FFCP PHASE1:Hg19::chr10:123324686..123324691,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:123324686..123324691,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr10:123324686..123324691,- | |description=CAGE_peak_at_chr10:123324686..123324691,- | ||
|id=chr10:123324686..123324691,- | |id=chr10:123324686..123324691,- | ||
|ontology_enrichment_celltype=CL:0000039!6.90e-07!7;CL:0000586!6.90e-07!7 | |ontology_enrichment_celltype=CL:0000039!6.90e-07!7;CL:0000586!6.90e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.82e-07;3!CL:0000182;5.63e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.82e-07,3;CL:0000182,5.64e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.59e-29!57;UBERON:0005068!1.59e-29!57;UBERON:0006241!1.59e-29!57;UBERON:0007135!1.59e-29!57;UBERON:0001017!3.92e-28!82;UBERON:0005743!1.09e-27!86;UBERON:0007023!2.05e-26!115;UBERON:0000073!8.31e-25!94;UBERON:0001016!8.31e-25!94;UBERON:0000955!4.72e-23!69;UBERON:0006238!4.72e-23!69;UBERON:0002616!1.10e-22!59;UBERON:0003075!3.71e-22!86;UBERON:0007284!3.71e-22!86;UBERON:0002020!7.27e-22!34;UBERON:0003528!7.27e-22!34;UBERON:0002346!7.53e-22!90;UBERON:0002780!8.96e-22!41;UBERON:0001890!8.96e-22!41;UBERON:0006240!8.96e-22!41;UBERON:0001893!1.96e-21!34;UBERON:0003080!4.76e-21!42;UBERON:0002791!1.42e-20!33;UBERON:0001869!9.19e-19!32;UBERON:0000924!1.38e-15!173;UBERON:0006601!1.38e-15!173;UBERON:0004121!1.63e-15!169;UBERON:0003056!2.81e-15!61;UBERON:0000153!9.76e-15!129;UBERON:0007811!9.76e-15!129;UBERON:0000033!1.66e-14!123;UBERON:0000956!5.10e-13!25;UBERON:0000203!5.10e-13!25;UBERON:0002619!9.44e-12!22;UBERON:0001950!1.17e-11!20;UBERON:0002308!3.26e-11!9;UBERON:0000125!3.26e-11!9;UBERON:0002298!3.05e-10!8;UBERON:0003076!1.29e-09!15;UBERON:0003057!1.29e-09!15;UBERON:0009663!2.87e-08!7;UBERON:0002420!3.75e-08!9;UBERON:0007245!3.75e-08!9;UBERON:0010009!3.75e-08!9;UBERON:0010011!3.75e-08!9;UBERON:0000454!3.75e-08!9;UBERON:0000062!6.20e-08!511;UBERON:0000064!3.03e-07!219;UBERON:0000369!8.19e-07!4;UBERON:0002435!8.19e-07!4;UBERON:0000204!8.19e-07!4;UBERON:0010082!8.19e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.30e-19;1!UBERON:0009661;1.30e-19;1!UBERON:0002950;1.30e-19;1!UBERON:0001891;1.30e-19;1!UBERON:0002336;3.25e-19;1!UBERON:0001874;3.25e-19;1!UBERON:0011215;3.25e-19;1!UBERON:0001018;3.25e-19;1!UBERON:0002473;3.25e-19;1!UBERON:0005340;3.25e-19;1!UBERON:0003544;3.25e-19;1!UBERON:0005970;3.25e-19;1!UBERON:0002316;3.25e-19;1!UBERON:0001020;3.25e-19;1!UBERON:0002437;3.25e-19;1!UBERON:0000125;1.17e-18;9!UBERON:0002308;1.17e-18;9!UBERON:0009663;2.55e-11;7!UBERON:0001897;2.72e-10;2!UBERON:0002148;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0006331;2.72e-10;2!UBERON:0009662;2.72e-10;2!UBERON:0010225;2.72e-10;2!UBERON:0002420;5.20e-09;9!UBERON:0007245;5.20e-09;9!UBERON:0010009;5.20e-09;9!UBERON:0010011;5.20e-09;9!UBERON:0000454;5.20e-09;9!UBERON:0001016;8.17e-08;83!UBERON:0000988;2.79e-07;3!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0005383;2.79e-07;3!UBERON:0001137;2.79e-07;3!UBERON:0005382;2.79e-07;3!UBERON:0000073;9.58e-07;53!UBERON:0002616;9.58e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.30e-19,1;UBERON:0009661,1.30e-19,1;UBERON:0002950,1.30e-19,1;UBERON:0001891,1.30e-19,1;UBERON:0009616,1.30e-19,1;UBERON:0010286,1.30e-19,1;UBERON:0002336,2.25e-19,1;UBERON:0011215,2.25e-19,1;UBERON:0001018,2.25e-19,1;UBERON:0002473,2.25e-19,1;UBERON:0005340,2.25e-19,1;UBERON:0003544,2.25e-19,1;UBERON:0005970,2.25e-19,1;UBERON:0002316,2.25e-19,1;UBERON:0001020,2.25e-19,1;UBERON:0002437,2.25e-19,1;UBERON:0001874,5.62e-19,1;UBERON:0000125,1.41e-18,9;UBERON:0002308,1.41e-18,9;UBERON:0009663,2.98e-11,7;UBERON:0001049,3.47e-11,56;UBERON:0005068,3.47e-11,56;UBERON:0006241,3.47e-11,56;UBERON:0007135,3.47e-11,56;UBERON:0005162,2.27e-10,2;UBERON:0000122,2.27e-10,2;UBERON:0002148,2.72e-10,2;UBERON:0006331,2.72e-10,2;UBERON:0009662,2.72e-10,2;UBERON:0001017,2.82e-10,81;UBERON:0001897,3.27e-10,2;UBERON:0010225,3.27e-10,2;UBERON:0001016,3.09e-09,89;UBERON:0000955,4.19e-09,68;UBERON:0006238,4.19e-09,68;UBERON:0002420,5.87e-09,9;UBERON:0007245,5.87e-09,9;UBERON:0010009,5.87e-09,9;UBERON:0010011,5.87e-09,9;UBERON:0000454,5.87e-09,9;UBERON:0000073,2.19e-08,53;UBERON:0002616,2.19e-08,53;UBERON:0003075,1.26e-07,82;UBERON:0007284,1.26e-07,82;UBERON:0000988,2.79e-07,3;UBERON:0002346,2.90e-07,86;UBERON:0011216,2.97e-07,223;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3;UBERON:0005383,3.35e-07,3;UBERON:0005382,3.35e-07,3;UBERON:0002780,3.65e-07,41;UBERON:0001890,3.65e-07,41;UBERON:0003080,3.65e-07,41;UBERON:0006240,3.65e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0.132529768321485,0.580969714347592,0.310983165046111,0,2.55484151353081,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0,0,0,0.307801034015188,0,0.23056390438806,0.269272933229316,0.325942115766024,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,1.28062152663286,0,0,0,0,0,0.394584402849391,0,0.91821828489147,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0.441280633457501,0.677942222341597,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0.821432273351958,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.425246896606173,0.670869375198532,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.904980694530854,1.19009341568421,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.665574309221114,0.993542447062135,1.798532254171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0.495743057036009,0,0,0,0,0,0,0.321146125482298,0,0.478901577171454,0,0.252071696221718,0.276629009856872,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.747667062745149,0.263091094251396,0,0,0.078493092850514,1.09980912941201,0,0.913158720509496,0,0,0.714765441766563,0.47404083519818,0,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0.111855431797792,7.85201868921944,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0.218559560503957,0.470317296361523,0,0,0.588925401344836,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0.458729283404541,2.43677291357467,0,0.543931921527318,0,0,0,0,0,0.126166424835079,0,0.380095503034311,0.203977659483963,0,0.459474497674225,0.250707539292375,0,0.267964130156178,0.829169439458779,1.13776295448085,0,0.23806443146374,0,0.124149428591716,0,0.190941474834495,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0.132529768321485,0.580969714347592,0.310983165046111,0,2.55484151353081,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0,0,0,0.307801034015188,0,0.23056390438806,0.269272933229316,0.325942115766024,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,1.28062152663286,0,0,0,0,0,0.394584402849391,0,0.91821828489147,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0.441280633457501,0.677942222341597,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0.821432273351958,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.425246896606173,0.670869375198532,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.904980694530854,1.19009341568421,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.665574309221114,0.993542447062135,1.798532254171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0.495743057036009,0,0,0,0,0,0,0.321146125482298,0,0.478901577171454,0,0.252071696221718,0.276629009856872,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.747667062745149,0.263091094251396,0,0,0.078493092850514,1.09980912941201,0,0.913158720509496,0,0,0.714765441766563,0.47404083519818,0,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0.111855431797792,7.85201868921944,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0.218559560503957,0.470317296361523,0,0,0.588925401344836,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0.458729283404541,2.43677291357467,0,0.543931921527318,0,0,0,0,0,0.126166424835079,0,0.380095503034311,0.203977659483963,0,0.459474497674225,0.250707539292375,0,0.267964130156178,0.829169439458779,1.13776295448085,0,0.23806443146374,0,0.124149428591716,0,0.190941474834495,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:123324686..123324691,- | |short_description=p@chr10:123324686..123324691,- | ||
}} | }} |
Latest revision as of 11:06, 23 July 2015
Short description: | p@chr10:123324686..123324691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123324686..123324691, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.82e-07 | 3 |
hepatocyte | 5.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.43e-10 | 2 |