FF:10056-101H2: Difference between revisions

Latest revision as of 12:18, 3 June 2020

Name:	spinal cord, fetal, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs11764
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	spinal cord
dev stage	29 weeks fetus
sex	female
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Biochain
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	A703261
catalog number	Cat:RtHFN: Spinal cord
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005114

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11764		CAGE		DRX008729		DRR009601

Accession ID Hg19

Library id		BAM		CTSS
CNhs11764		DRZ001026		DRZ002411

Accession ID Hg38

Library id		BAM		CTSS
CNhs11764		DRZ012376		DRZ013761

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.266
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.088
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.127
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.43
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.266
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.244
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.153
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.153
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.356
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.493
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0791
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.291
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.153
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.37
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.407
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.153
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.05
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0596
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.153
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0989
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.43
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.153
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.153
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.266
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.682
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.138
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.43
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.153
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.262
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.406
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.642
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.153
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.266
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	1.263
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.549
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.153
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.266
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.153
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.356
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.00707
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.734
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.153
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11764

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	6.14425e-4
MA0003.1	MA0003.1	0.297
MA0004.1	MA0004.1	0.196
MA0006.1	MA0006.1	0.738
MA0007.1	MA0007.1	0.445
MA0009.1	MA0009.1	0.0877
MA0014.1	MA0014.1	0.306
MA0017.1	MA0017.1	0.0118
MA0018.2	MA0018.2	0.259
MA0019.1	MA0019.1	0.762
MA0024.1	MA0024.1	0.421
MA0025.1	MA0025.1	0.481
MA0027.1	MA0027.1	0.569
MA0028.1	MA0028.1	0.0149
MA0029.1	MA0029.1	0.248
MA0030.1	MA0030.1	0.853
MA0031.1	MA0031.1	0.182
MA0035.2	MA0035.2	0.0654
MA0038.1	MA0038.1	0.144
MA0039.2	MA0039.2	0.148
MA0040.1	MA0040.1	0.647
MA0041.1	MA0041.1	0.611
MA0042.1	MA0042.1	0.993
MA0043.1	MA0043.1	0.438
MA0046.1	MA0046.1	0.0366
MA0047.2	MA0047.2	0.00799
MA0048.1	MA0048.1	0.205
MA0050.1	MA0050.1	0.00216
MA0051.1	MA0051.1	0.0497
MA0052.1	MA0052.1	0.374
MA0055.1	MA0055.1	0.00322
MA0057.1	MA0057.1	0.693
MA0058.1	MA0058.1	0.187
MA0059.1	MA0059.1	0.0462
MA0060.1	MA0060.1	0.15
MA0061.1	MA0061.1	0.00513
MA0062.2	MA0062.2	6.7581e-5
MA0065.2	MA0065.2	0.00146
MA0066.1	MA0066.1	0.0271
MA0067.1	MA0067.1	0.652
MA0068.1	MA0068.1	0.0219
MA0069.1	MA0069.1	0.741
MA0070.1	MA0070.1	0.404
MA0071.1	MA0071.1	0.122
MA0072.1	MA0072.1	0.277
MA0073.1	MA0073.1	0.51
MA0074.1	MA0074.1	0.278
MA0076.1	MA0076.1	0.0146
MA0077.1	MA0077.1	0.0613
MA0078.1	MA0078.1	0.838
MA0079.2	MA0079.2	0.671
MA0080.2	MA0080.2	2.23987e-9
MA0081.1	MA0081.1	0.0251
MA0083.1	MA0083.1	0.778
MA0084.1	MA0084.1	0.171
MA0087.1	MA0087.1	0.187
MA0088.1	MA0088.1	0.0601
MA0090.1	MA0090.1	0.782
MA0091.1	MA0091.1	0.645
MA0092.1	MA0092.1	0.392
MA0093.1	MA0093.1	0.226
MA0099.2	MA0099.2	4.70196e-20
MA0100.1	MA0100.1	0.423
MA0101.1	MA0101.1	0.00115
MA0102.2	MA0102.2	0.0382
MA0103.1	MA0103.1	0.0823
MA0104.2	MA0104.2	0.166
MA0105.1	MA0105.1	6.03532e-5
MA0106.1	MA0106.1	0.026
MA0107.1	MA0107.1	0.00295
MA0108.2	MA0108.2	3.55082e-5
MA0111.1	MA0111.1	0.666
MA0112.2	MA0112.2	9.35709e-4
MA0113.1	MA0113.1	0.462
MA0114.1	MA0114.1	0.0103
MA0115.1	MA0115.1	0.215
MA0116.1	MA0116.1	0.00168
MA0117.1	MA0117.1	0.655
MA0119.1	MA0119.1	0.0557
MA0122.1	MA0122.1	0.718
MA0124.1	MA0124.1	0.46
MA0125.1	MA0125.1	0.197
MA0131.1	MA0131.1	0.856
MA0135.1	MA0135.1	0.164
MA0136.1	MA0136.1	5.01209e-16
MA0137.2	MA0137.2	0.581
MA0138.2	MA0138.2	0.182
MA0139.1	MA0139.1	0.209
MA0140.1	MA0140.1	0.0252
MA0141.1	MA0141.1	0.0112
MA0142.1	MA0142.1	0.619
MA0143.1	MA0143.1	0.247
MA0144.1	MA0144.1	0.302
MA0145.1	MA0145.1	0.353
MA0146.1	MA0146.1	0.0132
MA0147.1	MA0147.1	0.0882
MA0148.1	MA0148.1	0.0394
MA0149.1	MA0149.1	0.00609
MA0150.1	MA0150.1	5.11222e-7
MA0152.1	MA0152.1	0.234
MA0153.1	MA0153.1	0.915
MA0154.1	MA0154.1	0.0139
MA0155.1	MA0155.1	0.823
MA0156.1	MA0156.1	6.88429e-10
MA0157.1	MA0157.1	0.118
MA0159.1	MA0159.1	0.00749
MA0160.1	MA0160.1	0.0177
MA0162.1	MA0162.1	0.226
MA0163.1	MA0163.1	1.39833e-7
MA0164.1	MA0164.1	0.573
MA0258.1	MA0258.1	0.0203
MA0259.1	MA0259.1	0.446

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11764

Novel motif	Logo	P-value
1	1	0.0296
10	10	0.0353
100	100	0.375
101	101	0.903
102	102	0.899
103	103	0.0636
104	104	0.239
105	105	0.162
106	106	0.157
107	107	0.541
108	108	0.765
109	109	0.00259
11	11	0.0154
110	110	0.0434
111	111	0.131
112	112	0.394
113	113	0.266
114	114	0.0313
115	115	0.331
116	116	0.47
117	117	0.00393
118	118	0.0897
119	119	0.149
12	12	0.539
120	120	0.161
121	121	0.735
122	122	0.736
123	123	0.56
124	124	0.393
125	125	0.462
126	126	0.106
127	127	0.176
128	128	0.45
129	129	0.467
13	13	0.00685
130	130	0.418
131	131	0.24
132	132	0.349
133	133	0.0817
134	134	0.645
135	135	0.263
136	136	0.0402
137	137	0.316
138	138	0.567
139	139	0.0812
14	14	0.668
140	140	0.186
141	141	0.218
142	142	0.784
143	143	0.00108
144	144	0.947
145	145	0.396
146	146	0.585
147	147	0.767
148	148	0.193
149	149	0.163
15	15	0.0341
150	150	0.239
151	151	0.662
152	152	0.174
153	153	0.451
154	154	0.664
155	155	0.216
156	156	0.427
157	157	0.479
158	158	0.752
159	159	0.155
16	16	0.134
160	160	0.257
161	161	0.149
162	162	0.551
163	163	0.524
164	164	0.0359
165	165	0.352
166	166	0.255
167	167	0.239
168	168	0.625
169	169	0.0109
17	17	0.128
18	18	0.0657
19	19	0.415
2	2	0.932
20	20	0.15
21	21	0.16
22	22	0.283
23	23	0.484
24	24	0.0494
25	25	0.47
26	26	5.32485e-4
27	27	0.664
28	28	0.507
29	29	0.00809
3	3	0.031
30	30	0.437
31	31	0.917
32	32	0.801
33	33	0.0939
34	34	0.997
35	35	0.391
36	36	0.103
37	37	0.0292
38	38	0.254
39	39	0.805
4	4	0.936
40	40	0.0557
41	41	0.155
42	42	0.123
43	43	0.131
44	44	0.252
45	45	0.852
46	46	0.0516
47	47	0.0426
48	48	0.0697
49	49	0.13
5	5	0.319
50	50	0.576
51	51	0.39
52	52	0.931
53	53	0.899
54	54	0.466
55	55	0.242
56	56	0.52
57	57	0.313
58	58	0.22
59	59	0.207
6	6	0.977
60	60	0.195
61	61	0.0828
62	62	0.13
63	63	0.194
64	64	0.202
65	65	0.302
66	66	0.11
67	67	0.302
68	68	0.348
69	69	0.763
7	7	0.105
70	70	0.0109
71	71	0.00779
72	72	0.222
73	73	0.0394
74	74	0.793
75	75	0.0133
76	76	0.149
77	77	0.239
78	78	0.00829
79	79	0.998
8	8	0.103
80	80	0.686
81	81	0.583
82	82	0.545
83	83	0.358
84	84	0.677
85	85	0.391
86	86	0.136
87	87	0.00488
88	88	0.731
89	89	0.427
9	9	0.649
90	90	0.0698
91	91	0.794
92	92	0.398
93	93	0.297
94	94	0.058
95	95	0.0114
96	96	0.318
97	97	0.891
98	98	0.11
99	99	0.787

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11764

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010056 human spinal cord - fetal sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002240 (spinal cord)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0000489 (cavitated compound organ)
0005174 (dorsal region element)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001137 (dorsum)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010056 (human spinal cord - fetal sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006241 (future spinal cord)
UBERON:0003057 (chordal neural plate)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000073,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000489,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001137,UBERON:0002050,UBERON:0002100,UBERON:0002240,UBERON:0002346,UBERON:0002532,UBERON:0003057,UBERON:0003075,UBERON:0003076,UBERON:0003103,UBERON:0004121,UBERON:0005068,UBERON:0005174,UBERON:0005177,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007135,UBERON:0007284
+|DRA_sample_Accession=CAGE@SAMD00005114
+|accession_numbers=CAGE;DRX008729;DRR009601;DRZ001026;DRZ002411;DRZ012376;DRZ013761
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002240,UBERON:0000479,UBERON:0004121,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0000489,UBERON:0005174,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001137
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010056
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.83!679.21!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.48!303.89!OLIG1;;chr22:38380543..38380569,-!p1@SOX10!2.32!208.37!SOX10;;chr21:34398234..34398250,+!p1@OLIG2!2.13!133.98!OLIG2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.08!118.34!PEG3;;chr3:181429704..181429722,+!p1@SOX2!2.00!98.06!SOX2;;chr10:48355030..48355090,+!p1@ZNF488!1.95!112.00!ZNF488;;chr12:106976774..106976788,+!p1@RFX4!1.93!84.95!RFX4;;chr3:147127177..147127194,+!p2@ZIC1!1.89!76.50!ZIC1;;chr11:61520075..61520136,+!p1@C11orf9!1.87!150.47!C11orf9;;chr3:181429741..181429767,+!p2@SOX2!1.83!66.36!SOX2;;chr3:147127142..147127168,+!p1@ZIC1!1.82!65.09!ZIC1;;chr4:57547454..57547469,-!p1@HOPX!1.78!59.17!HOPX;;chr16:1031762..1031781,+!p1@SOX8!1.75!54.95!SOX8;;chr2:145277882..145277967,-!p3@ZEB2!1.71!84.11!ZEB2;;chr10:134599649..134599653,-!p1@NKX6-2!1.67!46.07!NKX6-2;;chr2:5832508..5832524,+!p1@SOX11!1.66!44.80!SOX11;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.66!44.38!POU3F3;;chr21:34442540..34442560,+!p2@OLIG1!1.61!40.15!OLIG1;;chr1:2461692..2461710,-!p1@HES5!1.57!35.93!HES5;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.57!35.93!HOXC5;;chr14:33403881..33403924,+!p1@NPAS3!1.57!35.93!NPAS3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.55!34.66!ZBED1;;chr17:46692457..46692484,-!p2@HOXB8!1.55!34.24!HOXB8;;chr6:19837592..19837621,+!p1@ID4!1.54!199.07!ID4;;chr20:50179368..50179392,-!p2@NFATC2!1.54!43.11!NFATC2;;chr12:103351444..103351461,+!p1@ASCL1!1.54!33.39!ASCL1;;chr17:46682321..46682362,-!p1@HOXB6!1.51!31.28!HOXB6;;chr2:19558373..19558392,-!p1@OSR1!1.49!79.88!OSR1;;chr1:40105299..40105326,-!p1@HEYL!1.49!29.59!HEYL;;chr9:77112244..77112262,+!p1@RORB!1.47!31.70!RORB;;chr11:8102846..8102892,+!p1@TUB!1.45!37.19!TUB;;chr6:126070769..126070801,+!p1@HEY2!1.45!30.85!HEY2;;chr19:46801639..46801699,+!p1@HIF3A!1.45!27.05!HIF3A;;chr2:223163706..223163730,-!p1@PAX3!1.45!27.05!PAX3;;chr17:53342311..53342400,+!p1@HLF!1.43!29.59!HLF;;chr8:80679993..80680011,-!p1@HEY1!1.42!35.93!HEY1;;chr15:80696703..80696754,+!p1@ARNT2!1.42!33.81!ARNT2;;chr4:81118647..81118666,+!p1@PRDM8!1.42!33.39!PRDM8;;chr20:62680984..62680999,-!p1@SOX18!1.41!32.12!SOX18;;chr7:27192185..27192209,-!p1@HOXA3!1.41!24.94!HOXA3;;chr13:100634031..100634045,+!p1@ZIC2!1.41!24.51!ZIC2;;chr5:158526917..158526932,-!p1@EBF1!1.40!58.33!EBF1;;chr12:106976678..106976708,+!p2@RFX4!1.39!23.67!RFX4;;chr4:57547820..57547829,-!p8@HOPX!1.39!23.67!HOPX;;chr2:239148671..239148686,-!p1@HES6!1.37!79.46!HES6;;chr17:46692624..46692659,-!p3@HOXB8!1.37!22.40!HOXB8;;chr7:27196217..27196246,-!p2@HOXA7!1.37!22.40!HOXA7;;chr7:27205136..27205164,-!p1@HOXA9!1.36!21.98!HOXA9;;chr5:92919100..92919135,+!p3@NR2F1!1.35!25.78!NR2F1;;chr19:46800289..46800327,+!p2@HIF3A!1.35!21.56!HIF3A;;chr16:86600426..86600441,+!p1@FOXC2!1.31!47.76!FOXC2;;chr12:26277817..26277863,-!p2@BHLHE41!1.31!26.20!BHLHE41;;chr16:79634624..79634642,-!p1@MAF!1.29!71.85!MAF;;chr12:52445218..52445237,+!p1@NR4A1!1.28!223.16!NR4A1;;chr8:53322304..53322340,-!p1@ST18!1.28!18.17!ST18;;chr17:46690839..46690884,-!p1@HOXB8!1.27!17.75!HOXB8;;chr2:145275982..145276003,-!p7@ZEB2!1.25!16.91!ZEB2;;chr8:55370487..55370503,+!p1@SOX17!1.25!16.91!SOX17;;chr15:57511609..57511651,+!p2@TCF12!1.24!27.47!TCF12;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.40!PROX1;;chr5:92918919..92918942,+!p1@NR2F1!1.22!69.32!NR2F1;;chr13:72441315..72441454,-!p1@DACH1!1.22!30.85!DACH1;;chr5:2751762..2751784,-!p1@IRX2!1.22!15.64!IRX2;;chr8:25902876..25902936,-!p1@EBF2!1.20!14.79!EBF2;;chr17:46688334..46688385,-!p1@HOXB7!1.19!21.13!HOXB7;;chr10:131762504..131762555,-!p1@EBF3!1.19!14.37!EBF3;;chr10:48359344..48359376,+!p2@ZNF488!1.19!14.37!ZNF488;;chr21:39870339..39870443,-!p1@ERG!1.19!14.37!ERG;;chr14:61116183..61116208,-!p1@SIX1!1.18!53.68!SIX1;;chr1:61548069..61548102,+!p3@NFIA!1.18!34.24!NFIA;;chr16:51185172..51185197,-!p1@SALL1!1.17!13.95!SALL1;;chr17:46692287..46692317,-!p7@HOXB8!1.17!13.95!HOXB8;;chr18:76739816..76739822,+!p1@SALL3!1.17!13.95!SALL3;;chr8:30890810..30890880,-!p1@PURG!1.17!13.95!PURG;;chr10:64576105..64576133,-!p1@EGR2!1.16!27.90!EGR2;;chr11:31839488..31839515,-!p3@PAX6!1.16!13.52!PAX6;;chr14:22005197..22005261,-!p3@SALL2!1.16!13.52!SALL2;;chr17:46675619..46675642,-!p5@HOXB6!1.16!13.52!HOXB6;;chr16:79634595..79634620,-!p2@MAF!1.15!24.09!MAF;;chr8:80680024..80680046,-!p2@HEY1!1.15!14.79!HEY1;;chr5:158527104..158527135,-!p4@EBF1!1.15!13.10!EBF1;;chr17:74137321..74137337,-!p1@FOXJ1!1.15!13.10!FOXJ1;;chr2:176994408..176994492,+!p1@HOXD8!1.15!13.10!HOXD8;;chr19:13134772..13134822,+!p2@NFIX!1.14!19.02!NFIX;;chr17:46692603..46692621,-!p6@HOXB8!1.14!12.68!HOXB8;;chr19:58545454..58545498,+!p1@ZSCAN1!1.14!12.68!ZSCAN1;;chr20:21494684..21494708,-!p1@NKX2-2!1.14!12.68!NKX2-2;;chr4:57547751..57547764,-!p6@HOPX!1.14!12.68!HOPX;;chr12:54779511..54779577,-!p5@ZNF385A!1.14!12.68!ZNF385A;;chr17:7492684..7492778,-!p2@SOX15!1.12!25.78!SOX15;;chr6:85474299..85474324,-!p1@TBX18!1.12!21.98!TBX18;;chr12:54393880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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002240
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006241,UBERON:0003057,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg38.nobarcode.ctss.bed.gz
 |id=FF:10056-101H2
-|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010056
+|is_a=EFO:0002091;;FF:0010056
+|is_obsolete=
+|library_id=CNhs11764
+|library_id_phase_based=2:CNhs11764
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10056
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10056
 |name=spinal cord, fetal, donor1
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11764,LSID820,release009,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=101
 |rna_catalog_number=Cat:RtHFN: Spinal cord
@@ Line 57: / Line 79: @@
 |rna_weight_ug=10
 |sample_age=
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=A?
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.13770664043504e-276!GO:0005737;cytoplasm;2.20038684564378e-167!GO:0044444;cytoplasmic part;4.48689641820313e-111!GO:0043226;organelle;8.48771992215067e-99!GO:0043229;intracellular organelle;1.70855638158783e-98!GO:0043227;membrane-bound organelle;4.90337269735243e-84!GO:0043231;intracellular membrane-bound organelle;4.90337269735243e-84!GO:0005515;protein binding;9.04320716255106e-83!GO:0044422;organelle part;5.42755497828661e-76!GO:0044446;intracellular organelle part;6.54366734280435e-75!GO:0032991;macromolecular complex;6.02194286951353e-61!GO:0016043;cellular component organization and biogenesis;6.93801311030802e-54!GO:0030529;ribonucleoprotein complex;1.44008218624843e-39!GO:0031090;organelle membrane;1.33456172538199e-37!GO:0005739;mitochondrion;2.06709359550804e-37!GO:0043234;protein complex;8.34494881193564e-35!GO:0033036;macromolecule localization;6.43006334873421e-32!GO:0003723;RNA binding;2.84283825362595e-31!GO:0015031;protein transport;3.51716394030404e-31!GO:0008104;protein localization;2.59447485027375e-29!GO:0046907;intracellular transport;2.59681369793057e-29!GO:0044429;mitochondrial part;6.32986524298887e-29!GO:0045184;establishment of protein localization;1.56591370989772e-28!GO:0043233;organelle lumen;1.00205329128193e-27!GO:0031974;membrane-enclosed lumen;1.00205329128193e-27!GO:0031975;envelope;1.01352502135827e-26!GO:0031967;organelle envelope;1.27006808826404e-26!GO:0044238;primary metabolic process;8.47092794460084e-26!GO:0019538;protein metabolic process;1.15221422199541e-25!GO:0044428;nuclear part;7.60544193338079e-25!GO:0005829;cytosol;9.3295264189079e-25!GO:0005840;ribosome;1.95252506645597e-24!GO:0051641;cellular localization;5.02197884725612e-24!GO:0044237;cellular metabolic process;7.03552489223406e-24!GO:0051649;establishment of cellular localization;9.63744200728482e-24!GO:0006996;organelle organization and biogenesis;8.62005819864197e-23!GO:0044260;cellular macromolecule metabolic process;6.3134772599267e-22!GO:0043170;macromolecule metabolic process;9.0193889105935e-22!GO:0003735;structural constituent of ribosome;2.24555329506857e-21!GO:0044267;cellular protein metabolic process;3.6661856711193e-21!GO:0016071;mRNA metabolic process;1.20433169200343e-20!GO:0065003;macromolecular complex assembly;1.31419491189973e-20!GO:0022607;cellular component assembly;1.35447715377191e-20!GO:0006119;oxidative phosphorylation;1.45260773516193e-20!GO:0005740;mitochondrial envelope;1.48501889336368e-20!GO:0006886;intracellular protein transport;2.37410982383446e-20!GO:0031966;mitochondrial membrane;3.18891677743944e-20!GO:0016192;vesicle-mediated transport;7.33174513550673e-20!GO:0008380;RNA splicing;7.49051849504871e-20!GO:0019866;organelle inner membrane;9.14423983293433e-20!GO:0005794;Golgi apparatus;1.17006505742034e-19!GO:0009058;biosynthetic process;1.29246364525742e-19!GO:0005743;mitochondrial inner membrane;2.02942120843591e-18!GO:0033279;ribosomal subunit;3.25243047366324e-18!GO:0043228;non-membrane-bound organelle;3.25243047366324e-18!GO:0043232;intracellular non-membrane-bound organelle;3.25243047366324e-18!GO:0006412;translation;5.59925122013905e-18!GO:0031988;membrane-bound vesicle;5.22482094159634e-17!GO:0031982;vesicle;1.00871644498015e-16!GO:0006396;RNA processing;1.12463638427988e-16!GO:0044455;mitochondrial membrane part;1.12463638427988e-16!GO:0016023;cytoplasmic membrane-bound vesicle;1.35411631501787e-16!GO:0005634;nucleus;1.41425768589417e-16!GO:0006397;mRNA processing;2.16521482175791e-16!GO:0031410;cytoplasmic vesicle;2.39776017201327e-16!GO:0012505;endomembrane system;5.28302846952911e-16!GO:0009059;macromolecule biosynthetic process;1.13546449028604e-15!GO:0005746;mitochondrial respiratory chain;1.41643124381097e-15!GO:0005783;endoplasmic reticulum;5.00407538473744e-15!GO:0044249;cellular biosynthetic process;5.07310373182958e-15!GO:0048770;pigment granule;8.06003715233271e-15!GO:0042470;melanosome;8.06003715233271e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.12080423020912e-14!GO:0003954;NADH dehydrogenase activity;1.12080423020912e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.12080423020912e-14!GO:0008092;cytoskeletal protein binding;1.15355164157292e-14!GO:0044445;cytosolic part;2.52692646416954e-14!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.40744644269385e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.92897797132048e-13!GO:0005681;spliceosome;5.47474742713888e-13!GO:0031981;nuclear lumen;7.55973407032223e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.19677553190156e-12!GO:0045271;respiratory chain complex I;1.19677553190156e-12!GO:0005747;mitochondrial respiratory chain complex I;1.19677553190156e-12!GO:0007010;cytoskeleton organization and biogenesis;1.31204447830234e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.07894727807949e-12!GO:0042773;ATP synthesis coupled electron transport;2.07894727807949e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.7771965256723e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.84354356607005e-11!GO:0006457;protein folding;2.84485822600354e-11!GO:0016462;pyrophosphatase activity;3.1101654138081e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;4.15222698620929e-11!GO:0031980;mitochondrial lumen;7.36787579970037e-11!GO:0005759;mitochondrial matrix;7.36787579970037e-11!GO:0000166;nucleotide binding;9.52334780679638e-11!GO:0048193;Golgi vesicle transport;1.11696045971447e-10!GO:0017111;nucleoside-triphosphatase activity;1.14652890952281e-10!GO:0030036;actin cytoskeleton organization and biogenesis;2.0405844798778e-10!GO:0030029;actin filament-based process;3.29362221145852e-10!GO:0051082;unfolded protein binding;7.8267149272193e-10!GO:0008134;transcription factor binding;1.14266165946345e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.47952079509359e-09!GO:0015935;small ribosomal subunit;1.52867812577781e-09!GO:0015934;large ribosomal subunit;1.65452458300306e-09!GO:0006605;protein targeting;2.11108592747765e-09!GO:0044432;endoplasmic reticulum part;2.1858301861104e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.81466714214934e-09!GO:0019829;cation-transporting ATPase activity;3.98750011303522e-09!GO:0048523;negative regulation of cellular process;4.66407707619525e-09!GO:0007399;nervous system development;6.87599863708386e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;8.50103771500841e-09!GO:0005654;nucleoplasm;9.58933590778212e-09!GO:0000502;proteasome complex (sensu Eukaryota);9.70041219108934e-09!GO:0044257;cellular protein catabolic process;9.70041219108934e-09!GO:0006511;ubiquitin-dependent protein catabolic process;1.06464855009684e-08!GO:0016874;ligase activity;1.25773537407398e-08!GO:0044431;Golgi apparatus part;1.26474287414474e-08!GO:0003924;GTPase activity;1.28287341902462e-08!GO:0043283;biopolymer metabolic process;1.29470171741154e-08!GO:0008565;protein transporter activity;1.30306396329397e-08!GO:0019941;modification-dependent protein catabolic process;1.37154223942404e-08!GO:0043632;modification-dependent macromolecule catabolic process;1.37154223942404e-08!GO:0016044;membrane organization and biogenesis;2.17484424260738e-08!GO:0022618;protein-RNA complex assembly;2.21127582534193e-08!GO:0006461;protein complex assembly;2.7641247796022e-08!GO:0000902;cell morphogenesis;3.1072280079431e-08!GO:0032989;cellular structure morphogenesis;3.1072280079431e-08!GO:0044265;cellular macromolecule catabolic process;3.13631806160737e-08!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.2750648988199e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.86464343672833e-08!GO:0030163;protein catabolic process;5.37871158026227e-08!GO:0008135;translation factor activity, nucleic acid binding;5.68645434021161e-08!GO:0006512;ubiquitin cycle;6.04986975089048e-08!GO:0051186;cofactor metabolic process;9.24908110268948e-08!GO:0043412;biopolymer modification;1.03428588673541e-07!GO:0048519;negative regulation of biological process;1.17913371995574e-07!GO:0032553;ribonucleotide binding;1.31631951375345e-07!GO:0032555;purine ribonucleotide binding;1.31631951375345e-07!GO:0003779;actin binding;1.36099074500552e-07!GO:0006464;protein modification process;1.66279654376924e-07!GO:0044451;nucleoplasm part;1.84661332143816e-07!GO:0015986;ATP synthesis coupled proton transport;2.11670423764011e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.11670423764011e-07!GO:0007264;small GTPase mediated signal transduction;2.24086838526759e-07!GO:0031252;leading edge;2.7326236204963e-07!GO:0051179;localization;3.01534210619943e-07!GO:0030135;coated vesicle;3.13765365926976e-07!GO:0043285;biopolymer catabolic process;3.61746856162768e-07!GO:0005761;mitochondrial ribosome;3.61896860144948e-07!GO:0000313;organellar ribosome;3.61896860144948e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.78184273607708e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.65106190565151e-07!GO:0015630;microtubule cytoskeleton;4.69369929544907e-07!GO:0031965;nuclear membrane;5.49436176752218e-07!GO:0005635;nuclear envelope;5.68621911106619e-07!GO:0048475;coated membrane;5.86641843175342e-07!GO:0030117;membrane coat;5.86641843175342e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.95030321937175e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.95030321937175e-07!GO:0010467;gene expression;5.98003344125205e-07!GO:0046034;ATP metabolic process;6.59776910980003e-07!GO:0006913;nucleocytoplasmic transport;6.77547894688883e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.11219914056063e-07!GO:0005525;GTP binding;7.13179857845904e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.26025913765311e-07!GO:0009141;nucleoside triphosphate metabolic process;7.92791820906051e-07!GO:0015629;actin cytoskeleton;9.37020919728613e-07!GO:0045045;secretory pathway;9.92176337463488e-07!GO:0009060;aerobic respiration;9.92176337463488e-07!GO:0009150;purine ribonucleotide metabolic process;1.02113239087008e-06!GO:0044248;cellular catabolic process;1.02766167170233e-06!GO:0048471;perinuclear region of cytoplasm;1.10574436838872e-06!GO:0051169;nuclear transport;1.12933231748761e-06!GO:0005768;endosome;1.15440861543935e-06!GO:0017076;purine nucleotide binding;1.18963039323002e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;1.26747220710118e-06!GO:0000375;RNA splicing, via transesterification reactions;1.26747220710118e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.26747220710118e-06!GO:0009057;macromolecule catabolic process;1.30333690851e-06!GO:0005793;ER-Golgi intermediate compartment;1.50287736910385e-06!GO:0015631;tubulin binding;1.67389646528145e-06!GO:0030120;vesicle coat;1.67687667748704e-06!GO:0030662;coated vesicle membrane;1.67687667748704e-06!GO:0006163;purine nucleotide metabolic process;1.67687667748704e-06!GO:0043687;post-translational protein modification;1.68399848518753e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.69647988432602e-06!GO:0000139;Golgi membrane;1.71648891938438e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.04514973726161e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.08715469621416e-06!GO:0006793;phosphorus metabolic process;2.21608024109603e-06!GO:0006796;phosphate metabolic process;2.21608024109603e-06!GO:0005789;endoplasmic reticulum membrane;2.31866991978149e-06!GO:0008639;small protein conjugating enzyme activity;2.41306575814761e-06!GO:0045333;cellular respiration;2.72420099973331e-06!GO:0006446;regulation of translational initiation;2.86427262727285e-06!GO:0045786;negative regulation of progression through cell cycle;3.17957059020606e-06!GO:0004842;ubiquitin-protein ligase activity;3.25383773669575e-06!GO:0005905;coated pit;3.43404559103877e-06!GO:0006810;transport;3.52275553418507e-06!GO:0009259;ribonucleotide metabolic process;3.75699986752212e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.966361018867e-06!GO:0003743;translation initiation factor activity;5.44809821246727e-06!GO:0006897;endocytosis;5.45376882213279e-06!GO:0010324;membrane invagination;5.45376882213279e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.5980731678685e-06!GO:0009055;electron carrier activity;8.21843297662862e-06!GO:0006099;tricarboxylic acid cycle;8.50192248013354e-06!GO:0046356;acetyl-CoA catabolic process;8.50192248013354e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.67718501028368e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.67718501028368e-06!GO:0032561;guanyl ribonucleotide binding;1.01247128106053e-05!GO:0019001;guanyl nucleotide binding;1.01247128106053e-05!GO:0006754;ATP biosynthetic process;1.0625937147757e-05!GO:0006753;nucleoside phosphate metabolic process;1.0625937147757e-05!GO:0017038;protein import;1.1169271455668e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.13864192774086e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.13864192774086e-05!GO:0019787;small conjugating protein ligase activity;1.19292256649911e-05!GO:0045259;proton-transporting ATP synthase complex;1.25481340793385e-05!GO:0005083;small GTPase regulator activity;1.28912221445634e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.36205283909556e-05!GO:0009109;coenzyme catabolic process;1.59914724215183e-05!GO:0006333;chromatin assembly or disassembly;1.63944575506226e-05!GO:0005798;Golgi-associated vesicle;1.93314886020435e-05!GO:0006323;DNA packaging;2.00119904139679e-05!GO:0006164;purine nucleotide biosynthetic process;2.16989126659789e-05!GO:0030695;GTPase regulator activity;2.38360237217591e-05!GO:0008287;protein serine/threonine phosphatase complex;2.42908219186603e-05!GO:0006413;translational initiation;3.21315893093651e-05!GO:0008361;regulation of cell size;3.55408049994519e-05!GO:0006732;coenzyme metabolic process;3.69531136351129e-05!GO:0005874;microtubule;4.33667370934046e-05!GO:0006084;acetyl-CoA metabolic process;4.39524679220559e-05!GO:0003712;transcription cofactor activity;4.78560415018382e-05!GO:0016604;nuclear body;4.83227719702477e-05!GO:0016049;cell growth;5.03130856755046e-05!GO:0051187;cofactor catabolic process;5.38372545229997e-05!GO:0005769;early endosome;5.85367706845171e-05!GO:0051128;regulation of cellular component organization and biogenesis;6.07154843710955e-05!GO:0044453;nuclear membrane part;6.29439836307755e-05!GO:0051234;establishment of localization;6.42633561466404e-05!GO:0006888;ER to Golgi vesicle-mediated transport;6.51882517374646e-05!GO:0009056;catabolic process;6.53065086350797e-05!GO:0009260;ribonucleotide biosynthetic process;7.62628014861477e-05!GO:0007049;cell cycle;8.55143867127283e-05!GO:0005581;collagen;8.80540616740656e-05!GO:0016607;nuclear speck;8.8728358045358e-05!GO:0005856;cytoskeleton;9.06417516801994e-05!GO:0016881;acid-amino acid ligase activity;0.000101509987799365!GO:0019899;enzyme binding;0.000105509841767558!GO:0030027;lamellipodium;0.000106467482940381!GO:0016126;sterol biosynthetic process;0.000121053508051245!GO:0005770;late endosome;0.000121855853712137!GO:0016564;transcription repressor activity;0.000126573803363243!GO:0022890;inorganic cation transmembrane transporter activity;0.000131817169651192!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00016208426395469!GO:0006613;cotranslational protein targeting to membrane;0.000178245457997698!GO:0016310;phosphorylation;0.00018304691260547!GO:0006259;DNA metabolic process;0.000184185709011385!GO:0032940;secretion by cell;0.00019720093934014!GO:0005788;endoplasmic reticulum lumen;0.000211489870725863!GO:0006606;protein import into nucleus;0.000230183293609257!GO:0008654;phospholipid biosynthetic process;0.000230724251933393!GO:0051246;regulation of protein metabolic process;0.000265855882723827!GO:0065004;protein-DNA complex assembly;0.000269272035523033!GO:0008017;microtubule binding;0.000288490620571058!GO:0006334;nucleosome assembly;0.000299449797356781!GO:0051726;regulation of cell cycle;0.00031662287844803!GO:0006366;transcription from RNA polymerase II promoter;0.000317667117708819!GO:0022008;neurogenesis;0.000320322438754533!GO:0030133;transport vesicle;0.000323417959627156!GO:0016879;ligase activity, forming carbon-nitrogen bonds;0.00032910418592629!GO:0051170;nuclear import;0.000339302986298668!GO:0000074;regulation of progression through cell cycle;0.000355130418088644!GO:0000159;protein phosphatase type 2A complex;0.000386783775641385!GO:0032559;adenyl ribonucleotide binding;0.000421079530497248!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000421115734458749!GO:0015399;primary active transmembrane transporter activity;0.000421115734458749!GO:0030867;rough endoplasmic reticulum membrane;0.000507999898977063!GO:0007265;Ras protein signal transduction;0.000533311526064871!GO:0015980;energy derivation by oxidation of organic compounds;0.000559526947071029!GO:0007272;ensheathment of neurons;0.000595205848720823!GO:0008366;axon ensheathment;0.000595205848720823!GO:0005791;rough endoplasmic reticulum;0.000603256642213125!GO:0000245;spliceosome assembly;0.000603256642213125!GO:0030532;small nuclear ribonucleoprotein complex;0.000607559489434733!GO:0005524;ATP binding;0.000607559489434733!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000642210144501406!GO:0044440;endosomal part;0.000642210144501406!GO:0010008;endosome membrane;0.000642210144501406!GO:0048699;generation of neurons;0.000643634438480703!GO:0005773;vacuole;0.000665866065062302!GO:0044420;extracellular matrix part;0.000669205004046737!GO:0042623;ATPase activity, coupled;0.000683138792321308!GO:0005643;nuclear pore;0.000705186276113951!GO:0031497;chromatin assembly;0.000737718359646586!GO:0051276;chromosome organization and biogenesis;0.000748774947698767!GO:0048468;cell development;0.000749260487385034!GO:0001558;regulation of cell growth;0.000750506787516976!GO:0030136;clathrin-coated vesicle;0.00075439138216284!GO:0050767;regulation of neurogenesis;0.000762040684381149!GO:0016887;ATPase activity;0.000808871306529142!GO:0008610;lipid biosynthetic process;0.000889179984749881!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00090320066873968!GO:0050789;regulation of biological process;0.000912388134914348!GO:0030030;cell projection organization and biogenesis;0.000915429921908735!GO:0048858;cell projection morphogenesis;0.000915429921908735!GO:0032990;cell part morphogenesis;0.000915429921908735!GO:0032446;protein modification by small protein conjugation;0.000924327032994573!GO:0043623;cellular protein complex assembly;0.00095153254367286!GO:0003729;mRNA binding;0.000954673056972573!GO:0030865;cortical cytoskeleton organization and biogenesis;0.000960635029065979!GO:0012506;vesicle membrane;0.000960635029065979!GO:0005583;fibrillar collagen;0.000970478306884611!GO:0009117;nucleotide metabolic process;0.000989166788825705!GO:0009892;negative regulation of metabolic process;0.00101979807707921!GO:0031901;early endosome membrane;0.00107762166001145!GO:0030118;clathrin coat;0.00107762166001145!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00113190268374097!GO:0006916;anti-apoptosis;0.00113603412609583!GO:0005938;cell cortex;0.00119140742190391!GO:0008601;protein phosphatase type 2A regulator activity;0.00120678006179104!GO:0019717;synaptosome;0.00124185778628953!GO:0005730;nucleolus;0.00124185778628953!GO:0030182;neuron differentiation;0.00127459845658!GO:0008154;actin polymerization and/or depolymerization;0.00132787965411718!GO:0001508;regulation of action potential;0.00139954489894169!GO:0008047;enzyme activator activity;0.00141006868542851!GO:0001726;ruffle;0.00141006868542851!GO:0046467;membrane lipid biosynthetic process;0.00141006868542851!GO:0006403;RNA localization;0.00142277205331646!GO:0008250;oligosaccharyl transferase complex;0.0014281317256907!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00142931098566618!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00142931098566618!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00142931098566618!GO:0043566;structure-specific DNA binding;0.00147154568182909!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00152682542794597!GO:0005839;proteasome core complex (sensu Eukaryota);0.00153700951765315!GO:0044433;cytoplasmic vesicle part;0.00153764841242166!GO:0016567;protein ubiquitination;0.00158754638240934!GO:0006752;group transfer coenzyme metabolic process;0.00166404390000445!GO:0016481;negative regulation of transcription;0.00167942943998901!GO:0003714;transcription corepressor activity;0.00167942943998901!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0016999810274264!GO:0043069;negative regulation of programmed cell death;0.00176576539654048!GO:0043492;ATPase activity, coupled to movement of substances;0.00176580105975108!GO:0050657;nucleic acid transport;0.00178944995669304!GO:0051236;establishment of RNA localization;0.00178944995669304!GO:0050658;RNA transport;0.00178944995669304!GO:0019208;phosphatase regulator activity;0.00183209813414812!GO:0000151;ubiquitin ligase complex;0.00198191018023534!GO:0043066;negative regulation of apoptosis;0.00198191018023534!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00198957876176733!GO:0030659;cytoplasmic vesicle membrane;0.00217570459085292!GO:0043209;myelin sheath;0.00217570459085292!GO:0051188;cofactor biosynthetic process;0.00222667329850881!GO:0051920;peroxiredoxin activity;0.00222667329850881!GO:0005875;microtubule associated complex;0.00222667329850881!GO:0016311;dephosphorylation;0.00224783128022998!GO:0043005;neuron projection;0.00226317054958634!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00233443084290438!GO:0030554;adenyl nucleotide binding;0.00233553249901427!GO:0004576;oligosaccharyl transferase activity;0.0024421596699265!GO:0012501;programmed cell death;0.00245004215791634!GO:0003697;single-stranded DNA binding;0.00253613195748814!GO:0007017;microtubule-based process;0.00254708065487569!GO:0006695;cholesterol biosynthetic process;0.00259040103685149!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00262190481597118!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00265612604822463!GO:0016197;endosome transport;0.00265683511047449!GO:0008219;cell death;0.00275103287343006!GO:0016265;death;0.00275103287343006!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00286723321294756!GO:0006915;apoptosis;0.00294697532215979!GO:0004721;phosphoprotein phosphatase activity;0.00313647567669957!GO:0001725;stress fiber;0.00313964638072409!GO:0032432;actin filament bundle;0.00313964638072409!GO:0031324;negative regulation of cellular metabolic process;0.00328174383247655!GO:0050839;cell adhesion molecule binding;0.00330889269087944!GO:0031968;organelle outer membrane;0.00332993666704558!GO:0005741;mitochondrial outer membrane;0.00332993666704558!GO:0016859;cis-trans isomerase activity;0.00334423054886062!GO:0030137;COPI-coated vesicle;0.00349189180635808!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00375263353584779!GO:0008286;insulin receptor signaling pathway;0.0038060908227656!GO:0019867;outer membrane;0.0038060908227656!GO:0007019;microtubule depolymerization;0.00382945121427504!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00395759530128367!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00395836789231119!GO:0000323;lytic vacuole;0.00400127608346266!GO:0005764;lysosome;0.00400127608346266!GO:0006414;translational elongation;0.00400127608346266!GO:0042802;identical protein binding;0.0043088702571862!GO:0065002;intracellular protein transport across a membrane;0.0043320131746325!GO:0005048;signal sequence binding;0.00434171754876214!GO:0040008;regulation of growth;0.00435582726370241!GO:0005096;GTPase activator activity;0.00453309862356839!GO:0000785;chromatin;0.0045349765639817!GO:0005762;mitochondrial large ribosomal subunit;0.00464507071151122!GO:0000315;organellar large ribosomal subunit;0.00464507071151122!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00473163212259949!GO:0007266;Rho protein signal transduction;0.00473260345383622!GO:0022402;cell cycle process;0.00480231871306199!GO:0045892;negative regulation of transcription, DNA-dependent;0.00484375478155654!GO:0051674;localization of cell;0.00484375478155654!GO:0006928;cell motility;0.00484375478155654!GO:0051789;response to protein stimulus;0.00512162543560089!GO:0006986;response to unfolded protein;0.00512162543560089!GO:0006643;membrane lipid metabolic process;0.00521599329784709!GO:0019888;protein phosphatase regulator activity;0.0055095262600836!GO:0044448;cell cortex part;0.0055095262600836!GO:0051427;hormone receptor binding;0.00562820048434424!GO:0005885;Arp2/3 protein complex;0.00594952576871745!GO:0006612;protein targeting to membrane;0.00617425056513978!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00629410709188377!GO:0004812;aminoacyl-tRNA ligase activity;0.00629410709188377!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00629410709188377!GO:0030132;clathrin coat of coated pit;0.00630991646628138!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00667320143848333!GO:0005100;Rho GTPase activator activity;0.00679481328226681!GO:0004722;protein serine/threonine phosphatase activity;0.00694260474172506!GO:0030660;Golgi-associated vesicle membrane;0.00701468297052256!GO:0030663;COPI coated vesicle membrane;0.00721146026893663!GO:0030126;COPI vesicle coat;0.00721146026893663!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00724785179077863!GO:0019902;phosphatase binding;0.00728088367654254!GO:0051287;NAD binding;0.00737864967890787!GO:0016050;vesicle organization and biogenesis;0.00756246018760897!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00760755840774746!GO:0004298;threonine endopeptidase activity;0.00762843624448301!GO:0051261;protein depolymerization;0.00814221609202445!GO:0016791;phosphoric monoester hydrolase activity;0.00816659011506203!GO:0007050;cell cycle arrest;0.00831985381852698!GO:0006470;protein amino acid dephosphorylation;0.00832853073607348!GO:0030658;transport vesicle membrane;0.00851418519752834!GO:0048487;beta-tubulin binding;0.00872609187075194!GO:0033116;ER-Golgi intermediate compartment membrane;0.00888445847151783!GO:0050794;regulation of cellular process;0.0088919287776951!GO:0045296;cadherin binding;0.00894940235191705!GO:0005813;centrosome;0.00915416812733337!GO:0035257;nuclear hormone receptor binding;0.00932605060706415!GO:0043488;regulation of mRNA stability;0.00938088465041965!GO:0043487;regulation of RNA stability;0.00938088465041965!GO:0048167;regulation of synaptic plasticity;0.00938091603046453!GO:0016568;chromatin modification;0.00947958068809339!GO:0005869;dynactin complex;0.00961572532081749!GO:0008139;nuclear localization sequence binding;0.00997150018629423!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.00997150018629423!GO:0050811;GABA receptor binding;0.0105349574155567!GO:0009966;regulation of signal transduction;0.010898327126154!GO:0016584;nucleosome positioning;0.0110097414053551!GO:0051028;mRNA transport;0.0111767050568976!GO:0031114;regulation of microtubule depolymerization;0.0112086066721712!GO:0007026;negative regulation of microtubule depolymerization;0.0112086066721712!GO:0006607;NLS-bearing substrate import into nucleus;0.0119611748857444!GO:0006650;glycerophospholipid metabolic process;0.0121668155641806!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0125549482733094!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0125549482733094!GO:0019904;protein domain specific binding;0.0127182183695588!GO:0043038;amino acid activation;0.012927171980688!GO:0006418;tRNA aminoacylation for protein translation;0.012927171980688!GO:0043039;tRNA aminoacylation;0.012927171980688!GO:0006402;mRNA catabolic process;0.013096476366552!GO:0000904;cellular morphogenesis during differentiation;0.0132603159366732!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0132603159366732!GO:0004667;prostaglandin-D synthase activity;0.0132603159366732!GO:0050802;circadian sleep/wake cycle, sleep;0.0132603159366732!GO:0022410;circadian sleep/wake cycle process;0.0132603159366732!GO:0042749;regulation of circadian sleep/wake cycle;0.0132603159366732!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0137905321376188!GO:0015002;heme-copper terminal oxidase activity;0.0137905321376188!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0137905321376188!GO:0004129;cytochrome-c oxidase activity;0.0137905321376188!GO:0006891;intra-Golgi vesicle-mediated transport;0.0138553165589439!GO:0009165;nucleotide biosynthetic process;0.0147080254189093!GO:0031175;neurite development;0.0147262349488597!GO:0005912;adherens junction;0.0148456367972862!GO:0048667;neuron morphogenesis during differentiation;0.0150851419717185!GO:0048812;neurite morphogenesis;0.0150851419717185!GO:0050803;regulation of synapse structure and activity;0.0151270491605302!GO:0007242;intracellular signaling cascade;0.0164793915826247!GO:0001666;response to hypoxia;0.0169157268928787!GO:0005815;microtubule organizing center;0.0169603775141025!GO:0048666;neuron development;0.0169603775141025!GO:0046930;pore complex;0.0169603775141025!GO:0030041;actin filament polymerization;0.0170587395194133!GO:0031072;heat shock protein binding;0.0171306234986874!GO:0030426;growth cone;0.0171693061738123!GO:0000314;organellar small ribosomal subunit;0.0172815890421503!GO:0005763;mitochondrial small ribosomal subunit;0.0172815890421503!GO:0051087;chaperone binding;0.0177138781232651!GO:0006672;ceramide metabolic process;0.0177138781232651!GO:0007005;mitochondrion organization and biogenesis;0.0181393560793436!GO:0018196;peptidyl-asparagine modification;0.018541968799826!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.018541968799826!GO:0005586;collagen type III;0.0188208197385433!GO:0042552;myelination;0.0189328546417988!GO:0031109;microtubule polymerization or depolymerization;0.0193210542894548!GO:0006644;phospholipid metabolic process;0.0200052121265469!GO:0030031;cell projection biogenesis;0.020807621421063!GO:0030427;site of polarized growth;0.0209776296343474!GO:0000059;protein import into nucleus, docking;0.0211529603976282!GO:0043284;biopolymer biosynthetic process;0.0212967521593871!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0212967521593871!GO:0033043;regulation of organelle organization and biogenesis;0.0212967521593871!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0215031326490735!GO:0006595;polyamine metabolic process;0.0216701037288128!GO:0030127;COPII vesicle coat;0.0217708304840352!GO:0012507;ER to Golgi transport vesicle membrane;0.0217708304840352!GO:0003746;translation elongation factor activity;0.0220210773800049!GO:0006892;post-Golgi vesicle-mediated transport;0.0220210773800049!GO:0003713;transcription coactivator activity;0.0220537646123062!GO:0030176;integral to endoplasmic reticulum membrane;0.0225656201682233!GO:0030125;clathrin vesicle coat;0.0235028928789357!GO:0030665;clathrin coated vesicle membrane;0.0235028928789357!GO:0048500;signal recognition particle;0.0236926408789194!GO:0043021;ribonucleoprotein binding;0.0238056714013836!GO:0016408;C-acyltransferase activity;0.0242460193298257!GO:0035035;histone acetyltransferase binding;0.0250298112433678!GO:0051270;regulation of cell motility;0.0253408726625511!GO:0009108;coenzyme biosynthetic process;0.0260046784555737!GO:0046474;glycerophospholipid biosynthetic process;0.0265683942150599!GO:0046519;sphingoid metabolic process;0.0268045897930032!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.0268480811082528!GO:0005092;GDP-dissociation inhibitor activity;0.0269607139948626!GO:0043681;protein import into mitochondrion;0.0271962768180452!GO:0051168;nuclear export;0.0274778628820497!GO:0042585;germinal vesicle;0.0277065619147067!GO:0051252;regulation of RNA metabolic process;0.0280535493157565!GO:0033673;negative regulation of kinase activity;0.028116229961101!GO:0006469;negative regulation of protein kinase activity;0.028116229961101!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0286045107477557!GO:0022610;biological adhesion;0.0288445275470297!GO:0007155;cell adhesion;0.0288445275470297!GO:0008147;structural constituent of bone;0.0292060583969193!GO:0050435;beta-amyloid metabolic process;0.029316737697574!GO:0008090;retrograde axon cargo transport;0.0301210250323818!GO:0033596;TSC1-TSC2 complex;0.0301210250323818!GO:0033693;neurofilament bundle assembly;0.0301210250323818!GO:0044262;cellular carbohydrate metabolic process;0.0308651710994425!GO:0022406;membrane docking;0.0308651710994425!GO:0048278;vesicle docking;0.0308651710994425!GO:0019911;structural constituent of myelin sheath;0.0311748273054645!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0312376800629065!GO:0005883;neurofilament;0.0318554156730063!GO:0060053;neurofilament cytoskeleton;0.0318554156730063!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0323458079758374!GO:0055083;monovalent inorganic anion homeostasis;0.0323458079758374!GO:0055064;chloride ion homeostasis;0.0323458079758374!GO:0030644;cellular chloride ion homeostasis;0.0323458079758374!GO:0030199;collagen fibril organization;0.0327171996746569!GO:0004113;2',3'-cyclic-nucleotide 3'-phosphodiesterase activity;0.0335594982095943!GO:0009214;cyclic nucleotide catabolic process;0.0335594982095943!GO:0044255;cellular lipid metabolic process;0.0337056539200505!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0340845189686756!GO:0045047;protein targeting to ER;0.0340845189686756!GO:0006665;sphingolipid metabolic process;0.0351886427247133!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0354664264125432!GO:0017166;vinculin binding;0.0358712350920543!GO:0006979;response to oxidative stress;0.0359505561304797!GO:0006509;membrane protein ectodomain proteolysis;0.0362593480260075!GO:0033619;membrane protein proteolysis;0.0362593480260075!GO:0031902;late endosome membrane;0.0362660684382751!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0363439197447378!GO:0030424;axon;0.0364913572068183!GO:0003711;transcription elongation regulator activity;0.0364913572068183!GO:0050749;apolipoprotein E receptor binding;0.0367885266802616!GO:0007167;enzyme linked receptor protein signaling pathway;0.0376223298169737!GO:0005667;transcription factor complex;0.0376288823162618!GO:0005868;cytoplasmic dynein complex;0.0377804232538143!GO:0051056;regulation of small GTPase mediated signal transduction;0.0380004268772663!GO:0006904;vesicle docking during exocytosis;0.0380004268772663!GO:0051348;negative regulation of transferase activity;0.038057463504078!GO:0001578;microtubule bundle formation;0.0386304812624058!GO:0005801;cis-Golgi network;0.0386550351480787!GO:0007409;axonogenesis;0.0392797110263066!GO:0019903;protein phosphatase binding;0.0396864319477931!GO:0007160;cell-matrix adhesion;0.0396864319477931!GO:0031628;opioid receptor binding;0.0397535208759572!GO:0031852;mu-type opioid receptor binding;0.0397535208759572!GO:0030134;ER to Golgi transport vesicle;0.0397574030337957!GO:0031589;cell-substrate adhesion;0.0397621500144004!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0403850176093549!GO:0016563;transcription activator activity;0.0403850176093549!GO:0050770;regulation of axonogenesis;0.0404125873447339!GO:0019843;rRNA binding;0.0407938838734582!GO:0007006;mitochondrial membrane organization and biogenesis;0.0407938838734582!GO:0030832;regulation of actin filament length;0.0410061317179532!GO:0007219;Notch signaling pathway;0.0413164116035057!GO:0030911;TPR domain binding;0.0413586378539461!GO:0030742;GTP-dependent protein binding;0.0413915849263544!GO:0032535;regulation of cellular component size;0.041777536582042!GO:0001540;beta-amyloid binding;0.0419427693006763!GO:0006818;hydrogen transport;0.0428418004368851!GO:0040012;regulation of locomotion;0.044986522318177!GO:0008312;7S RNA binding;0.045055578932058!GO:0009081;branched chain family amino acid metabolic process;0.0452907428102147!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0457518837876696!GO:0003690;double-stranded DNA binding;0.047344649195751!GO:0016853;isomerase activity;0.0490368781482543!GO:0031371;ubiquitin conjugating enzyme complex;0.04947060879162!GO:0016272;prefoldin complex;0.0496478930058031!GO:0040011;locomotion;0.0498419488071117
 |sample_id=10056
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=spinal cord
 |top_motifs=DBP:3.27666669141;HOX{A6,A7,B6,B7}:3.22968181235;SOX5:3.21700716068;MED-1{core}:3.08004502252;MYFfamily:2.99559536473;SOX{8,9,10}:2.9389146543;ZNF384:2.90718811361;ZFP161:2.86970101784;GCM1,2:2.8541300097;HIC1:2.83552128453;MTE{core}:2.81006705045;SOX2:2.79441076449;REST:2.78933841281;MAZ:2.7855792436;NHLH1,2:2.78255763796;TFAP2B:2.77825821858;EGR1..3:2.70768012595;RBPJ:2.7014654955;SMAD1..7,9:2.62846300441;MZF1:2.59083022703;MYBL2:2.58759069;BREu{core}:2.48803468913;MTF1:2.4869358331;GTF2I:2.45017094112;SPZ1:2.42807567858;EP300:2.41824965675;GATA4:2.3898228692;KLF4:2.34158988803;PATZ1:2.31466650156;PAX5:2.30772834289;GFI1B:2.29926266417;POU5F1:2.26577272352;ZBTB6:2.25223624192;FOXP1:2.17158100055;RREB1:2.16685080508;FOXM1:2.1462819294;SOX17:2.1449783122;PRDM1:2.1277577898;RFX1:2.11683668164;CUX2:2.0794811963;ZIC1..3:2.07795846851;ZNF423:2.03121661395;NFIX:1.95381552367;PRRX1,2:1.88495267553;NKX2-3_NKX2-5:1.83925582572;EBF1:1.82720655485;LMO2:1.82369786999;NKX3-2:1.79487015609;TGIF1:1.79418956157;TOPORS:1.72808955215;TFAP2{A,C}:1.66486181466;XBP1:1.63105416387;ATF2:1.6247726618;TFDP1:1.54538307191;LEF1_TCF7_TCF7L1,2:1.48082770803;SP1:1.47878110179;TLX1..3_NFIC{dimer}:1.41368781977;ONECUT1,2:1.41183136739;IKZF2:1.40332007012;OCT4_SOX2{dimer}:1.40141695462;ESR1:1.39530665145;HOX{A4,D4}:1.37888049761;FOXD3:1.37572018799;TAL1_TCF{3,4,12}:1.37517771426;TBP:1.36174259826;POU3F1..4:1.30588843229;GLI1..3:1.28752391394;JUN:1.23439897841;GTF2A1,2:1.23177148146;HBP1_HMGB_SSRP1_UBTF:1.21006460023;FOXL1:1.19301090274;VSX1,2:1.15600797886;POU6F1:1.14428147725;NKX6-1,2:1.1306534054;PAX6:1.10089356641;BPTF:1.07738595271;ADNP_IRX_SIX_ZHX:1.05110900337;FOXP3:1.03723990837;GFI1:1.03175928322;HMGA1,2:1.02193100737;NR6A1:1.01190589484;POU1F1:1.00730715702;ALX1:0.980750289385;RFX2..5_RFXANK_RFXAP:0.958429757986;NANOG:0.918476776634;MAFB:0.901977763524;IKZF1:0.897618908615;XCPE1{core}:0.871354972585;FOXQ1:0.862569764455;AHR_ARNT_ARNT2:0.831699121505;HOXA9_MEIS1:0.822713939418;CDC5L:0.809777021286;LHX3,4:0.761830870879;NKX2-1,4:0.743510056248;FOX{I1,J2}:0.696484968179;NR5A1,2:0.681116351795;NR3C1:0.680796138914;MEF2{A,B,C,D}:0.643154665241;RORA:0.613882145984;ZNF238:0.604292913526;UFEwm:0.565062446822;NRF1:0.521150125461;GZF1:0.501895495381;NFY{A,B,C}:0.47173208943;T:0.467325282016;AIRE:0.461201137574;FOX{F1,F2,J1}:0.395201728825;ZNF143:0.379444283067;TFCP2:0.357010650747;NFATC1..3:0.356861737743;GATA6:0.310686900065;TEAD1:0.300130547712;TEF:0.216838808892;PBX1:0.202882630887;HMX1:0.181677042143;STAT2,4,6:0.178524423968;YY1:0.172724700952;NR1H4:0.154820674959;TFAP4:0.144918323238;ARID5B:0.131299213327;RXR{A,B,G}:0.101047882969;NKX3-1:0.0886125158971;PAX4:0.0870594148309;CREB1:0.0504140384261;DMAP1_NCOR{1,2}_SMARC:0.0439475489288;ALX4:0.0403291349071;SRF:0.0339489348668;TBX4,5:-0.045108296622;IRF7:-0.0518436103466;FOXA2:-0.0708415538115;PAX2:-0.0709347277481;MYOD1:-0.0769210630887;NANOG{mouse}:-0.0780891272131;ZEB1:-0.092043756126;STAT1,3:-0.0960920312849;FOXO1,3,4:-0.12345742785;HNF4A_NR2F1,2:-0.126339505925;CDX1,2,4:-0.128837360915;AR:-0.129081826262;PDX1:-0.155336051286;PITX1..3:-0.160371983766;SREBF1,2:-0.171814497845;PAX3,7:-0.173699626517;FOXN1:-0.184670197639;TLX2:-0.191839879665;PAX1,9:-0.203969383567;EVI1:-0.223155170691;NFIL3:-0.236363339644;IRF1,2:-0.26521221592;ATF4:-0.283479152508;HNF1A:-0.288922043305;ATF6:-0.299304985895;ZNF148:-0.314017204726;FOX{D1,D2}:-0.342299592057;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.403314563813;CRX:-0.428381109971;HAND1,2:-0.45629433418;ATF5_CREB3:-0.462369838223;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.477768907382;HSF1,2:-0.488587554824;RXRA_VDR{dimer}:-0.51772401976;ZBTB16:-0.545749509653;NFE2L2:-0.58464639309;SNAI1..3:-0.594514366347;E2F1..5:-0.630950517734;SPIB:-0.710048245681;ESRRA:-0.745294181636;SPI1:-0.758748426459;TP53:-0.822303978078;ETS1,2:-0.845100662268;NFKB1_REL_RELA:-0.859079568641;bHLH_family:-0.897876945803;RUNX1..3:-0.952343946763;PAX8:-0.954438431545;PPARG:-0.978570946813;HIF1A:-1.01548145879;CEBPA,B_DDIT3:-1.13190443375;NFE2L1:-1.13406588058;FOSL2:-1.1432561121;FOS_FOS{B,L1}_JUN{B,D}:-1.17807081128;BACH2:-1.19754208897;HLF:-1.27927804649;NFE2:-1.29347026188;HOX{A5,B5}:-1.32064583411;EN1,2:-1.43846177629;ELK1,4_GABP{A,B1}:-1.46541764985;POU2F1..3:-1.59920897497;NKX2-2,8:-1.60265523196;MYB:-1.60824194335;ELF1,2,4:-1.62439964759;HES1:-1.79624053888;STAT5{A,B}:-3.08068458381
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10056-101H2;search_select_hide=table117:FF:10056-101H2
 }}

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FF:10056-101H2: Difference between revisions

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Latest revision as of 12:18, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0