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FFCP PHASE1:Mm9::chr6:8728213..8728230,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:8728213..8728230,-
|DHSsupport=NA
|short_description=p4@Ica1
|DPIdataset=NA
|description=CAGE_peak_4_at_Ica1_5end
|association_with_transcript=-59bp_to_ENSMUST00000115519,ENSMUST00000153390_5end
|EntrezGene=15893
|EntrezGene=15893
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=D3Z118,D3Z376
|UniProt=D3Z118,D3Z376
|association_with_transcript=-59bp_to_ENSMUST00000115519,ENSMUST00000153390_5end
|cluster_id=chr6:8728213..8728230,-
|description=CAGE_peak_4_at_Ica1_5end
|id=chr6:8728213..8728230,-
|ontology_enrichment_celltype=CL:0000117!1.78e-08!23;CL:0000337!1.78e-08!23;CL:0000540!5.62e-07!33;CL:0000047!5.62e-07!33;CL:0000031!5.62e-07!33;CL:0000404!5.62e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-10,23;CL:0000337,3.43e-10,23;CL:0000540,1.51e-07,33;CL:0000047,1.51e-07,33;CL:0000031,1.51e-07,33;CL:0000404,1.51e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.29e-14!52;UBERON:0005068!2.29e-14!52;UBERON:0006241!2.29e-14!52;UBERON:0007135!2.29e-14!52;UBERON:0002020!8.02e-13!34;UBERON:0001017!3.30e-12!73;UBERON:0005743!3.30e-12!73;UBERON:0002346!5.69e-12!71;UBERON:0003075!5.69e-12!71;UBERON:0007284!5.69e-12!71;UBERON:0000955!1.21e-11!50;UBERON:0006238!1.21e-11!50;UBERON:0002616!2.77e-11!49;UBERON:0000073!3.21e-11!75;UBERON:0001016!3.21e-11!75;UBERON:0000033!3.50e-11!63;UBERON:0003080!1.41e-10!40;UBERON:0002780!4.54e-10!39;UBERON:0001890!4.54e-10!39;UBERON:0006240!4.54e-10!39;UBERON:0002791!7.14e-10!29;UBERON:0003528!7.14e-10!29;UBERON:0001893!7.14e-10!29;UBERON:0004121!2.82e-09!102;UBERON:0000924!2.82e-09!102;UBERON:0006601!2.82e-09!102;UBERON:0003056!3.26e-09!49;UBERON:0004111!2.36e-07!122;UBERON:0002021!8.40e-07!10;UBERON:0000411!8.40e-07!10;UBERON:0001950!8.40e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.15e-21,54;UBERON:0001049,5.50e-21,52;UBERON:0005068,5.50e-21,52;UBERON:0006241,5.50e-21,52;UBERON:0007135,5.50e-21,52;UBERON:0001017,2.08e-19,73;UBERON:0001016,1.48e-18,75;UBERON:0002020,1.41e-17,34;UBERON:0010371,5.42e-17,73;UBERON:0004121,6.07e-17,95;UBERON:0000924,6.07e-17,95;UBERON:0006601,6.07e-17,95;UBERON:0002346,5.18e-16,64;UBERON:0003075,5.18e-16,64;UBERON:0007284,5.18e-16,64;UBERON:0000955,8.83e-16,47;UBERON:0006238,8.83e-16,47;UBERON:0002616,3.94e-15,46;UBERON:0003080,1.41e-12,40;UBERON:0003528,2.51e-12,29;UBERON:0002791,2.51e-12,29;UBERON:0001893,2.51e-12,29;UBERON:0002021,6.26e-12,10;UBERON:0000411,6.26e-12,10;UBERON:0001950,6.26e-12,10;UBERON:0002780,1.01e-11,39;UBERON:0001890,1.01e-11,39;UBERON:0006240,1.01e-11,39;UBERON:0010314,3.30e-10,92;UBERON:0003076,5.98e-10,12;UBERON:0003057,5.98e-10,12;UBERON:0003056,8.63e-10,49;UBERON:0002420,6.15e-09,8;UBERON:0007245,6.15e-09,8;UBERON:0010009,6.15e-09,8;UBERON:0010011,6.15e-09,8;UBERON:0000454,6.15e-09,8;UBERON:0004111,2.96e-08,122;UBERON:0002240,3.48e-08,6;UBERON:0005174,3.48e-08,6;UBERON:0001137,3.48e-08,6;UBERON:0001948,1.77e-07,5;UBERON:0002315,1.77e-07,5
|phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0.332469290716985,0.612508068787107,3.76678467663217,3.906676722619,3.66466620781659,3.52938892818609,6.83045484958446,5.34061388334269,0.251793635951155,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.540023753326763,1.05162480675691,4.28476476605705,3.53389665522582,0.734944795289724,0.766763768145891,0.919218786610021,0,1.91531007127782,2.15049146558741,1.97829431595291,1.73826522844578,2.08365348222704,1.3959149950069,2.25105044012672,1.22238598221448,3.24091444021034,4.41352210477219,2.05039390407831,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0.506719730950197,0,0.45673551887624,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.940709657085638,0.628332956648377,0.247194967734374,0.578397427679647,0.884610551949874,0.323533699894818,0,0,0,2.92780797011547,2.09446706813455,0.255457055208591,0.718890747035522,0.599902730993408,0.762421362438388,2.69623150928681,4.11750542536764,3.64397621127307,1.21677024134594,2.04572365864264,1.24672826735736,1.94689515681309,0.203678727700633,0.870848794270651,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0,0.150704817835715,0.544291993210623,0.384341160854549,0.374806898238915,1.03481348295606,0.431135985865684,0.945530400839096,0,0.219195732427575,0,0.348252166522167,0,0,1.40442637462647,1.28673953557358,1.42081749697796,0.828503090142008,0.469052119962192,0.36012412292203,1.42046841351126,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0,0.405344047729279,0.438599962275997,0.658650345873152,0.134206418760372,0.841159794256509,0.92614151141356,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0.898819408654221,0.432276099749388,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.387904974335251,0.420814919341911,0.252946148497029,0.442830443938806,0.156998727841375,0,0.296452627087149,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.814824882210129,1.01847051465113,0,1.00503754465089,0.476087281772027,1.56106918286239,0.945810864637146,0.221464689648775,0.797273843287435,0.491589944147214,0.345369963731791,0.723245292907558,0,0,1.47529281905711,2.75936746304733,2.24770825982909,3.8679856575427,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0,1.11399337041197,0.566153061577665,0,0.584511715822624,0.395287777946524,1.28528526568723,0.141940085208269,0,0.488660878060728,0.494910368917606,0,0.242780636154981,1.51161778482376,3.39489143560617,2.65771703592696,1.84461088766356,1.29214146584111,1.09060118843252,0.712994756769443,2.84433082142234,5.27093042874994,0,1.02131881726136,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,0.493647061806363,1.522324745573,0.23467170806371,0.42366414172764,4.85162475720916,0,0,0.241251699712623,0,0,0,1.48340241608408,0.683483523191411,0.412773735926445,0,0.376736914009382,0,0,1.5298058699447,0.839708713941948,1.38199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0.432021363287205,0.418176592028937,0.655087691238533,0.674321731924103,0.41326727862668,0.523511883968059,0.129614973291793,6.21339313086926,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.938857909166032,0.13020438484395,0.629156066554265,0,0.576060012515731,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,0.772758376128762,0.563047426353546,0.549454872801795,0,2.50786052017682,2.82375921308533,1.38097570952153,4.01026859407578,2.57779773515531,3.42541259885321,3.0215755895588,2.70009000092722,1.80128481289688,2.71885445390523,2.5888015587591,0.103787347584177,0,0.682934423016537,0,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,1.26348605881899,0.25347929989024,0.754505365544305,0.655490552289177,0.640251524048693,0.516919220600519,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,0.685738504770831,0.70990322463735,1.1921809497366,0.872078499793971,0.752875043322645,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.5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|phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0.332469290716985,0.612508068787107,3.76678467663217,3.906676722619,3.66466620781659,3.52938892818609,6.83045484958446,5.34061388334269,0.251793635951155,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.540023753326763,1.05162480675691,4.28476476605705,3.53389665522582,0.734944795289724,0.766763768145891,0.919218786610021,0,1.91531007127782,2.15049146558741,1.97829431595291,1.73826522844578,2.08365348222704,1.3959149950069,2.25105044012672,1.22238598221448,3.24091444021034,4.41352210477219,2.05039390407831,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0.506719730950197,0,0.45673551887624,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.940709657085638,0.628332956648377,0.247194967734374,0.578397427679647,0.884610551949874,0.323533699894818,0,0,0,2.92780797011547,2.09446706813455,0.255457055208591,0.718890747035522,0.599902730993408,0.762421362438388,2.69623150928681,4.11750542536764,3.64397621127307,1.21677024134594,2.04572365864264,1.24672826735736,1.94689515681309,0.203678727700633,0.870848794270651,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0,0.150704817835715,0.544291993210623,0.384341160854549,0.374806898238915,1.03481348295606,0.431135985865684,0.945530400839096,0,0.219195732427575,0,0.348252166522167,0,0,1.40442637462647,1.28673953557358,1.42081749697796,0.828503090142008,0.469052119962192,0.36012412292203,1.42046841351126,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0,0.405344047729279,0.438599962275997,0.658650345873152,0.134206418760372,0.841159794256509,0.92614151141356,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0.898819408654221,0.432276099749388,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.387904974335251,0.420814919341911,0.252946148497029,0.442830443938806,0.156998727841375,0,0.296452627087149,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.814824882210129,1.01847051465113,0,1.00503754465089,0.476087281772027,1.56106918286239,0.945810864637146,0.221464689648775,0.797273843287435,0.491589944147214,0.345369963731791,0.723245292907558,0,0,1.47529281905711,2.75936746304733,2.24770825982909,3.8679856575427,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0,1.11399337041197,0.566153061577665,0,0.584511715822624,0.395287777946524,1.28528526568723,0.141940085208269,0,0.488660878060728,0.494910368917606,0,0.242780636154981,1.51161778482376,3.39489143560617,2.65771703592696,1.84461088766356,1.29214146584111,1.09060118843252,0.712994756769443,2.84433082142234,5.27093042874994,0,1.02131881726136,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,0.493647061806363,1.522324745573,0.23467170806371,0.42366414172764,4.85162475720916,0,0,0.241251699712623,0,0,0,1.48340241608408,0.683483523191411,0.412773735926445,0,0.376736914009382,0,0,1.5298058699447,0.839708713941948,1.38199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0.432021363287205,0.418176592028937,0.655087691238533,0.674321731924103,0.41326727862668,0.523511883968059,0.129614973291793,6.21339313086926,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.938857909166032,0.13020438484395,0.629156066554265,0,0.576060012515731,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,0.772758376128762,0.563047426353546,0.549454872801795,0,2.50786052017682,2.82375921308533,1.38097570952153,4.01026859407578,2.57779773515531,3.42541259885321,3.0215755895588,2.70009000092722,1.80128481289688,2.71885445390523,2.5888015587591,0.103787347584177,0,0.682934423016537,0,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,1.26348605881899,0.25347929989024,0.754505365544305,0.655490552289177,0.640251524048693,0.516919220600519,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,0.685738504770831,0.70990322463735,1.1921809497366,0.872078499793971,0.752875043322645,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.5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|short_description=p4@Ica1
}}
}}

Latest revision as of 20:49, 1 October 2015

Short description:p4@Ica1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ica1_5end
Coexpression cluster:NA
Association with transcript: -59bp_to_ENSMUST00000115519, ENSMUST00000153390_5end
EntrezGene:Ica1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ica1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.43e-1023
neuroblast (sensu Vertebrata)3.43e-1023
neuron1.51e-0733
neuronal stem cell1.51e-0733
neuroblast1.51e-0733
electrically signaling cell1.51e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.15e-2154
neural tube5.50e-2152
neural rod5.50e-2152
future spinal cord5.50e-2152
neural keel5.50e-2152
central nervous system2.08e-1973
nervous system1.48e-1875
gray matter1.41e-1734
ecto-epithelium5.42e-1773
ectoderm-derived structure6.07e-1795
ectoderm6.07e-1795
presumptive ectoderm6.07e-1795
neurectoderm5.18e-1664
neural plate5.18e-1664
presumptive neural plate5.18e-1664
brain8.83e-1647
future brain8.83e-1647
regional part of brain3.94e-1546
anterior neural tube1.41e-1240
brain grey matter2.51e-1229
regional part of telencephalon2.51e-1229
telencephalon2.51e-1229
occipital lobe6.26e-1210
visual cortex6.26e-1210
neocortex6.26e-1210
regional part of forebrain1.01e-1139
forebrain1.01e-1139
future forebrain1.01e-1139
structure with developmental contribution from neural crest3.30e-1092
posterior neural tube5.98e-1012
chordal neural plate5.98e-1012
pre-chordal neural plate8.63e-1049
basal ganglion6.15e-098
nuclear complex of neuraxis6.15e-098
aggregate regional part of brain6.15e-098
collection of basal ganglia6.15e-098
cerebral subcortex6.15e-098
anatomical conduit2.96e-08122
spinal cord3.48e-086
dorsal region element3.48e-086
dorsum3.48e-086
regional part of spinal cord1.77e-075
gray matter of spinal cord1.77e-075
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