FFCP PHASE1:Hg19::chr10:6622204..6622254,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5588 | |EntrezGene=5588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9410 | |HGNC=9410 | ||
|TSSclassifier=strong | |||
|UniProt=Q04759,Q5JUN8 | |UniProt=Q04759,Q5JUN8 | ||
|association_with_transcript=0bp_to_ENST00000397176,NM_001242413,NM_006257,uc001ijj.1,uc009xin.1,uc010qax.1_5end | |association_with_transcript=0bp_to_ENST00000397176,NM_001242413,NM_006257,uc001ijj.1,uc009xin.1,uc010qax.1_5end | ||
|cluster_id=chr10:6622204..6622254,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_PRKCQ_5end | |description=CAGE_peak_1_at_PRKCQ_5end | ||
|id=chr10:6622204..6622254,- | |id=chr10:6622204..6622254,- | ||
|ontology_enrichment_celltype=CL:0000084!4.92e-15!25;CL:0000827!4.92e-15!25;CL:0000791!4.08e-14!18;CL:0000789!4.08e-14!18;CL:0002420!4.08e-14!18;CL:0002419!4.08e-14!18;CL:0000790!4.08e-14!18;CL:0000037!2.21e-12!172;CL:0000566!2.21e-12!172;CL:0000988!2.16e-11!182;CL:0002032!6.65e-11!165;CL:0000837!6.65e-11!165;CL:0000625!3.24e-09!11;CL:0000838!5.03e-08!52;CL:0000542!1.34e-07!53;CL:0000051!1.34e-07!53 | |ontology_enrichment_celltype=CL:0000084!4.92e-15!25;CL:0000827!4.92e-15!25;CL:0000791!4.08e-14!18;CL:0000789!4.08e-14!18;CL:0002420!4.08e-14!18;CL:0002419!4.08e-14!18;CL:0000790!4.08e-14!18;CL:0000037!2.21e-12!172;CL:0000566!2.21e-12!172;CL:0000988!2.16e-11!182;CL:0002032!6.65e-11!165;CL:0000837!6.65e-11!165;CL:0000625!3.24e-09!11;CL:0000838!5.03e-08!52;CL:0000542!1.34e-07!53;CL:0000051!1.34e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.31e-18;25!CL:0000791;2.85e-17;18!CL:0000789;2.85e-17;18!CL:0002419;2.85e-17;18!CL:0000625;3.85e-11;11!CL:0000624;5.81e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.05e-18,25;CL:0000827,1.05e-18,25;CL:0000791,2.89e-17,18;CL:0000789,2.89e-17,18;CL:0002420,2.89e-17,18;CL:0002419,2.89e-17,18;CL:0000790,2.89e-17,18;CL:0000838,2.87e-11,52;CL:0000625,3.89e-11,11;CL:0000542,8.05e-11,53;CL:0000051,8.05e-11,53;CL:0000037,8.17e-09,168;CL:0000988,1.96e-08,177;CL:0002032,1.70e-07,161;CL:0000837,1.70e-07,161;CL:0000624,5.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.85e-17;18 | |||
|ontology_enrichment_disease=DOID:1240!7.40e-10!39;DOID:8692!8.42e-09!31;DOID:2531!3.28e-08!51;DOID:0060083!3.28e-08!51 | |ontology_enrichment_disease=DOID:1240!7.40e-10!39;DOID:8692!8.42e-09!31;DOID:2531!3.28e-08!51;DOID:0060083!3.28e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.33e-07;31!DOID:1240;3.15e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.15e-09,39;DOID:2531,3.05e-08,51;DOID:0060083,3.05e-08,51;DOID:8692,1.64e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-25!115;UBERON:0001049!1.00e-13!57;UBERON:0005068!1.00e-13!57;UBERON:0006241!1.00e-13!57;UBERON:0007135!1.00e-13!57;UBERON:0001893!1.75e-12!34;UBERON:0002020!2.45e-12!34;UBERON:0003528!2.45e-12!34;UBERON:0005743!3.16e-12!86;UBERON:0002791!4.54e-12!33;UBERON:0003080!1.20e-11!42;UBERON:0002780!1.57e-11!41;UBERON:0001890!1.57e-11!41;UBERON:0006240!1.57e-11!41;UBERON:0001869!1.67e-11!32;UBERON:0001017!1.99e-11!82;UBERON:0002616!3.46e-10!59;UBERON:0000073!6.85e-10!94;UBERON:0001016!6.85e-10!94;UBERON:0000178!1.61e-09!15;UBERON:0000179!1.61e-09!15;UBERON:0000463!1.61e-09!15;UBERON:0000153!5.22e-09!129;UBERON:0007811!5.22e-09!129;UBERON:0000956!6.10e-09!25;UBERON:0000203!6.10e-09!25;UBERON:0003075!7.09e-09!86;UBERON:0007284!7.09e-09!86;UBERON:0002619!9.42e-09!22;UBERON:0000955!1.54e-08!69;UBERON:0006238!1.54e-08!69;UBERON:0003056!2.01e-08!61;UBERON:0001950!4.43e-08!20;UBERON:0002346!1.37e-07!90;UBERON:0000033!5.14e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.51e-12;34!UBERON:0003528;9.42e-12;34!UBERON:0002020;9.42e-12;34!UBERON:0002791;1.67e-11;32!UBERON:0000178;1.74e-11;15!UBERON:0000179;1.74e-11;15!UBERON:0000463;1.74e-11;15!UBERON:0001869;1.80e-11;32!UBERON:0002780;1.52e-09;41!UBERON:0001890;1.52e-09;41!UBERON:0000956;2.02e-09;25!UBERON:0000203;2.02e-09;25!UBERON:0002619;5.10e-09;22!UBERON:0001950;3.20e-08;20!UBERON:0000073;1.30e-07;53!UBERON:0002616;1.30e-07;53!UBERON:0002390;3.31e-07;32!UBERON:0007023;8.58e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.97e-24,114;UBERON:0001893,8.14e-14,34;UBERON:0001049,1.07e-13,56;UBERON:0005068,1.07e-13,56;UBERON:0006241,1.07e-13,56;UBERON:0007135,1.07e-13,56;UBERON:0003528,1.22e-13,34;UBERON:0002020,1.22e-13,34;UBERON:0002780,8.20e-13,41;UBERON:0001890,8.20e-13,41;UBERON:0003080,8.20e-13,41;UBERON:0006240,8.20e-13,41;UBERON:0000073,1.13e-12,53;UBERON:0002616,1.13e-12,53;UBERON:0002791,1.20e-12,32;UBERON:0001869,1.28e-12,32;UBERON:0001017,6.88e-12,81;UBERON:0000178,1.62e-11,15;UBERON:0000179,1.62e-11,15;UBERON:0000463,1.62e-11,15;UBERON:0001016,7.30e-10,89;UBERON:0000956,1.82e-09,25;UBERON:0000203,1.82e-09,25;UBERON:0003056,3.02e-09,61;UBERON:0002619,3.58e-09,22;UBERON:0000955,7.52e-09,68;UBERON:0006238,7.52e-09,68;UBERON:0003075,8.26e-09,82;UBERON:0007284,8.26e-09,82;UBERON:0001950,2.42e-08,20;UBERON:0002346,9.12e-08,86;UBERON:0010371,1.40e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,1.14494394852423,1.36874425072884,1.25542639594803,6.1130724598361,5.50073949314637,5.11620078538915,5.11373559903575,16.8884935162774,4.64448369948228,3.67768489791571,1.8072355126695,0.369754010166788,0,0,3.81680571135301,5.53995408531877,8.02177789880567,9.33146744078163,1.56740831967947,7.12566065241755,0.77272670290256,0,0.755751887377619,0.485168122375632,0.697287110717054,0.822335776043652,0,0.575384784644301,0.768482119587302,0.709446689665756,1.03423704220986,0.645484683583826,0,0.564727018627814,0.545812300115692,0.449446968890169,1.53041946185451,1.28371610830437,0,0.329851300186716,0.797854630486527,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,1.81619850790011,1.84138817993782,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,10.5737062863221,8.40762844472304,8.42829071280246,44.2596982756124,38.5150547494181,35.1578563289161,48.818456654078,46.932806395237,34.5616898186355,46.7584148178987,38.8822494529256,36.236526619405,30.5716774525397,37.6417370633372,43.6791400264552,41.2288131764814,28.7766333056433,33.4383521520877,37.0947949740867,58.5731924490139,54.3107881022118,56.4491828546875,45.6636651071192,32.9569624497652,30.5828426479541,46.5556233315885,32.1751068467338,31.9030892389645,21.8603970223126,38.8483807220654,40.5717557359506,34.9806034346568,39.0682465872628,29.5606078891577,41.1277756178454,40.6509097590931,34.9026813357546,0,0,0,0,0,0,0,0,0.945348171640679,0,0.614843499851882,3.79839318943367,2.91436230634034,3.70784442784429,0,0.348259474598534,0.531831842075461,0.476981248610684,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.446498641420399,2.02076435363553,0.675668882899933,0,1.89853131913626,0,0,11.6334079244498,1.3082821564276,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,2.18196896472668,3.44165514466805,4.87894824518382,6.75901818439575,4.18298194330266,3.93912009058408,2.52320850875628,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,19.4243763742446,1.47586126251736,0.171567810298526,2.74375713521564,1.1240175325762,1.20634766893957,3.24059558054854,0,0,0,1.15930404975077,0,0,0,0,0,0,0,0,0,0,2.18376766658517,2.97727704209012,0.447792613514241,0.581267877027924,2.68367875415648,0.492663237895943,5.37095447480679,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2611121750032,31.3278908721064,33.4222741032252,32.3424451424966,2.54094624222463,5.20559415430487,4.63973287666617,0.670065061337395,1.91381625495949,0.749007023947182,2.99161459204025,3.72973962092432,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,27.9136835265898,20.7085632785872,18.3571399421924,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,2.53804844142407,1.40354529212299,0.552485933615378,0,0,0.131124414959424,0.451199612907412,0.847168708148562,0.784349769176855,1.46139224653261,3.0609972378934,0,0.340187410553031,0.431831832204279,0,0,0,1.01950509218015,0.831076008928724,0.671624264166535,2.63111851975121,3.13722541229881,2.05160100093111,0.656029291399411,1.95227036798582,0.9273691048295,0,0,3.44559322797703,2.60024098414608,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.255679882248303,0,1.15699440752685,1.53752053892085,2.4246415373971,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,2.21310859268678,0,1.08890984861323,0.753150406214233,0.43050537267123,3.36942951335251,1.7737206141467,2.06751060186264,13.7010854492686,16.0573813499899,17.0894156152249,29.5407401567658,22.6249250197407,15.5633594686252,16.7409745543816,19.0350042310625,0,0,0,0,1.58696134274089,17.5008934637099,9.72500263645816,9.38023045734238,4.97913962344153,9.52531122257473,3.24621940274555,5.61594356226918,0.228234679033192,0.47003968731907,12.5317238545034,10.665382001501,1.2847046008296,0,0.425846237690326,1.37402137902306,0.921722292925374,0.671028323677248,0.333698283423817,0.586164286206121,9.46580991243824,16.0013618632026,10.5477714605633,11.3244469119259,15.5085705596634,0,0.73254089635947,0.242721043499027,0,6.5351313765475,0,0,0,1.9882952955326,3.09472716103128,0.111308705022906,2.80166586185491,0,2.19172787076177,12.9853440299639,3.27512572210559,0.511343412510774,0,0,0,0.895105873378046,0,2.17015492401254,7.18449277040819,0,3.87733098438087,5.38054969338737,0,0,0.0874599999961957,1.44999915086959,0.910347586283997,0,0.236387681767936,0,0,0,5.31444831488303,2.41192877250816,1.52581736317083,0.774054819518572,0.886642856860642,1.75508317723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| ||
|short_description=p1@PRKCQ | |short_description=p1@PRKCQ | ||
}} | }} |
Latest revision as of 21:18, 18 September 2015
Short description: | p1@PRKCQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRKCQ_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000397176, NM_001242413, NM_006257, uc001ijj.1, uc009xin.1, uc010qax.1_5end |
EntrezGene: | PRKCQ |
HGNC: | 9410 |
UniProt: | Q04759Q5JUN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.05e-18 | 25 |
pro-T cell | 1.05e-18 | 25 |
mature alpha-beta T cell | 2.89e-17 | 18 |
alpha-beta T cell | 2.89e-17 | 18 |
immature T cell | 2.89e-17 | 18 |
mature T cell | 2.89e-17 | 18 |
immature alpha-beta T cell | 2.89e-17 | 18 |
lymphoid lineage restricted progenitor cell | 2.87e-11 | 52 |
CD8-positive, alpha-beta T cell | 3.89e-11 | 11 |
lymphocyte | 8.05e-11 | 53 |
common lymphoid progenitor | 8.05e-11 | 53 |
hematopoietic stem cell | 8.17e-09 | 168 |
hematopoietic cell | 1.96e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.70e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-07 | 161 |
CD4-positive, alpha-beta T cell | 5.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.97e-24 | 114 |
telencephalon | 8.14e-14 | 34 |
neural tube | 1.07e-13 | 56 |
neural rod | 1.07e-13 | 56 |
future spinal cord | 1.07e-13 | 56 |
neural keel | 1.07e-13 | 56 |
brain grey matter | 1.22e-13 | 34 |
gray matter | 1.22e-13 | 34 |
regional part of forebrain | 8.20e-13 | 41 |
forebrain | 8.20e-13 | 41 |
anterior neural tube | 8.20e-13 | 41 |
future forebrain | 8.20e-13 | 41 |
regional part of nervous system | 1.13e-12 | 53 |
regional part of brain | 1.13e-12 | 53 |
regional part of telencephalon | 1.20e-12 | 32 |
cerebral hemisphere | 1.28e-12 | 32 |
central nervous system | 6.88e-12 | 81 |
blood | 1.62e-11 | 15 |
haemolymphatic fluid | 1.62e-11 | 15 |
organism substance | 1.62e-11 | 15 |
nervous system | 7.30e-10 | 89 |
cerebral cortex | 1.82e-09 | 25 |
pallium | 1.82e-09 | 25 |
pre-chordal neural plate | 3.02e-09 | 61 |
regional part of cerebral cortex | 3.58e-09 | 22 |
brain | 7.52e-09 | 68 |
future brain | 7.52e-09 | 68 |
neural plate | 8.26e-09 | 82 |
presumptive neural plate | 8.26e-09 | 82 |
neocortex | 2.42e-08 | 20 |
neurectoderm | 9.12e-08 | 86 |
ecto-epithelium | 1.40e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.15e-09 | 39 |
hematologic cancer | 3.05e-08 | 51 |
immune system cancer | 3.05e-08 | 51 |
myeloid leukemia | 1.64e-07 | 31 |