Personal tools

FFCP PHASE1:Mm9::chr1:60099936..60100019,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr1:60099936..60100019,- |short_description=p1@Ica1l |description=CAGE_peak_1_at_Ica1l_5end |association_with_transcript=-5bp_to_ENSMUST00000027172,NM_027407,u...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:60099936..60100019,-
|DHSsupport=NA
|short_description=p1@Ica1l
|DPIdataset=NA
|description=CAGE_peak_1_at_Ica1l_5end
|association_with_transcript=-5bp_to_ENSMUST00000027172,NM_027407,uc007beb.1_5end
|EntrezGene=70375
|EntrezGene=70375
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q3TY65
|UniProt=Q3TY65
|association_with_transcript=-5bp_to_ENSMUST00000027172,NM_027407,uc007beb.1_5end
|cluster_id=chr1:60099936..60100019,-
|description=CAGE_peak_1_at_Ica1l_5end
|id=chr1:60099936..60100019,-
|ontology_enrichment_celltype=CL:0000117!3.22e-14!23;CL:0000337!3.22e-14!23;CL:0000540!2.34e-12!33;CL:0000047!2.34e-12!33;CL:0000031!2.34e-12!33;CL:0000404!2.34e-12!33;CL:0000221!7.79e-10!44;CL:0000133!7.79e-10!44;CL:0000393!1.64e-09!39;CL:0000211!1.64e-09!39;CL:0002319!1.97e-09!43;CL:0000055!4.39e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-21,23;CL:0000337,3.41e-21,23;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000393,3.99e-11,39;CL:0000211,3.99e-11,39;CL:0000221,6.73e-10,44;CL:0000133,6.73e-10,44;CL:0002319,2.35e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.71e-23!102;UBERON:0000924!3.71e-23!102;UBERON:0006601!3.71e-23!102;UBERON:0001017!5.39e-23!73;UBERON:0005743!5.39e-23!73;UBERON:0000073!8.57e-23!75;UBERON:0001016!8.57e-23!75;UBERON:0002346!1.09e-22!71;UBERON:0003075!1.09e-22!71;UBERON:0007284!1.09e-22!71;UBERON:0001049!4.74e-22!52;UBERON:0005068!4.74e-22!52;UBERON:0006241!4.74e-22!52;UBERON:0007135!4.74e-22!52;UBERON:0000033!1.56e-21!63;UBERON:0002020!1.21e-20!34;UBERON:0000955!2.28e-20!50;UBERON:0006238!2.28e-20!50;UBERON:0002616!8.19e-20!49;UBERON:0003056!2.18e-18!49;UBERON:0002791!3.19e-17!29;UBERON:0003528!3.19e-17!29;UBERON:0001893!3.19e-17!29;UBERON:0003080!9.94e-17!40;UBERON:0002780!3.95e-16!39;UBERON:0001890!3.95e-16!39;UBERON:0006240!3.95e-16!39;UBERON:0007811!4.31e-14!86;UBERON:0000153!3.46e-13!94;UBERON:0000956!2.65e-12!21;UBERON:0001869!2.65e-12!21;UBERON:0000203!2.65e-12!21;UBERON:0002619!3.01e-10!17;UBERON:0002021!2.79e-08!10;UBERON:0000411!2.79e-08!10;UBERON:0001950!2.79e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.16e-33,54;UBERON:0001049,6.19e-31,52;UBERON:0005068,6.19e-31,52;UBERON:0006241,6.19e-31,52;UBERON:0007135,6.19e-31,52;UBERON:0002020,1.69e-29,34;UBERON:0001017,1.77e-29,73;UBERON:0001016,3.31e-28,75;UBERON:0002346,4.46e-27,64;UBERON:0003075,4.46e-27,64;UBERON:0007284,4.46e-27,64;UBERON:0000955,9.67e-26,47;UBERON:0006238,9.67e-26,47;UBERON:0002616,6.51e-25,46;UBERON:0010371,3.05e-24,73;UBERON:0003528,3.19e-24,29;UBERON:0002791,3.19e-24,29;UBERON:0001893,3.19e-24,29;UBERON:0004121,1.93e-23,95;UBERON:0000924,1.93e-23,95;UBERON:0006601,1.93e-23,95;UBERON:0003080,2.21e-23,40;UBERON:0002780,1.82e-22,39;UBERON:0001890,1.82e-22,39;UBERON:0006240,1.82e-22,39;UBERON:0003056,1.17e-21,49;UBERON:0000956,1.20e-16,21;UBERON:0001869,1.20e-16,21;UBERON:0000203,1.20e-16,21;UBERON:0010314,7.60e-16,92;UBERON:0002619,1.78e-13,17;UBERON:0002021,5.54e-12,10;UBERON:0000411,5.54e-12,10;UBERON:0001950,5.54e-12,10;UBERON:0002420,1.03e-08,8;UBERON:0007245,1.03e-08,8;UBERON:0010009,1.03e-08,8;UBERON:0010011,1.03e-08,8;UBERON:0000454,1.03e-08,8;UBERON:0003076,7.12e-08,12;UBERON:0003057,7.12e-08,12;UBERON:0002240,3.99e-07,6;UBERON:0005174,3.99e-07,6;UBERON:0001137,3.99e-07,6
|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0.439372365468944,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,13.1505699558739,10.0508286061686,9.50747105259269,0,0,0,0,0,0,0,4.97710139080693,5.53524347159932,7.78202357000113,13.7112472513826,7.95126747425809,6.49201235839256,4.50473713785711,6.43453150627015,3.30347642998166,12.896421146604,9.83081812839958,12.1335384711778,11.8933936683133,14.0646610050325,9.49222196604695,10.1297269805702,11.9182633265912,17.6777151284201,18.6506901846825,16.9623495701024,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,3.52108549441701,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0,0.691846491768175,0.904335843315735,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,5.5628351432194,7.74952815209784,0,0,0,0,10.7849260371472,7.32000964509802,19.2251158732683,14.6012428961512,25.3158302757027,9.3504620051802,15.7374025175725,0.509196819251581,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.90422890701429,2.10913147369116,2.8185018462667,1.78033276663485,1.29351685369508,0,0.756424320671277,0.351902248327898,0,1.39023624612799,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,17.8746456279508,11.1136981369627,0,0,0.213288250535234,0,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.610953983535943,0,0.210407459670956,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0.221464689648775,0.637819074629948,0,0.172684981865896,0,0,0,0,0,6.26147300952389,7.97039468826982,0,0,0.631016438832513,0,0.646270193198397,0,0,0.849229592366497,0.809621403349789,1.16902343164525,0.790575555893047,7.06906896127976,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,3.06395645178409,0,0,0,0.354680467284547,1.07021290561242,1.48094118541909,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.542816324353403,0.596861720015682,0.984845398470368,0,7.04616147639937,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,0,55.2419079910507,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.704143431874524,0.13020438484395,0.209718688851422,21.9841549951666,36.5798107947489,0.948033361884535,0,0,0,0.179026695667481,0,0.600977247599844,0.443068581523732,0.504832249740738,0.914481679859998,0.403304740547362,0.292373642219257,0.192423683280659,1.16876902181569,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,18.6368108063632,14.7304075682297,20.6242384838183,24.4031518928036,23.9778881919725,17.3740596399631,15.5255175053315,18.0128481289688,17.2194115413998,10.8729665467882,0.103787347584177,0.798049746802062,1.02440163452481,1.45864030240976,1.46729213839588,2.38996560985018,2.00022055021454,1.85431551515005,0.962757628775446,1.51618327058278,1.2673964994512,2.45214243801899,2.06011316433741,1.98477972455095,2.35485422718014,0.952587382566147,3.01299247456624,1.54327376370964,1.64834360321323,2.06078488188156,1.37147700954166,1.77475806159337,1.43061713968393,2.32554266611726,1.97629698872194,2.19997980518359,1.82927972872773,1.57841826862706,1.62964936615034,1.68342681497322,2.01679530811096,2.26560309463796,1.63692417267876,2.78886314134739,1.92906610981141,3.99696924700713,1.63752125911786,1.50409737833809,0.765153328275374,0.882365676478062,0.695603506861264
|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0.439372365468944,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,13.1505699558739,10.0508286061686,9.50747105259269,0,0,0,0,0,0,0,4.97710139080693,5.53524347159932,7.78202357000113,13.7112472513826,7.95126747425809,6.49201235839256,4.50473713785711,6.43453150627015,3.30347642998166,12.896421146604,9.83081812839958,12.1335384711778,11.8933936683133,14.0646610050325,9.49222196604695,10.1297269805702,11.9182633265912,17.6777151284201,18.6506901846825,16.9623495701024,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,3.52108549441701,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0,0.691846491768175,0.904335843315735,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,5.5628351432194,7.74952815209784,0,0,0,0,10.7849260371472,7.32000964509802,19.2251158732683,14.6012428961512,25.3158302757027,9.3504620051802,15.7374025175725,0.509196819251581,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.90422890701429,2.10913147369116,2.8185018462667,1.78033276663485,1.29351685369508,0,0.756424320671277,0.351902248327898,0,1.39023624612799,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,17.8746456279508,11.1136981369627,0,0,0.213288250535234,0,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.610953983535943,0,0.210407459670956,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0.221464689648775,0.637819074629948,0,0.172684981865896,0,0,0,0,0,6.26147300952389,7.97039468826982,0,0,0.631016438832513,0,0.646270193198397,0,0,0.849229592366497,0.809621403349789,1.16902343164525,0.790575555893047,7.06906896127976,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,3.06395645178409,0,0,0,0.354680467284547,1.07021290561242,1.48094118541909,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.542816324353403,0.596861720015682,0.984845398470368,0,7.04616147639937,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,0,55.2419079910507,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.704143431874524,0.13020438484395,0.209718688851422,21.9841549951666,36.5798107947489,0.948033361884535,0,0,0,0.179026695667481,0,0.600977247599844,0.443068581523732,0.504832249740738,0.914481679859998,0.403304740547362,0.292373642219257,0.192423683280659,1.16876902181569,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,18.6368108063632,14.7304075682297,20.6242384838183,24.4031518928036,23.9778881919725,17.3740596399631,15.5255175053315,18.0128481289688,17.2194115413998,10.8729665467882,0.103787347584177,0.798049746802062,1.02440163452481,1.45864030240976,1.46729213839588,2.38996560985018,2.00022055021454,1.85431551515005,0.962757628775446,1.51618327058278,1.2673964994512,2.45214243801899,2.06011316433741,1.98477972455095,2.35485422718014,0.952587382566147,3.01299247456624,1.54327376370964,1.64834360321323,2.06078488188156,1.37147700954166,1.77475806159337,1.43061713968393,2.32554266611726,1.97629698872194,2.19997980518359,1.82927972872773,1.57841826862706,1.62964936615034,1.68342681497322,2.01679530811096,2.26560309463796,1.63692417267876,2.78886314134739,1.92906610981141,3.99696924700713,1.63752125911786,1.50409737833809,0.765153328275374,0.882365676478062,0.695603506861264
|short_description=p1@Ica1l
}}
}}

Latest revision as of 06:50, 27 September 2015

Short description:p1@Ica1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ica1l_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -5bp_to_ENSMUST00000027172, NM_027407, uc007beb.1_5end
EntrezGene:Ica1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ica1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F119.23
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F225.32
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B215.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E817.87
hippocampus, neonate N00.CNhs11228.627-43G111.11
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G555.24
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H321.98
testis, neonate N30.CNhs11130.1391-42E236.58
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.41e-2123
neuroblast (sensu Vertebrata)3.41e-2123
neuron1.16e-1433
neuronal stem cell1.16e-1433
neuroblast1.16e-1433
electrically signaling cell1.16e-1433
electrically responsive cell3.99e-1139
electrically active cell3.99e-1139
ectodermal cell6.73e-1044
neurectodermal cell6.73e-1044
neural cell2.35e-0943

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.16e-3354
neural tube6.19e-3152
neural rod6.19e-3152
future spinal cord6.19e-3152
neural keel6.19e-3152
gray matter1.69e-2934
central nervous system1.77e-2973
nervous system3.31e-2875
neurectoderm4.46e-2764
neural plate4.46e-2764
presumptive neural plate4.46e-2764
brain9.67e-2647
future brain9.67e-2647
regional part of brain6.51e-2546
ecto-epithelium3.05e-2473
brain grey matter3.19e-2429
regional part of telencephalon3.19e-2429
telencephalon3.19e-2429
ectoderm-derived structure1.93e-2395
ectoderm1.93e-2395
presumptive ectoderm1.93e-2395
anterior neural tube2.21e-2340
regional part of forebrain1.82e-2239
forebrain1.82e-2239
future forebrain1.82e-2239
pre-chordal neural plate1.17e-2149
cerebral cortex1.20e-1621
cerebral hemisphere1.20e-1621
pallium1.20e-1621
structure with developmental contribution from neural crest7.60e-1692
regional part of cerebral cortex1.78e-1317
occipital lobe5.54e-1210
visual cortex5.54e-1210
neocortex5.54e-1210
basal ganglion1.03e-088
nuclear complex of neuraxis1.03e-088
aggregate regional part of brain1.03e-088
collection of basal ganglia1.03e-088
cerebral subcortex1.03e-088
posterior neural tube7.12e-0812
chordal neural plate7.12e-0812
spinal cord3.99e-076
dorsal region element3.99e-076
dorsum3.99e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:60099936..60100019,-&oldid=4297930"