FFCP PHASE1:Hg19::chr1:57889755..57889770,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1600 | |EntrezGene=1600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2661 | |HGNC=2661 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000371230,ENST00000371233_5end | |association_with_transcript=-26bp_to_ENST00000371230,ENST00000371233_5end | ||
|cluster_id=chr1:57889755..57889770,- | |||
|coexpression_cluster_id=C1859 | |||
|description=CAGE_peak_9_at_DAB1_5end | |description=CAGE_peak_9_at_DAB1_5end | ||
|id=chr1:57889755..57889770,- | |id=chr1:57889755..57889770,- | ||
|ontology_enrichment_celltype=CL:0002319!8.90e-10!25;CL:0000133!1.05e-09!59;CL:0000047!1.12e-09!8;CL:0002322!7.57e-08!5;CL:0000128!1.97e-07!7;CL:0000126!1.97e-07!7;CL:0000127!1.97e-07!7;CL:0002453!1.97e-07!7;CL:0000221!5.76e-07!71;CL:0000540!6.89e-07!6;CL:0000031!6.89e-07!6;CL:0000404!6.89e-07!6 | |ontology_enrichment_celltype=CL:0002319!8.90e-10!25;CL:0000133!1.05e-09!59;CL:0000047!1.12e-09!8;CL:0002322!7.57e-08!5;CL:0000128!1.97e-07!7;CL:0000126!1.97e-07!7;CL:0000127!1.97e-07!7;CL:0002453!1.97e-07!7;CL:0000221!5.76e-07!71;CL:0000540!6.89e-07!6;CL:0000031!6.89e-07!6;CL:0000404!6.89e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.61e-19;3!CL:0002319;1.33e-13;25!CL:0000047;2.98e-13;2!CL:0000128;1.16e-08;7!CL:0000126;1.16e-08;7!CL:0000127;1.16e-08;7!CL:0002591;2.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.27e-19,3;CL:0002319,1.51e-13,25;CL:0000047,1.57e-12,8;CL:0000128,1.34e-08,7;CL:0000126,1.34e-08,7;CL:0000127,1.34e-08,7;CL:0002453,1.34e-08,7;CL:0000133,1.90e-08,59;CL:0002591,2.47e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.25e-20;3 | |||
|ontology_enrichment_disease=DOID:3095!3.81e-09!22;DOID:2994!3.81e-09!22;DOID:171!5.19e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.99e-13;22!DOID:2994;2.99e-13;22!DOID:171;2.82e-10;10!DOID:0050619;9.13e-08;1!DOID:1357;9.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.54e-13,22;DOID:2994,2.54e-13,22;DOID:171,2.76e-10,10;DOID:0050619,8.84e-08,1;DOID:1357,8.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.77e-52!94;UBERON:0001016!2.77e-52!94;UBERON:0005743!2.21e-51!86;UBERON:0001017!8.75e-51!82;UBERON:0002346!1.99e-44!90;UBERON:0003075!1.78e-41!86;UBERON:0007284!1.78e-41!86;UBERON:0001049!7.36e-40!57;UBERON:0005068!7.36e-40!57;UBERON:0006241!7.36e-40!57;UBERON:0007135!7.36e-40!57;UBERON:0000955!2.93e-37!69;UBERON:0006238!2.93e-37!69;UBERON:0000924!2.78e-35!173;UBERON:0006601!2.78e-35!173;UBERON:0002616!6.07e-34!59;UBERON:0004121!9.09e-33!169;UBERON:0000033!3.92e-28!123;UBERON:0002780!5.59e-28!41;UBERON:0001890!5.59e-28!41;UBERON:0006240!5.59e-28!41;UBERON:0003056!4.03e-27!61;UBERON:0003080!4.46e-27!42;UBERON:0001893!3.79e-26!34;UBERON:0000153!5.84e-26!129;UBERON:0007811!5.84e-26!129;UBERON:0002791!5.36e-25!33;UBERON:0001869!4.17e-24!32;UBERON:0002020!5.87e-24!34;UBERON:0003528!5.87e-24!34;UBERON:0000956!3.95e-21!25;UBERON:0000203!3.95e-21!25;UBERON:0007023!1.63e-19!115;UBERON:0002619!4.64e-17!22;UBERON:0001950!1.44e-14!20;UBERON:0003076!7.35e-14!15;UBERON:0003057!7.35e-14!15;UBERON:0000475!9.64e-11!365;UBERON:0004733!1.21e-10!12;UBERON:0002028!1.21e-10!12;UBERON:0007277!1.21e-10!12;UBERON:0004732!1.24e-09!13;UBERON:0000468!7.13e-09!659;UBERON:0000025!1.89e-08!194;UBERON:0000349!6.83e-08!5;UBERON:0002680!3.17e-07!9;UBERON:0001895!3.17e-07!9;UBERON:0010092!3.17e-07!9;UBERON:0002420!8.88e-07!9;UBERON:0007245!8.88e-07!9;UBERON:0010009!8.88e-07!9;UBERON:0010011!8.88e-07!9;UBERON:0000454!8.88e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001016;5.16e-12;83!UBERON:0000956;4.11e-11;25!UBERON:0000203;4.11e-11;25!UBERON:0000922;1.30e-10;49!UBERON:0002037;2.28e-10;6!UBERON:0000955;5.95e-10;68!UBERON:0001017;9.22e-10;75!UBERON:0000073;1.61e-08;53!UBERON:0002616;1.61e-08;53!UBERON:0002791;2.46e-08;32!UBERON:0001869;2.72e-08;32!UBERON:0001764;9.13e-08;1!UBERON:0001825;9.13e-08;1!UBERON:0003528;1.16e-07;34!UBERON:0002020;1.16e-07;34!UBERON:0002780;2.77e-07;41!UBERON:0001890;2.77e-07;41!UBERON:0002346;3.18e-07;4!UBERON:0000923;3.18e-07;4!UBERON:0010316;3.18e-07;4!UBERON:0005291;3.18e-07;4!UBERON:0002680;4.69e-07;9!UBERON:0001895;4.69e-07;9!UBERON:0001893;5.92e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.45e-26,89;UBERON:0001017,1.71e-23,81;UBERON:0004121,1.11e-17,171;UBERON:0000924,1.11e-17,171;UBERON:0006601,1.11e-17,171;UBERON:0002346,3.44e-15,86;UBERON:0000955,5.22e-15,68;UBERON:0006238,5.22e-15,68;UBERON:0001049,1.05e-13,56;UBERON:0005068,1.05e-13,56;UBERON:0006241,1.05e-13,56;UBERON:0007135,1.05e-13,56;UBERON:0000073,3.20e-12,53;UBERON:0002616,3.20e-12,53;UBERON:0003075,5.11e-12,82;UBERON:0007284,5.11e-12,82;UBERON:0011216,3.20e-11,223;UBERON:0000956,4.83e-11,25;UBERON:0000203,4.83e-11,25;UBERON:0002037,2.24e-10,6;UBERON:0006215,2.24e-10,6;UBERON:0010371,6.29e-09,104;UBERON:0002791,1.61e-08,32;UBERON:0001869,1.61e-08,32;UBERON:0002780,1.79e-08,41;UBERON:0001890,1.79e-08,41;UBERON:0003080,1.79e-08,41;UBERON:0006240,1.79e-08,41;UBERON:0003528,5.54e-08,34;UBERON:0002020,5.54e-08,34;UBERON:0001893,5.54e-08,34;UBERON:0001764,8.84e-08,1;UBERON:0001825,8.84e-08,1;UBERON:0002680,4.64e-07,9;UBERON:0001895,4.64e-07,9;UBERON:0010092,4.64e-07,9;UBERON:0003076,5.17e-07,15;UBERON:0003057,5.17e-07,15;UBERON:0003056,9.46e-07,61 | |||
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|short_description=p9@DAB1 | |short_description=p9@DAB1 | ||
}} | }} |
Latest revision as of 16:34, 18 September 2015
Short description: | p9@DAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DAB1_5end |
Coexpression cluster: | C1859_occipital_Neural_parietal_temporal_teratocarcinoma_brain_duodenum |
Association with transcript: | -26bp_to_ENST00000371230, ENST00000371233_5end |
EntrezGene: | DAB1 |
HGNC: | 2661 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.27e-19 | 3 |
neural cell | 1.51e-13 | 25 |
neuronal stem cell | 1.57e-12 | 8 |
oligodendrocyte | 1.34e-08 | 7 |
macroglial cell | 1.34e-08 | 7 |
astrocyte | 1.34e-08 | 7 |
oligodendrocyte precursor cell | 1.34e-08 | 7 |
neurectodermal cell | 1.90e-08 | 59 |
smooth muscle cell of the pulmonary artery | 2.47e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.54e-13 | 22 |
germ cell cancer | 2.54e-13 | 22 |
neuroectodermal tumor | 2.76e-10 | 10 |
paranasal sinus cancer | 8.84e-08 | 1 |
maxillary sinus cancer | 8.84e-08 | 1 |