009!4.79e-09!8;UBERON:0010011!4.79e-09!8;UBERON:0000454!4.79e-09!8;UBERON:0000153!1.21e-07!94;UBERON:0002240!1.65e-07!6;UBERON:0005174!1.65e-07!6;UBERON:0001137!1.65e-07!6;UBERON:0007811!1.83e-07!86;UBERON:0001948!8.71e-07!5;UBERON:0002315!8.71e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,7.15e-21,5;UBERON:0002315,7.15e-21,5;UBERON:0002420,1.86e-19,8;UBERON:0007245,1.86e-19,8;UBERON:0010009,1.86e-19,8;UBERON:0010011,1.86e-19,8;UBERON:0000454,1.86e-19,8;UBERON:0002020,1.48e-17,34;UBERON:0002240,1.89e-17,6;UBERON:0005174,1.89e-17,6;UBERON:0001137,1.89e-17,6;UBERON:0001017,1.24e-15,73;UBERON:0000073,1.31e-15,54;UBERON:0001016,3.51e-15,75;UBERON:0002256,3.36e-14,2;UBERON:0000369,1.09e-11,5;UBERON:0002435,1.09e-11,5;UBERON:0000204,1.09e-11,5;UBERON:0010082,1.09e-11,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0001049,4.18e-11,52;UBERON:0005068,4.18e-11,52;UBERON:0006241,4.18e-11,52;UBERON:0007135,4.18e-11,52;UBERON:0002038,1.97e-09,3;UBERON:0009663,1.97e-09,3;UBERON:0009661,1.97e-09,3;UBERON:0000125,1.97e-09,3;UBERON:0002308,1.97e-09,3;UBERON:0004684,2.17e-09,3;UBERON:0002275,2.17e-09,3;UBERON:0002257,2.63e-09,3;UBERON:0003076,7.51e-09,12;UBERON:0003057,7.51e-09,12;UBERON:0002346,8.30e-09,64;UBERON:0003075,8.30e-09,64;UBERON:0007284,8.30e-09,64;UBERON:0010371,1.42e-07,73;UBERON:0003528,1.75e-07,29;UBERON:0002791,1.75e-07,29;UBERON:0001893,1.75e-07,29;UBERON:0002950,2.76e-07,4;UBERON:0001891,2.76e-07,4;UBERON:0009616,2.76e-07,4;UBERON:0010286,2.76e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,1.71390590642282,1.98781686856452,0.122490799214954,0.575072826109418,0,0,1.78762273319263,1.22885226604995,1.31886287730194,1.64677758484337,1.04182674111352,1.95428099300967,1.12552522006336,0.763991238884051,1.47314292736834,0.854230084794618,1.4911955666024,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.521472960576829,0.767146371990992,0,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0,0.583353565032143,0.129159823477731,0.168956125490778,0,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.34461281373368,0.952587382566147,0.463537303779422,0,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,1.71390590642282,1.98781686856452,0.122490799214954,0.575072826109418,0,0,1.78762273319263,1.22885226604995,1.31886287730194,1.64677758484337,1.04182674111352,1.95428099300967,1.12552522006336,0.763991238884051,1.47314292736834,0.854230084794618,1.4911955666024,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.521472960576829,0.767146371990992,0,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0,0.583353565032143,0.129159823477731,0.168956125490778,0,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.34461281373368,0.952587382566147,0.463537303779422,0,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p2@Trim32 | |short_description=p2@Trim32 | ||
}} | }} |
Latest revision as of 04:51, 27 September 2015
Short description: | p2@Trim32 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trim32_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 68bp_to_ENSMUST00000050850, ENSMUST00000107366, NM_001161782, NM_053084, uc008thq.2, uc008thr.2_5end |
EntrezGene: | Trim32 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.32e-45 | 23 |
neuroblast (sensu Vertebrata) | 6.32e-45 | 23 |
neuron | 5.71e-31 | 33 |
neuronal stem cell | 5.71e-31 | 33 |
neuroblast | 5.71e-31 | 33 |
electrically signaling cell | 5.71e-31 | 33 |
electrically responsive cell | 5.07e-26 | 39 |
electrically active cell | 5.07e-26 | 39 |
neural cell | 1.74e-23 | 43 |
ectodermal cell | 6.34e-23 | 44 |
neurectodermal cell | 6.34e-23 | 44 |
striatum neuron | 4.72e-19 | 3 |
neuron of the dorsal spinal cord | 3.36e-14 | 2 |
embryonic cell | 6.40e-14 | 70 |
somatic stem cell | 2.23e-10 | 91 |
multi fate stem cell | 2.23e-10 | 91 |
stem cell | 1.21e-09 | 97 |
neuron of the substantia nigra | 1.97e-09 | 3 |
raphe nuclei neuron | 2.17e-09 | 3 |
granule cell | 2.39e-09 | 3 |
neuron of the ventral spinal cord | 2.63e-09 | 3 |