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FFCP PHASE1:Mm9::chr6:58781545..58781560,+: Difference between revisions

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{{FFCP|EntrezGene=73998|HGNC=|MCL_coexpression_id=2|UniProt=D3Z2S3|association_with_transcript=48bp_to_ENSMUST00000122981_5end|description=CAGE_peak_4_at_Herc3_5end|id=chr6:58781545..58781560,+|ontology_enrichment_celltype=CL:0000117!1.58e-09!23;CL:0000337!1.58e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-12,23;CL:0000337,2.61e-12,23;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0000791,9.76e-07,9;CL:0000789,9.76e-07,9;CL:0002420,9.76e-07,9;CL:0002419,9.76e-07,9;CL:0000790,9.76e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.14e-21!50;UBERON:0006238!5.14e-21!50;UBERON:0001049!9.46e-21!52;UBERON:0005068!9.46e-21!52;UBERON:0006241!9.46e-21!52;UBERON:0007135!9.46e-21!52;UBERON:0002616!1.84e-20!49;UBERON:0000073!6.39e-18!75;UBERON:0001016!6.39e-18!75;UBERON:0001017!1.02e-17!73;UBERON:0005743!1.02e-17!73;UBERON:0002020!2.32e-17!34;UBERON:0000033!2.70e-16!63;UBERON:0002791!6.18e-16!29;UBERON:0003528!6.18e-16!29;UBERON:0001893!6.18e-16!29;UBERON:0002780!1.03e-15!39;UBERON:0001890!1.03e-15!39;UBERON:0006240!1.03e-15!39;UBERON:0003080!1.23e-15!40;UBERON:0002346!1.73e-14!71;UBERON:0003075!1.73e-14!71;UBERON:0007284!1.73e-14!71;UBERON:0007811!4.68e-14!86;UBERON:0003056!2.73e-13!49;UBERON:0000956!9.48e-13!21;UBERON:0001869!9.48e-13!21;UBERON:0000203!9.48e-13!21;UBERON:0000153!6.21e-12!94;UBERON:0004121!9.38e-11!102;UBERON:0000924!9.38e-11!102;UBERON:0006601!9.38e-11!102;UBERON:0002619!3.20e-10!17;UBERON:0002021!1.28e-08!10;UBERON:0000411!1.28e-08!10;UBERON:0001950!1.28e-08!10;UBERON:0000064!4.92e-08!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.44e-32,54;UBERON:0001049,8.69e-29,52;UBERON:0005068,8.69e-29,52;UBERON:0006241,8.69e-29,52;UBERON:0007135,8.69e-29,52;UBERON:0001017,1.13e-27,73;UBERON:0001016,1.09e-26,75;UBERON:0000955,2.86e-26,47;UBERON:0006238,2.86e-26,47;UBERON:0002020,8.86e-26,34;UBERON:0002616,4.95e-25,46;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0002346,7.55e-22,64;UBERON:0003075,7.55e-22,64;UBERON:0007284,7.55e-22,64;UBERON:0002780,1.08e-21,39;UBERON:0001890,1.08e-21,39;UBERON:0006240,1.08e-21,39;UBERON:0003080,5.43e-21,40;UBERON:0002021,1.19e-20,10;UBERON:0000411,1.19e-20,10;UBERON:0001950,1.19e-20,10;UBERON:0000956,1.22e-19,21;UBERON:0001869,1.22e-19,21;UBERON:0000203,1.22e-19,21;UBERON:0004121,4.09e-19,95;UBERON:0000924,4.09e-19,95;UBERON:0006601,4.09e-19,95;UBERON:0010371,3.77e-18,73;UBERON:0003056,5.63e-16,49;UBERON:0010314,8.80e-14,92;UBERON:0002619,1.71e-13,17;UBERON:0000025,1.43e-09,114;UBERON:0004111,1.98e-08,122;UBERON:0003076,3.30e-08,12;UBERON:0003057,3.30e-08,12;UBERON:0011216,1.00e-07,194|phase1_expression=0,0,0.454999239389536,0.60492842261366,1.00179145989269,0.671517087647559,0.233612640595526,1.42035655785734,3.23814060948833,2.57470978954193,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0.42438965179803,0.765389611359628,0,0,0.799962113967033,0.45881856213434,0,0.86152399231815,0.215471232685889,0.190023419456374,0,0,0,0,15.8481681015439,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.419959264876088,0,1.17447824240415,2.17608642603403,2.01656279485478,0,0,0,1.01158230429799,0,1.90149421051854,0,0,0.449949858640699,0,0,0,0.384218305321555,2.07379224616955,3.78016627328734,2.3135745748652,1.99955689082663,1.32521124570968,0.857435594504678,0.862609239164127,0.919218786610021,2.20231761998777,2.68143409978894,1.53606533256243,0.395658863190582,0.640413505216868,0.52091337055676,2.23346399201105,1.12552522006336,2.90316670775939,0.294628585473668,1.56608848879013,0.372798891650601,0.908714319998209,0.151143120213571,0.579728977403356,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.578397427679647,0,0.161766849947409,0,0,0,2.34224637609238,1.46612694769419,0.510914110417183,0.11981512450592,0,0.254140454146129,0.299581278809645,1.83000241127451,1.38219787324151,4.69325664519146,6.39288643325826,2.28566849015516,1.46017136760982,0.203678727700633,0,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0,0.136072998302656,0.384341160854549,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0,0.414251545071004,0,0.720248245844059,1.18372367792605,0.787056926989615,0.308534225774757,0.930135779001631,0.536546802799238,0.467061369468678,0.658239399653922,0,0.729619285912702,0.438599962275997,0.439100230582101,0.268412837520744,4.83666881697493,0.514523061896422,0,0,0,0,0.128867461322093,1.00841762311671,0.22237804384487,0.190225626112559,0,0.32939790944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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=73998
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=D3Z2S3
|association_with_transcript=48bp_to_ENSMUST00000122981_5end
|cluster_id=chr6:58781545..58781560,+
|description=CAGE_peak_4_at_Herc3_5end
|id=chr6:58781545..58781560,+
|ontology_enrichment_celltype=CL:0000117!1.58e-09!23;CL:0000337!1.58e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-12,23;CL:0000337,2.61e-12,23;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0000791,9.76e-07,9;CL:0000789,9.76e-07,9;CL:0002420,9.76e-07,9;CL:0002419,9.76e-07,9;CL:0000790,9.76e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!5.14e-21!50;UBERON:0006238!5.14e-21!50;UBERON:0001049!9.46e-21!52;UBERON:0005068!9.46e-21!52;UBERON:0006241!9.46e-21!52;UBERON:0007135!9.46e-21!52;UBERON:0002616!1.84e-20!49;UBERON:0000073!6.39e-18!75;UBERON:0001016!6.39e-18!75;UBERON:0001017!1.02e-17!73;UBERON:0005743!1.02e-17!73;UBERON:0002020!2.32e-17!34;UBERON:0000033!2.70e-16!63;UBERON:0002791!6.18e-16!29;UBERON:0003528!6.18e-16!29;UBERON:0001893!6.18e-16!29;UBERON:0002780!1.03e-15!39;UBERON:0001890!1.03e-15!39;UBERON:0006240!1.03e-15!39;UBERON:0003080!1.23e-15!40;UBERON:0002346!1.73e-14!71;UBERON:0003075!1.73e-14!71;UBERON:0007284!1.73e-14!71;UBERON:0007811!4.68e-14!86;UBERON:0003056!2.73e-13!49;UBERON:0000956!9.48e-13!21;UBERON:0001869!9.48e-13!21;UBERON:0000203!9.48e-13!21;UBERON:0000153!6.21e-12!94;UBERON:0004121!9.38e-11!102;UBERON:0000924!9.38e-11!102;UBERON:0006601!9.38e-11!102;UBERON:0002619!3.20e-10!17;UBERON:0002021!1.28e-08!10;UBERON:0000411!1.28e-08!10;UBERON:0001950!1.28e-08!10;UBERON:0000064!4.92e-08!99
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.44e-32,54;UBERON:0001049,8.69e-29,52;UBERON:0005068,8.69e-29,52;UBERON:0006241,8.69e-29,52;UBERON:0007135,8.69e-29,52;UBERON:0001017,1.13e-27,73;UBERON:0001016,1.09e-26,75;UBERON:0000955,2.86e-26,47;UBERON:0006238,2.86e-26,47;UBERON:0002020,8.86e-26,34;UBERON:0002616,4.95e-25,46;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0002346,7.55e-22,64;UBERON:0003075,7.55e-22,64;UBERON:0007284,7.55e-22,64;UBERON:0002780,1.08e-21,39;UBERON:0001890,1.08e-21,39;UBERON:0006240,1.08e-21,39;UBERON:0003080,5.43e-21,40;UBERON:0002021,1.19e-20,10;UBERON:0000411,1.19e-20,10;UBERON:0001950,1.19e-20,10;UBERON:0000956,1.22e-19,21;UBERON:0001869,1.22e-19,21;UBERON:0000203,1.22e-19,21;UBERON:0004121,4.09e-19,95;UBERON:0000924,4.09e-19,95;UBERON:0006601,4.09e-19,95;UBERON:0010371,3.77e-18,73;UBERON:0003056,5.63e-16,49;UBERON:0010314,8.80e-14,92;UBERON:0002619,1.71e-13,17;UBERON:0000025,1.43e-09,114;UBERON:0004111,1.98e-08,122;UBERON:0003076,3.30e-08,12;UBERON:0003057,3.30e-08,12;UBERON:0011216,1.00e-07,194
|phase1_expression=0,0,0.454999239389536,0.60492842261366,1.00179145989269,0.671517087647559,0.233612640595526,1.42035655785734,3.23814060948833,2.57470978954193,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0.42438965179803,0.765389611359628,0,0,0.799962113967033,0.45881856213434,0,0.86152399231815,0.215471232685889,0.190023419456374,0,0,0,0,15.8481681015439,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.419959264876088,0,1.17447824240415,2.17608642603403,2.01656279485478,0,0,0,1.01158230429799,0,1.90149421051854,0,0,0.449949858640699,0,0,0,0.384218305321555,2.07379224616955,3.78016627328734,2.3135745748652,1.99955689082663,1.32521124570968,0.857435594504678,0.862609239164127,0.919218786610021,2.20231761998777,2.68143409978894,1.53606533256243,0.395658863190582,0.640413505216868,0.52091337055676,2.23346399201105,1.12552522006336,2.90316670775939,0.294628585473668,1.56608848879013,0.372798891650601,0.908714319998209,0.151143120213571,0.579728977403356,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.578397427679647,0,0.161766849947409,0,0,0,2.34224637609238,1.46612694769419,0.510914110417183,0.11981512450592,0,0.254140454146129,0.299581278809645,1.83000241127451,1.38219787324151,4.69325664519146,6.39288643325826,2.28566849015516,1.46017136760982,0.203678727700633,0,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0,0.136072998302656,0.384341160854549,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0,0.414251545071004,0,0.720248245844059,1.18372367792605,0.787056926989615,0.308534225774757,0.930135779001631,0.536546802799238,0.467061369468678,0.658239399653922,0,0.729619285912702,0.438599962275997,0.439100230582101,0.268412837520744,4.83666881697493,0.514523061896422,0,0,0,0,0.128867461322093,1.00841762311671,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.252946148497029,0.442830443938806,0,0.616985819609003,0,0.166845105716094,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,2.40825884981688,1.75817529888305,0,0.252470927204373,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0,0,0.790575555893047,1.28528526568723,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,0,0,0.214337035031592,0.532020700926821,0.535106452806212,0.493647061806363,0.304464949114599,0.469343416127421,0,0,0.16488625294148,0,0.301564624640779,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0,0.185194527369712,0,0,0.228778173206523,0.679913719975421,0.69975726161829,0.552799895217695,0.954670618015114,0.316335993581135,0,0.216010681643603,0,0,0,0.247960367176008,0.785267825952089,0.259229946583586,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0,0.117357238645754,0,0.419437377702843,0,0,0,0,0.205421914329655,0,0.179026695667481,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.100826185136841,0.487289403698762,0.0962118416403295,0.467507608726276,0,0.221985953374065,0.448569283047378,0,0,0.187682475451182,0,0,0,13.5540442228096,12.4287813856938,12.0308057822273,17.8727309637435,11.6464028361009,15.8632718451837,13.5004500046361,10.8077088773813,10.8754178156209,10.3552062350364,0,0,0,0.243106717068294,0,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,0.842773567228942,0.576226371643824,0.402048282689293,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0.685738504770831,0.532427418478012,0.715308569841963,0,0.941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0,0,0.237270036248348,0.29551344712669,0,0.619747364743864,0.192906610981141,0.499621155875892,0,0.429742108096597,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p4@Herc3
}}

Latest revision as of 14:50, 1 October 2015

Short description:p4@Herc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Herc3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 48bp_to_ENSMUST00000122981_5end
EntrezGene:Herc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Herc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.44e-3254
neural tube8.69e-2952
neural rod8.69e-2952
future spinal cord8.69e-2952
neural keel8.69e-2952
central nervous system1.13e-2773
nervous system1.09e-2675
brain2.86e-2647
future brain2.86e-2647
gray matter8.86e-2634
regional part of brain4.95e-2546
brain grey matter1.41e-2329
regional part of telencephalon1.41e-2329
telencephalon1.41e-2329
neurectoderm7.55e-2264
neural plate7.55e-2264
presumptive neural plate7.55e-2264
regional part of forebrain1.08e-2139
forebrain1.08e-2139
future forebrain1.08e-2139
anterior neural tube5.43e-2140
occipital lobe1.19e-2010
visual cortex1.19e-2010
neocortex1.19e-2010
cerebral cortex1.22e-1921
cerebral hemisphere1.22e-1921
pallium1.22e-1921
ectoderm-derived structure4.09e-1995
ectoderm4.09e-1995
presumptive ectoderm4.09e-1995
ecto-epithelium3.77e-1873
pre-chordal neural plate5.63e-1649
structure with developmental contribution from neural crest8.80e-1492
regional part of cerebral cortex1.71e-1317
tube1.43e-09114
anatomical conduit1.98e-08122
posterior neural tube3.30e-0812
chordal neural plate3.30e-0812
organ system subdivision1.00e-07194
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