FFCP PHASE1:Mm9::chr5:125342586..125342597,-: Difference between revisions
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{{FFCP|EntrezGene=215707|HGNC=|MCL_coexpression_id=709|UniProt=Q8VDN4|association_with_transcript=0bp_to_NM_144819,uc008zqr.1_5end|description=CAGE_peak_8_at_Ccdc92_5end|id=chr5:125342586..125342597,-|ontology_enrichment_celltype=CL:0000117!8.72e-07!23;CL:0000337!8.72e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.09e-10,23;CL:0000337,2.09e-10,23;CL:0002614,1.46e-09,3;CL:0002610,1.66e-09,3;CL:0002612,2.16e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.94e-17!75;UBERON:0001016!9.94e-17!75;UBERON:0001017!7.27e-16!73;UBERON:0005743!7.27e-16!73;UBERON:0001049!1.38e-15!52;UBERON:0005068!1.38e-15!52;UBERON:0006241!1.38e-15!52;UBERON:0007135!1.38e-15!52;UBERON:0002346!2.88e-15!71;UBERON:0003075!2.88e-15!71;UBERON:0007284!2.88e-15!71;UBERON:0000955!9.66e-15!50;UBERON:0006238!9.66e-15!50;UBERON:0004121!2.11e-14!102;UBERON:0000924!2.11e-14!102;UBERON:0006601!2.11e-14!102;UBERON:0002616!4.15e-14!49;UBERON:0000033!4.66e-12!63;UBERON:0002020!7.60e-10!34;UBERON:0003080!8.80e-10!40;UBERON:0002780!3.54e-09!39;UBERON:0001890!3.54e-09!39;UBERON:0006240!3.54e-09!39;UBERON:0003056!5.82e-09!49;UBERON:0007811!2.70e-08!86;UBERON:0002791!2.59e-07!29;UBERON:0003528!2.59e-07!29;UBERON:0001893!2.59e-07!29;UBERON:0003076!3.22e-07!12;UBERON:0003057!3.22e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.08e-25,54;UBERON:0001016,7.25e-22,75;UBERON:0001049,2.56e-21,52;UBERON:0005068,2.56e-21,52;UBERON:0006241,2.56e-21,52;UBERON:0007135,2.56e-21,52;UBERON:0001017,9.25e-21,73;UBERON:0003076,7.17e-18,12;UBERON:0003057,7.17e-18,12;UBERON:0002346,2.05e-16,64;UBERON:0003075,2.05e-16,64;UBERON:0007284,2.05e-16,64;UBERON:0004121,4.42e-16,95;UBERON:0000924,4.42e-16,95;UBERON:0006601,4.42e-16,95;UBERON:0000955,1.93e-15,47;UBERON:0006238,1.93e-15,47;UBERON:0002616,5.44e-14,46;UBERON:0010371,8.49e-14,73;UBERON:0002950,3.95e-12,4;UBERON:0001891,3.95e-12,4;UBERON:0009616,3.95e-12,4;UBERON:0010286,3.95e-12,4;UBERON:0002240,3.90e-11,6;UBERON:0005174,3.90e-11,6;UBERON:0001137,3.90e-11,6;UBERON:0002020,1.20e-10,34;UBERON:0010314,5.86e-10,92;UBERON:0002038,1.46e-09,3;UBERON:0009663,1.46e-09,3;UBERON:0009661,1.46e-09,3;UBERON:0000125,1.46e-09,3;UBERON:0002308,1.46e-09,3;UBERON:0004684,1.66e-09,3;UBERON:0002275,1.66e-09,3;UBERON:0003080,6.71e-09,40;UBERON:0001948,1.81e-08,5;UBERON:0002315,1.81e-08,5;UBERON:0002257,2.16e-08,3;UBERON:0004733,2.34e-08,6;UBERON:0004732,2.34e-08,6;UBERON:0002028,2.34e-08,6;UBERON:0007277,2.34e-08,6;UBERON:0002780,1.13e-07,39;UBERON:0001890,1.13e-07,39;UBERON:0006240,1.13e-07,39;UBERON:0000025,3.99e-07,114;UBERON:0001896,4.50e-07,2;UBERON:0002298,4.50e-07,2;UBERON:0005290,4.50e-07,2;UBERON:0010096,4.50e-07,2;UBERON:0003056,8.67e-07,49|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0.645616617207881,0.281577444303333,0.468129052643987,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0,0.137114433605739,0,1.44573593256819,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.219686182734472,0.972149495371417,0.419959264876088,0,0.503347818173209,0,0.672187598284928,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0,1.42825492201902,0.441737081903227,0.489963196859816,0.191690942036473,0,4.40463523997555,3.95830748064082,4.6081959976873,0.659431438650969,0.0914876436024097,0.52091337055676,5.862842979029,6.19038871034848,1.98637722109853,1.76777151284201,1.42371680799103,2.05039390407831,0.302904773332736,1.73814588245607,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0.884610551949874,0,0.662524555381181,0.484875253135222,0,6.14839673724249,4.81727425670947,0,0,0,0,3.14560342750128,2.74500361691176,0.125654352112864,0.869121600961382,0.511430914660661,2.49345653471472,1.78465389374533,0.203678727700633,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0.841159794256509,0.411618449517138,1.32167513193519,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0.983179888294428,0.690739927463582,0.867894351489069,0,0,0,0,5.45872005958493,5.39173758324135,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.584511715822624,0,1.92792789853084,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,2.13125464380219,0.469343416127421,0,0.882113592219848,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,9.08583979851498,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,6.76431526421028,0,0.496375471371293,0.388902376688095,0,0.168956125490778,0.117357238645754,0.13020438484395,0.629156066554265,2.17425708743405,2.88030006257865,0,0.202725215290164,0,0,0.179026695667481,0.596044064343795,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0,1.20297227640581,0,0.755393897389701,1.35004500046361,1.35096360967266,0.453142408984205,2.07104124700728,0.415149390336707,0,0.512200817262403,0.486213434136588,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,1.01391719956096,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0,0,0.476872379894642,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0,0,0,0.0985044823755635,0.409231043169689,0.619747364743864,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0,0.463735671240843|short_description=p8@Ccdc92}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215707 | |||
|HGNC= | |||
|MCL_coexpression_id=709 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VDN4 | |||
|association_with_transcript=0bp_to_NM_144819,uc008zqr.1_5end | |||
|cluster_id=chr5:125342586..125342597,- | |||
|description=CAGE_peak_8_at_Ccdc92_5end | |||
|id=chr5:125342586..125342597,- | |||
|ontology_enrichment_celltype=CL:0000117!8.72e-07!23;CL:0000337!8.72e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.09e-10,23;CL:0000337,2.09e-10,23;CL:0002614,1.46e-09,3;CL:0002610,1.66e-09,3;CL:0002612,2.16e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.94e-17!75;UBERON:0001016!9.94e-17!75;UBERON:0001017!7.27e-16!73;UBERON:0005743!7.27e-16!73;UBERON:0001049!1.38e-15!52;UBERON:0005068!1.38e-15!52;UBERON:0006241!1.38e-15!52;UBERON:0007135!1.38e-15!52;UBERON:0002346!2.88e-15!71;UBERON:0003075!2.88e-15!71;UBERON:0007284!2.88e-15!71;UBERON:0000955!9.66e-15!50;UBERON:0006238!9.66e-15!50;UBERON:0004121!2.11e-14!102;UBERON:0000924!2.11e-14!102;UBERON:0006601!2.11e-14!102;UBERON:0002616!4.15e-14!49;UBERON:0000033!4.66e-12!63;UBERON:0002020!7.60e-10!34;UBERON:0003080!8.80e-10!40;UBERON:0002780!3.54e-09!39;UBERON:0001890!3.54e-09!39;UBERON:0006240!3.54e-09!39;UBERON:0003056!5.82e-09!49;UBERON:0007811!2.70e-08!86;UBERON:0002791!2.59e-07!29;UBERON:0003528!2.59e-07!29;UBERON:0001893!2.59e-07!29;UBERON:0003076!3.22e-07!12;UBERON:0003057!3.22e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.08e-25,54;UBERON:0001016,7.25e-22,75;UBERON:0001049,2.56e-21,52;UBERON:0005068,2.56e-21,52;UBERON:0006241,2.56e-21,52;UBERON:0007135,2.56e-21,52;UBERON:0001017,9.25e-21,73;UBERON:0003076,7.17e-18,12;UBERON:0003057,7.17e-18,12;UBERON:0002346,2.05e-16,64;UBERON:0003075,2.05e-16,64;UBERON:0007284,2.05e-16,64;UBERON:0004121,4.42e-16,95;UBERON:0000924,4.42e-16,95;UBERON:0006601,4.42e-16,95;UBERON:0000955,1.93e-15,47;UBERON:0006238,1.93e-15,47;UBERON:0002616,5.44e-14,46;UBERON:0010371,8.49e-14,73;UBERON:0002950,3.95e-12,4;UBERON:0001891,3.95e-12,4;UBERON:0009616,3.95e-12,4;UBERON:0010286,3.95e-12,4;UBERON:0002240,3.90e-11,6;UBERON:0005174,3.90e-11,6;UBERON:0001137,3.90e-11,6;UBERON:0002020,1.20e-10,34;UBERON:0010314,5.86e-10,92;UBERON:0002038,1.46e-09,3;UBERON:0009663,1.46e-09,3;UBERON:0009661,1.46e-09,3;UBERON:0000125,1.46e-09,3;UBERON:0002308,1.46e-09,3;UBERON:0004684,1.66e-09,3;UBERON:0002275,1.66e-09,3;UBERON:0003080,6.71e-09,40;UBERON:0001948,1.81e-08,5;UBERON:0002315,1.81e-08,5;UBERON:0002257,2.16e-08,3;UBERON:0004733,2.34e-08,6;UBERON:0004732,2.34e-08,6;UBERON:0002028,2.34e-08,6;UBERON:0007277,2.34e-08,6;UBERON:0002780,1.13e-07,39;UBERON:0001890,1.13e-07,39;UBERON:0006240,1.13e-07,39;UBERON:0000025,3.99e-07,114;UBERON:0001896,4.50e-07,2;UBERON:0002298,4.50e-07,2;UBERON:0005290,4.50e-07,2;UBERON:0010096,4.50e-07,2;UBERON:0003056,8.67e-07,49 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0.645616617207881,0.281577444303333,0.468129052643987,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0,0.137114433605739,0,1.44573593256819,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.219686182734472,0.972149495371417,0.419959264876088,0,0.503347818173209,0,0.672187598284928,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0,1.42825492201902,0.441737081903227,0.489963196859816,0.191690942036473,0,4.40463523997555,3.95830748064082,4.6081959976873,0.659431438650969,0.0914876436024097,0.52091337055676,5.862842979029,6.19038871034848,1.98637722109853,1.76777151284201,1.42371680799103,2.05039390407831,0.302904773332736,1.73814588245607,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0.884610551949874,0,0.662524555381181,0.484875253135222,0,6.14839673724249,4.81727425670947,0,0,0,0,3.14560342750128,2.74500361691176,0.125654352112864,0.869121600961382,0.511430914660661,2.49345653471472,1.78465389374533,0.203678727700633,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0.841159794256509,0.411618449517138,1.32167513193519,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0.983179888294428,0.690739927463582,0.867894351489069,0,0,0,0,5.45872005958493,5.39173758324135,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.584511715822624,0,1.92792789853084,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,2.13125464380219,0.469343416127421,0,0.882113592219848,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,9.08583979851498,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,6.76431526421028,0,0.496375471371293,0.388902376688095,0,0.168956125490778,0.117357238645754,0.13020438484395,0.629156066554265,2.17425708743405,2.88030006257865,0,0.202725215290164,0,0,0.179026695667481,0.596044064343795,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0,1.20297227640581,0,0.755393897389701,1.35004500046361,1.35096360967266,0.453142408984205,2.07104124700728,0.415149390336707,0,0.512200817262403,0.486213434136588,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,1.01391719956096,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0,0,0.476872379894642,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0,0,0,0.0985044823755635,0.409231043169689,0.619747364743864,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0,0.463735671240843 | |||
|short_description=p8@Ccdc92 | |||
}} |
Latest revision as of 22:00, 1 October 2015
Short description: | p8@Ccdc92 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ccdc92_5end |
Coexpression cluster: | MCL_coexpression_mm9:709 |
Association with transcript: | 0bp_to_NM_144819, uc008zqr.1_5end |
EntrezGene: | Ccdc92 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.09e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-10 | 23 |
neuron of the substantia nigra | 1.46e-09 | 3 |
raphe nuclei neuron | 1.66e-09 | 3 |
neuron of the ventral spinal cord | 2.16e-08 | 3 |