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FFCP PHASE1:Mm9::chr9:40077015..40077026,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235281
|EntrezGene=235281
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BHK2
|UniProt=Q8BHK2
|association_with_transcript=213bp_to_ENSMUST00000049941_5end
|association_with_transcript=213bp_to_ENSMUST00000049941_5end
|cluster_id=chr9:40077015..40077026,+
|description=CAGE_peak_7_at_Scn3b_5end
|description=CAGE_peak_7_at_Scn3b_5end
|id=chr9:40077015..40077026,+
|id=chr9:40077015..40077026,+
|ontology_enrichment_celltype=CL:0000117!7.80e-15!23;CL:0000337!7.80e-15!23;CL:0000540!1.28e-14!33;CL:0000047!1.28e-14!33;CL:0000031!1.28e-14!33;CL:0000404!1.28e-14!33;CL:0000393!1.78e-11!39;CL:0000211!1.78e-11!39;CL:0000221!3.84e-11!44;CL:0000133!3.84e-11!44;CL:0002319!8.18e-11!43;CL:0000055!2.27e-08!50
|ontology_enrichment_celltype=CL:0000117!7.80e-15!23;CL:0000337!7.80e-15!23;CL:0000540!1.28e-14!33;CL:0000047!1.28e-14!33;CL:0000031!1.28e-14!33;CL:0000404!1.28e-14!33;CL:0000393!1.78e-11!39;CL:0000211!1.78e-11!39;CL:0000221!3.84e-11!44;CL:0000133!3.84e-11!44;CL:0002319!8.18e-11!43;CL:0000055!2.27e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.84e-24,23;CL:0000337,7.84e-24,23;CL:0000540,1.38e-15,33;CL:0000047,1.38e-15,33;CL:0000031,1.38e-15,33;CL:0000404,1.38e-15,33;CL:0000393,1.13e-12,39;CL:0000211,1.13e-12,39;CL:0002319,3.48e-11,43;CL:0000221,7.42e-11,44;CL:0000133,7.42e-11,44;CL:0002612,7.45e-10,3;CL:0000120,6.06e-09,3;CL:0002613,9.89e-09,3;CL:0002610,9.24e-08,3;CL:0002611,6.30e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.17e-18!75;UBERON:0001016!1.17e-18!75;UBERON:0001017!1.34e-18!73;UBERON:0005743!1.34e-18!73;UBERON:0004121!2.51e-18!102;UBERON:0000924!2.51e-18!102;UBERON:0006601!2.51e-18!102;UBERON:0002020!6.90e-17!34;UBERON:0002346!8.88e-17!71;UBERON:0003075!8.88e-17!71;UBERON:0007284!8.88e-17!71;UBERON:0001049!1.86e-13!52;UBERON:0005068!1.86e-13!52;UBERON:0006241!1.86e-13!52;UBERON:0007135!1.86e-13!52;UBERON:0002791!9.35e-13!29;UBERON:0003528!9.35e-13!29;UBERON:0001893!9.35e-13!29;UBERON:0000955!7.92e-12!50;UBERON:0006238!7.92e-12!50;UBERON:0000033!1.71e-11!63;UBERON:0002616!3.76e-11!49;UBERON:0003056!1.39e-10!49;UBERON:0003080!1.51e-10!40;UBERON:0002780!4.64e-10!39;UBERON:0001890!4.64e-10!39;UBERON:0006240!4.64e-10!39;UBERON:0000956!4.63e-09!21;UBERON:0001869!4.63e-09!21;UBERON:0000203!4.63e-09!21;UBERON:0002619!2.21e-07!17
|ontology_enrichment_uberon=UBERON:0000073!1.17e-18!75;UBERON:0001016!1.17e-18!75;UBERON:0001017!1.34e-18!73;UBERON:0005743!1.34e-18!73;UBERON:0004121!2.51e-18!102;UBERON:0000924!2.51e-18!102;UBERON:0006601!2.51e-18!102;UBERON:0002020!6.90e-17!34;UBERON:0002346!8.88e-17!71;UBERON:0003075!8.88e-17!71;UBERON:0007284!8.88e-17!71;UBERON:0001049!1.86e-13!52;UBERON:0005068!1.86e-13!52;UBERON:0006241!1.86e-13!52;UBERON:0007135!1.86e-13!52;UBERON:0002791!9.35e-13!29;UBERON:0003528!9.35e-13!29;UBERON:0001893!9.35e-13!29;UBERON:0000955!7.92e-12!50;UBERON:0006238!7.92e-12!50;UBERON:0000033!1.71e-11!63;UBERON:0002616!3.76e-11!49;UBERON:0003056!1.39e-10!49;UBERON:0003080!1.51e-10!40;UBERON:0002780!4.64e-10!39;UBERON:0001890!4.64e-10!39;UBERON:0006240!4.64e-10!39;UBERON:0000956!4.63e-09!21;UBERON:0001869!4.63e-09!21;UBERON:0000203!4.63e-09!21;UBERON:0002619!2.21e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.61e-23,34;UBERON:0001017,3.73e-20,73;UBERON:0000073,8.22e-20,54;UBERON:0001016,1.82e-19,75;UBERON:0001049,3.30e-15,52;UBERON:0005068,3.30e-15,52;UBERON:0006241,3.30e-15,52;UBERON:0007135,3.30e-15,52;UBERON:0001948,3.75e-15,5;UBERON:0002315,3.75e-15,5;UBERON:0004121,3.51e-14,95;UBERON:0000924,3.51e-14,95;UBERON:0006601,3.51e-14,95;UBERON:0003528,4.20e-13,29;UBERON:0002791,4.20e-13,29;UBERON:0001893,4.20e-13,29;UBERON:0002240,1.47e-12,6;UBERON:0005174,1.47e-12,6;UBERON:0001137,1.47e-12,6;UBERON:0002346,1.51e-11,64;UBERON:0003075,1.51e-11,64;UBERON:0007284,1.51e-11,64;UBERON:0002780,1.25e-10,39;UBERON:0001890,1.25e-10,39;UBERON:0006240,1.25e-10,39;UBERON:0003080,2.73e-10,40;UBERON:0002257,7.45e-10,3;UBERON:0000955,8.41e-10,47;UBERON:0006238,8.41e-10,47;UBERON:0010371,1.34e-09,73;UBERON:0000025,9.48e-09,114;UBERON:0000369,1.06e-08,5;UBERON:0002435,1.06e-08,5;UBERON:0000204,1.06e-08,5;UBERON:0010082,1.06e-08,5;UBERON:0002616,1.46e-08,46;UBERON:0002420,4.30e-08,8;UBERON:0007245,4.30e-08,8;UBERON:0010009,4.30e-08,8;UBERON:0010011,4.30e-08,8;UBERON:0000454,4.30e-08,8;UBERON:0003056,7.37e-08,49;UBERON:0004111,7.82e-08,122;UBERON:0004684,9.24e-08,3;UBERON:0002275,9.24e-08,3;UBERON:0011216,1.79e-07,194;UBERON:0000956,3.69e-07,21;UBERON:0001869,3.69e-07,21;UBERON:0000203,3.69e-07,21;UBERON:0002619,4.44e-07,17;UBERON:0002256,6.30e-07,2;UBERON:0010314,9.35e-07,92
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,2.02316460859598,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.540023753326763,0.420649922702764,2.85650984403804,3.53389665522582,0.857435594504678,0.862609239164127,0.919218786610021,1.10115880999389,1.0214987046815,1.22885226604995,2.1101806036831,2.92760459527711,1.04182674111352,0,0.56276261003168,1.68078072554491,3.83017161115768,3.98640706237488,3.16879057903011,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.520455980298408,0.608930956624282,0.461230994512117,0.60289056221049,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,1.38219787324151,1.91206752211504,0.255715457330331,0.83115217823824,1.94689515681309,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0,0,4.20579897128254,2.05809224758569,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0,0.975668239288994,0.630540576424764,1.55025282754142,2.87018583583477,1.96635977658886,1.55416483679306,1.01254341007058,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,2.89189184779626,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,0.572895513439397,1.54667864109319,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,2.5888015587591,0,0,0.170733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.565879024158229,0.561849044819294,0.512201219238954,0.804096565378586,0,0.927074607558844,0.38581844092741,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0,1.59881058295561,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0,0.474540072496697,0.492522411877817,0,0.619747364743864,0.192906610981141,0.749431733813838,0,0.644613162144895,0.765153328275374,0.441182838239031,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,2.02316460859598,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.540023753326763,0.420649922702764,2.85650984403804,3.53389665522582,0.857435594504678,0.862609239164127,0.919218786610021,1.10115880999389,1.0214987046815,1.22885226604995,2.1101806036831,2.92760459527711,1.04182674111352,0,0.56276261003168,1.68078072554491,3.83017161115768,3.98640706237488,3.16879057903011,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.520455980298408,0.608930956624282,0.461230994512117,0.60289056221049,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,1.38219787324151,1.91206752211504,0.255715457330331,0.83115217823824,1.94689515681309,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0,0,4.20579897128254,2.05809224758569,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0,0.975668239288994,0.630540576424764,1.55025282754142,2.87018583583477,1.96635977658886,1.55416483679306,1.01254341007058,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,2.89189184779626,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,0.572895513439397,1.54667864109319,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,2.5888015587591,0,0,0.170733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.565879024158229,0.561849044819294,0.512201219238954,0.804096565378586,0,0.927074607558844,0.38581844092741,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0,1.59881058295561,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0,0.474540072496697,0.492522411877817,0,0.619747364743864,0.192906610981141,0.749431733813838,0,0.644613162144895,0.765153328275374,0.441182838239031,0.463735671240843
|short_description=p7@Scn3b
|short_description=p7@Scn3b
}}
}}

Latest revision as of 15:04, 26 September 2015

Short description:p7@Scn3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Scn3b_5end
Coexpression cluster:NA
Association with transcript: 213bp_to_ENSMUST00000049941_5end
EntrezGene:Scn3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Scn3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter8.61e-2334
central nervous system3.73e-2073
regional part of nervous system8.22e-2054
nervous system1.82e-1975
neural tube3.30e-1552
neural rod3.30e-1552
future spinal cord3.30e-1552
neural keel3.30e-1552
regional part of spinal cord3.75e-155
gray matter of spinal cord3.75e-155
ectoderm-derived structure3.51e-1495
ectoderm3.51e-1495
presumptive ectoderm3.51e-1495
brain grey matter4.20e-1329
regional part of telencephalon4.20e-1329
telencephalon4.20e-1329
spinal cord1.47e-126
dorsal region element1.47e-126
dorsum1.47e-126
neurectoderm1.51e-1164
neural plate1.51e-1164
presumptive neural plate1.51e-1164
regional part of forebrain1.25e-1039
forebrain1.25e-1039
future forebrain1.25e-1039
anterior neural tube2.73e-1040
ventral horn of spinal cord7.45e-103
brain8.41e-1047
future brain8.41e-1047
ecto-epithelium1.34e-0973
tube9.48e-09114
corpus striatum1.06e-085
striatum1.06e-085
ventral part of telencephalon1.06e-085
future corpus striatum1.06e-085
regional part of brain1.46e-0846
basal ganglion4.30e-088
nuclear complex of neuraxis4.30e-088
aggregate regional part of brain4.30e-088
collection of basal ganglia4.30e-088
cerebral subcortex4.30e-088
pre-chordal neural plate7.37e-0849
anatomical conduit7.82e-08122
raphe nuclei9.24e-083
reticular formation9.24e-083
organ system subdivision1.79e-07194
cerebral cortex3.69e-0721
cerebral hemisphere3.69e-0721
pallium3.69e-0721
regional part of cerebral cortex4.44e-0717
dorsal horn of spinal cord6.30e-072
structure with developmental contribution from neural crest9.35e-0792
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