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FFCP PHASE1:Mm9::chr13:41174997..41175031,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17152
|EntrezGene=17152
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=E9QAU5,E9Q4B2,Q8CDL5
|UniProt=E9QAU5,E9Q4B2,Q8CDL5
|association_with_transcript=43bp_to_ENSMUST00000070193,ENSMUST00000165087,NM_001145802,NM_001145803,uc007qew.2,uc007qex.2_5end
|association_with_transcript=43bp_to_ENSMUST00000070193,ENSMUST00000165087,NM_001145802,NM_001145803,uc007qew.2,uc007qex.2_5end
|cluster_id=chr13:41174997..41175031,-
|description=CAGE_peak_1_at_Mak_5end
|description=CAGE_peak_1_at_Mak_5end
|id=chr13:41174997..41175031,-
|id=chr13:41174997..41175031,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.61e-15!63;UBERON:0003056!1.88e-15!49;UBERON:0001017!2.81e-11!73;UBERON:0005743!2.81e-11!73;UBERON:0000955!3.64e-11!50;UBERON:0006238!3.64e-11!50;UBERON:0001049!5.91e-11!52;UBERON:0005068!5.91e-11!52;UBERON:0006241!5.91e-11!52;UBERON:0007135!5.91e-11!52;UBERON:0003080!7.10e-11!40;UBERON:0002616!7.29e-11!49;UBERON:0002346!8.17e-11!71;UBERON:0003075!8.17e-11!71;UBERON:0007284!8.17e-11!71;UBERON:0002780!1.01e-10!39;UBERON:0001890!1.01e-10!39;UBERON:0006240!1.01e-10!39;UBERON:0000073!1.28e-10!75;UBERON:0001016!1.28e-10!75;UBERON:0004121!2.06e-09!102;UBERON:0000924!2.06e-09!102;UBERON:0006601!2.06e-09!102;UBERON:0002020!4.30e-08!34;UBERON:0002791!1.78e-07!29;UBERON:0003528!1.78e-07!29;UBERON:0001893!1.78e-07!29;UBERON:0002048!3.72e-07!14;UBERON:0000117!3.72e-07!14;UBERON:0000171!3.72e-07!14;UBERON:0000170!3.72e-07!14;UBERON:0005597!3.72e-07!14;UBERON:0000118!3.72e-07!14;UBERON:0005178!5.62e-07!17;UBERON:0005181!5.62e-07!17;UBERON:0002224!5.62e-07!17;UBERON:0000915!5.62e-07!17;UBERON:0008947!5.62e-07!17;UBERON:0003258!5.62e-07!17;UBERON:0007811!5.74e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.17e-14,49;UBERON:0002021,8.65e-11,10;UBERON:0000411,8.65e-11,10;UBERON:0001950,8.65e-11,10;UBERON:0002346,2.63e-10,64;UBERON:0003075,2.63e-10,64;UBERON:0007284,2.63e-10,64;UBERON:0002048,2.97e-09,14;UBERON:0000117,2.97e-09,14;UBERON:0000171,2.97e-09,14;UBERON:0000170,2.97e-09,14;UBERON:0005597,2.97e-09,14;UBERON:0000118,2.97e-09,14;UBERON:0002780,3.53e-09,39;UBERON:0001890,3.53e-09,39;UBERON:0006240,3.53e-09,39;UBERON:0004121,4.21e-09,95;UBERON:0000924,4.21e-09,95;UBERON:0006601,4.21e-09,95;UBERON:0003080,8.43e-09,40;UBERON:0010371,8.83e-09,73;UBERON:0005178,2.97e-08,17;UBERON:0005181,2.97e-08,17;UBERON:0002224,2.97e-08,17;UBERON:0000915,2.97e-08,17;UBERON:0008947,2.97e-08,17;UBERON:0003258,2.97e-08,17;UBERON:0001017,6.81e-08,73;UBERON:0001016,1.81e-07,75;UBERON:0000073,3.11e-07,54;UBERON:0000970,3.50e-07,9;UBERON:0000019,3.50e-07,9;UBERON:0000047,3.50e-07,9;UBERON:0010312,3.50e-07,9;UBERON:0004088,3.50e-07,9;UBERON:0002104,3.50e-07,9;UBERON:0001456,3.50e-07,9;UBERON:0003072,3.50e-07,9;UBERON:0004128,3.50e-07,9;UBERON:0003071,3.50e-07,9;UBERON:0005153,4.13e-07,17;UBERON:0002616,6.64e-07,46;UBERON:0001049,8.03e-07,52;UBERON:0005068,8.03e-07,52;UBERON:0006241,8.03e-07,52;UBERON:0007135,8.03e-07,52
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,45.7532901012755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,3.07374644257244,0,0.135005938331691,0,0.285650984403804,0.662605622854841,0.244981598429908,0.287536413054709,0.919218786610021,4.40463523997555,0.383062014255563,1.99688493233117,0.791317726381163,1.09785172322892,1.56274011167028,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,1.13897344639282,0.372798891650601,0.075726193333184,0,2.31891590961342,0.860423876981386,0,0,0,0,5.33688796500657,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,6.39429726426736,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0.292780797011547,0.83778682725382,0.255457055208591,0,0,0,0.599162557619291,4.57500602818627,1.63350657746724,2.43354048269187,2.04572365864264,2.0778804455956,1.46017136760982,0.203678727700633,0.248813941220186,1.0108910337347,26.0947901299228,0.390361328888111,0.919608417733892,1.26043490863744,4.21973489940002,8.300452896462,18.7046031615881,19.4899587084236,38.8055056108524,1.29340795759705,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,1.05144974282064,0.308713837137853,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,0,1.4255592949172,0.193952487167626,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,10.1614254591633,0.189491411770485,0.651859905768103,0.509235257325564,1.17345124144251,2.34508760418542,4.28478553594825,4.09780660501378,2.83743259391144,3.10050565508285,2.07291199254733,2.13022309130459,3.62638461918381,4.48412081602686,4.52373851817817,0,0,0,0.481651769963376,0.234423373184406,0,0,0.631016438832513,0,0,0.238968797952552,0,0,0,0,0,0.963963949265421,5.39372323791421,0.35613120733451,0.651547837414304,9.89820737835213,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,3.06395645178409,0.720244376125241,0.646793418913773,0.428674070063185,3.54680467284547,1.78368817602071,3.29098041204242,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0.164140899745061,0,1.66882771809459,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0.474503990371703,0.609958401380546,0.108005340821801,0.209088296014469,0.655087691238533,0,0,0,0,0,313.41327390841,0.448549638131936,0.165458490457098,0.972255941720238,0.774958940866387,0.337912250981556,0.938857909166032,0.13020438484395,0.734015410979976,56.2891001524594,156.400293398021,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0.233753804363138,0.226730383615211,0.665957860122194,1.16628013592318,0.503653849092235,0.19318959403219,0.563047426353546,2.56412273974171,0,0,2.25900737046827,2.76195141904306,1.71868654031819,1.3748254587495,2.74033007908257,2.2661816921691,4.05013500139084,3.60256962579376,4.07828168085784,1.55328093525546,0.207574695168353,0.798049746802062,0.853668028770671,0.243106717068294,0.209613162627982,0.735374033800057,1.33348036680969,2.06035057238894,0.962757628775446,0.252697211763798,1.2673964994512,1.69763707247469,0.655490552289177,0.576226371643824,0.574354689556133,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,1.17759136107518,0.685738504770831,0.887379030796687,0.953744759789284,1.59881058295561,0.376437521661322,1.09998990259179,0.365855945745545,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.394017929502254,0.409231043169689,0.77468420592983,1.15743966588685,0,0.467863216890817,1.07435527024149,0.191288332068843,0,0.231867835620421
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,45.7532901012755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,3.07374644257244,0,0.135005938331691,0,0.285650984403804,0.662605622854841,0.244981598429908,0.287536413054709,0.919218786610021,4.40463523997555,0.383062014255563,1.99688493233117,0.791317726381163,1.09785172322892,1.56274011167028,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,1.13897344639282,0.372798891650601,0.075726193333184,0,2.31891590961342,0.860423876981386,0,0,0,0,5.33688796500657,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,6.39429726426736,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0.292780797011547,0.83778682725382,0.255457055208591,0,0,0,0.599162557619291,4.57500602818627,1.63350657746724,2.43354048269187,2.04572365864264,2.0778804455956,1.46017136760982,0.203678727700633,0.248813941220186,1.0108910337347,26.0947901299228,0.390361328888111,0.919608417733892,1.26043490863744,4.21973489940002,8.300452896462,18.7046031615881,19.4899587084236,38.8055056108524,1.29340795759705,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,1.05144974282064,0.308713837137853,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,0,1.4255592949172,0.193952487167626,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,10.1614254591633,0.189491411770485,0.651859905768103,0.509235257325564,1.17345124144251,2.34508760418542,4.28478553594825,4.09780660501378,2.83743259391144,3.10050565508285,2.07291199254733,2.13022309130459,3.62638461918381,4.48412081602686,4.52373851817817,0,0,0,0.481651769963376,0.234423373184406,0,0,0.631016438832513,0,0,0.238968797952552,0,0,0,0,0,0.963963949265421,5.39372323791421,0.35613120733451,0.651547837414304,9.89820737835213,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,3.06395645178409,0.720244376125241,0.646793418913773,0.428674070063185,3.54680467284547,1.78368817602071,3.29098041204242,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0.164140899745061,0,1.66882771809459,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0.474503990371703,0.609958401380546,0.108005340821801,0.209088296014469,0.655087691238533,0,0,0,0,0,313.41327390841,0.448549638131936,0.165458490457098,0.972255941720238,0.774958940866387,0.337912250981556,0.938857909166032,0.13020438484395,0.734015410979976,56.2891001524594,156.400293398021,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0.233753804363138,0.226730383615211,0.665957860122194,1.16628013592318,0.503653849092235,0.19318959403219,0.563047426353546,2.56412273974171,0,0,2.25900737046827,2.76195141904306,1.71868654031819,1.3748254587495,2.74033007908257,2.2661816921691,4.05013500139084,3.60256962579376,4.07828168085784,1.55328093525546,0.207574695168353,0.798049746802062,0.853668028770671,0.243106717068294,0.209613162627982,0.735374033800057,1.33348036680969,2.06035057238894,0.962757628775446,0.252697211763798,1.2673964994512,1.69763707247469,0.655490552289177,0.576226371643824,0.574354689556133,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,1.17759136107518,0.685738504770831,0.887379030796687,0.953744759789284,1.59881058295561,0.376437521661322,1.09998990259179,0.365855945745545,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.394017929502254,0.409231043169689,0.77468420592983,1.15743966588685,0,0.467863216890817,1.07435527024149,0.191288332068843,0,0.231867835620421
|short_description=p1@Mak
|short_description=p1@Mak
}}
}}

Latest revision as of 14:28, 1 October 2015

Short description:p1@Mak
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mak_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 43bp_to_ENSMUST00000070193, ENSMUST00000165087, NM_001145802, NM_001145803, uc007qew.2, uc007qex.2_5end
EntrezGene:Mak
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mak

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.39
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G426.09
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C68.30
eyeball, neonate N01.CNhs11140.1532-43E718.70
eyeball, neonate N02.CNhs11205.1551-44G819.49
eyeball, neonate N16.CNhs11188.777-19A238.81
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B110.16
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5313.41
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H356.29
testis, neonate N30.CNhs11130.1391-42E2156.40
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate6.17e-1449
occipital lobe8.65e-1110
visual cortex8.65e-1110
neocortex8.65e-1110
neurectoderm2.63e-1064
neural plate2.63e-1064
presumptive neural plate2.63e-1064
lung2.97e-0914
respiratory tube2.97e-0914
respiration organ2.97e-0914
pair of lungs2.97e-0914
lung primordium2.97e-0914
lung bud2.97e-0914
regional part of forebrain3.53e-0939
forebrain3.53e-0939
future forebrain3.53e-0939
ectoderm-derived structure4.21e-0995
ectoderm4.21e-0995
presumptive ectoderm4.21e-0995
anterior neural tube8.43e-0940
ecto-epithelium8.83e-0973
thoracic cavity element2.97e-0817
thoracic segment organ2.97e-0817
thoracic cavity2.97e-0817
thoracic segment of trunk2.97e-0817
respiratory primordium2.97e-0817
endoderm of foregut2.97e-0817
central nervous system6.81e-0873
nervous system1.81e-0775
regional part of nervous system3.11e-0754
eye3.50e-079
camera-type eye3.50e-079
simple eye3.50e-079
immature eye3.50e-079
ocular region3.50e-079
visual system3.50e-079
face3.50e-079
optic cup3.50e-079
optic vesicle3.50e-079
eye primordium3.50e-079
epithelial bud4.13e-0717
regional part of brain6.64e-0746
neural tube8.03e-0752
neural rod8.03e-0752
future spinal cord8.03e-0752
neural keel8.03e-0752
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