FFCP PHASE1:Mm9::chrX:7667561..7667565,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22376 | |EntrezGene=22376 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=P70315,Q53WY0 | |UniProt=P70315,Q53WY0 | ||
|association_with_transcript=51bp_to_NM_009515,uc009sns.2_5end | |association_with_transcript=51bp_to_NM_009515,uc009sns.2_5end | ||
|cluster_id=chrX:7667561..7667565,- | |||
|description=CAGE_peak_2_at_Was_5end | |description=CAGE_peak_2_at_Was_5end | ||
|id=chrX:7667561..7667565,- | |id=chrX:7667561..7667565,- | ||
|ontology_enrichment_celltype=CL:0000988!2.22e-10!32;CL:0002032!2.22e-10!32;CL:0000037!2.22e-10!32;CL:0000566!2.22e-10!32;CL:0000837!2.22e-10!32;CL:0000838!2.26e-07!12;CL:0002031!2.67e-07!25;CL:0002320!8.08e-07!46;CL:0000134!8.08e-07!46 | |ontology_enrichment_celltype=CL:0000988!2.22e-10!32;CL:0002032!2.22e-10!32;CL:0000037!2.22e-10!32;CL:0000566!2.22e-10!32;CL:0000837!2.22e-10!32;CL:0000838!2.26e-07!12;CL:0002031!2.67e-07!25;CL:0002320!8.08e-07!46;CL:0000134!8.08e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.40e-20,32;CL:0002032,8.40e-20,32;CL:0000037,8.40e-20,32;CL:0000837,8.40e-20,32;CL:0002320,1.28e-15,46;CL:0000134,1.28e-15,46;CL:0002031,6.90e-14,25;CL:0000219,1.77e-12,54;CL:0000738,1.59e-11,17;CL:0002087,1.59e-11,17;CL:0000838,2.09e-11,12;CL:0000049,1.42e-10,19;CL:0000542,2.15e-10,13;CL:0000051,2.15e-10,13;CL:0000084,9.74e-10,11;CL:0000827,9.74e-10,11;CL:0000034,1.26e-09,97;CL:0000763,1.70e-08,16;CL:0000723,7.96e-08,91;CL:0000048,7.96e-08,91;CL:0000791,3.25e-07,9;CL:0000789,3.25e-07,9;CL:0002420,3.25e-07,9;CL:0002419,3.25e-07,9;CL:0000790,3.25e-07,9;CL:0000557,3.77e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.31e-07,3;DOID:4045,1.31e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-18!45;UBERON:0003061!1.19e-18!45;UBERON:0002193!6.06e-18!48;UBERON:0002405!1.26e-15!70;UBERON:0004177!5.70e-12!29;UBERON:0003081!3.23e-10!88;UBERON:0005057!1.30e-09!51;UBERON:0002370!2.28e-09!23;UBERON:0000974!2.28e-09!23;UBERON:0004807!2.28e-09!23;UBERON:0005058!2.28e-09!23;UBERON:0003351!2.28e-09!23;UBERON:0009113!2.28e-09!23;UBERON:0003295!2.28e-09!23;UBERON:0009722!2.28e-09!23;UBERON:0005562!2.28e-09!23;UBERON:0007690!2.28e-09!23;UBERON:0006562!1.17e-08!24;UBERON:0003408!1.17e-08!24;UBERON:0001557!1.17e-08!24;UBERON:0001042!1.17e-08!24;UBERON:0008814!1.17e-08!24;UBERON:0009145!1.17e-08!24;UBERON:0001474!2.58e-08!22;UBERON:0004765!2.58e-08!22;UBERON:0001434!2.58e-08!22;UBERON:0000065!6.56e-08!41;UBERON:0001004!1.74e-07!42;UBERON:0002371!1.76e-07!16;UBERON:0000072!7.01e-07!27;UBERON:0002384!8.08e-07!46 | |ontology_enrichment_uberon=UBERON:0002390!1.19e-18!45;UBERON:0003061!1.19e-18!45;UBERON:0002193!6.06e-18!48;UBERON:0002405!1.26e-15!70;UBERON:0004177!5.70e-12!29;UBERON:0003081!3.23e-10!88;UBERON:0005057!1.30e-09!51;UBERON:0002370!2.28e-09!23;UBERON:0000974!2.28e-09!23;UBERON:0004807!2.28e-09!23;UBERON:0005058!2.28e-09!23;UBERON:0003351!2.28e-09!23;UBERON:0009113!2.28e-09!23;UBERON:0003295!2.28e-09!23;UBERON:0009722!2.28e-09!23;UBERON:0005562!2.28e-09!23;UBERON:0007690!2.28e-09!23;UBERON:0006562!1.17e-08!24;UBERON:0003408!1.17e-08!24;UBERON:0001557!1.17e-08!24;UBERON:0001042!1.17e-08!24;UBERON:0008814!1.17e-08!24;UBERON:0009145!1.17e-08!24;UBERON:0001474!2.58e-08!22;UBERON:0004765!2.58e-08!22;UBERON:0001434!2.58e-08!22;UBERON:0000065!6.56e-08!41;UBERON:0001004!1.74e-07!42;UBERON:0002371!1.76e-07!16;UBERON:0000072!7.01e-07!27;UBERON:0002384!8.08e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.10e-29,48;UBERON:0002405,4.10e-29,48;UBERON:0002390,6.15e-29,45;UBERON:0003061,6.15e-29,45;UBERON:0004177,3.51e-16,29;UBERON:0005057,3.51e-16,29;UBERON:0002384,1.28e-15,46;UBERON:0002370,8.94e-15,23;UBERON:0000974,8.94e-15,23;UBERON:0004807,8.94e-15,23;UBERON:0005058,8.94e-15,23;UBERON:0003351,8.94e-15,23;UBERON:0009113,8.94e-15,23;UBERON:0003295,8.94e-15,23;UBERON:0009722,8.94e-15,23;UBERON:0005562,8.94e-15,23;UBERON:0007690,8.94e-15,23;UBERON:0006562,5.19e-14,24;UBERON:0003408,5.19e-14,24;UBERON:0001557,5.19e-14,24;UBERON:0001042,5.19e-14,24;UBERON:0008814,5.19e-14,24;UBERON:0009145,5.19e-14,24;UBERON:0002371,2.92e-13,16;UBERON:0000077,1.15e-12,35;UBERON:0000072,4.59e-12,27;UBERON:0003081,1.63e-11,87;UBERON:0002204,1.24e-09,32;UBERON:0000926,4.57e-09,120;UBERON:0004120,4.57e-09,120;UBERON:0006603,4.57e-09,120;UBERON:0001474,5.74e-09,22;UBERON:0004765,5.74e-09,22;UBERON:0001434,5.74e-09,22;UBERON:0007811,3.36e-08,36;UBERON:0000065,8.33e-07,41 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.93684985162364,1.12630977721333,0.936258105287974,0,0.558405112967355,1.88320802924326,2.09808965805594,0.999329285446988,1.21485160433896,0,1.73504190947031,1.64537320326887,2.12194825899015,0.340173160604279,1.39007331681239,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,2.3440060335714,4.18818995179039,7.64700934440319,7.5135003345429,2.42755176515577,0,0,0,0,0,0,0,0,0,2.34895648480831,3.62681071005672,1.00828139742739,0,0,0,0,0,0,0,0,3.1496490104849,0.988866362566974,2.8419204597844,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0,0,0.433798070759735,0.884610551949874,0.323533699894818,0.220841518460394,0.969750506270444,0,0,0,0,1.7972268675888,0.599902730993408,2.54140454146129,0.149790639404823,0.457500602818626,0,0,0,0,0,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,3.51106593656617,2.31613116403244,1.42081749697796,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,1.50791283939272,2.17562273527484,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0,0.16488625294148,0.322928853391811,0,0,0,0.291480836629851,0,1.02522528478712,0.412773735926445,0.740778109478847,1.13021074202815,0.136694227721025,1.37266903923914,2.20971958992012,1.6794174278839,2.07299960706636,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,1.89606672376907,0.608175645870493,1.43795340030758,1.03936658382236,1.43221356533985,2.18549490259391,1.08175904567972,2.06765338044408,1.21159739937777,1.5241361331,0.504130925684203,1.07203668813728,2.02044867444692,1.40252282617883,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0.661774257358546,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,1.93684985162364,1.12630977721333,0.936258105287974,0,0.558405112967355,1.88320802924326,2.09808965805594,0.999329285446988,1.21485160433896,0,1.73504190947031,1.64537320326887,2.12194825899015,0.340173160604279,1.39007331681239,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,2.3440060335714,4.18818995179039,7.64700934440319,7.5135003345429,2.42755176515577,0,0,0,0,0,0,0,0,0,2.34895648480831,3.62681071005672,1.00828139742739,0,0,0,0,0,0,0,0,3.1496490104849,0.988866362566974,2.8419204597844,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0,0,0.433798070759735,0.884610551949874,0.323533699894818,0.220841518460394,0.969750506270444,0,0,0,0,1.7972268675888,0.599902730993408,2.54140454146129,0.149790639404823,0.457500602818626,0,0,0,0,0,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,3.51106593656617,2.31613116403244,1.42081749697796,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,1.50791283939272,2.17562273527484,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0,0.16488625294148,0.322928853391811,0,0,0,0.291480836629851,0,1.02522528478712,0.412773735926445,0.740778109478847,1.13021074202815,0.136694227721025,1.37266903923914,2.20971958992012,1.6794174278839,2.07299960706636,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,1.89606672376907,0.608175645870493,1.43795340030758,1.03936658382236,1.43221356533985,2.18549490259391,1.08175904567972,2.06765338044408,1.21159739937777,1.5241361331,0.504130925684203,1.07203668813728,2.02044867444692,1.40252282617883,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0.661774257358546,0.463735671240843 | ||
|short_description=p2@Was | |short_description=p2@Was | ||
}} | }} |
Latest revision as of 00:38, 2 October 2015
Short description: | p2@Was |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Was_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 51bp_to_NM_009515, uc009sns.2_5end |
EntrezGene: | Was |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.40e-20 | 32 |
hematopoietic oligopotent progenitor cell | 8.40e-20 | 32 |
hematopoietic stem cell | 8.40e-20 | 32 |
hematopoietic multipotent progenitor cell | 8.40e-20 | 32 |
connective tissue cell | 1.28e-15 | 46 |
mesenchymal cell | 1.28e-15 | 46 |
hematopoietic lineage restricted progenitor cell | 6.90e-14 | 25 |
motile cell | 1.77e-12 | 54 |
leukocyte | 1.59e-11 | 17 |
nongranular leukocyte | 1.59e-11 | 17 |
lymphoid lineage restricted progenitor cell | 2.09e-11 | 12 |
common myeloid progenitor | 1.42e-10 | 19 |
lymphocyte | 2.15e-10 | 13 |
common lymphoid progenitor | 2.15e-10 | 13 |
T cell | 9.74e-10 | 11 |
pro-T cell | 9.74e-10 | 11 |
stem cell | 1.26e-09 | 97 |
myeloid cell | 1.70e-08 | 16 |
somatic stem cell | 7.96e-08 | 91 |
multi fate stem cell | 7.96e-08 | 91 |
mature alpha-beta T cell | 3.25e-07 | 9 |
alpha-beta T cell | 3.25e-07 | 9 |
immature T cell | 3.25e-07 | 9 |
mature T cell | 3.25e-07 | 9 |
immature alpha-beta T cell | 3.25e-07 | 9 |
granulocyte monocyte progenitor cell | 3.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.31e-07 | 3 |
muscle cancer | 1.31e-07 | 3 |