FFCP PHASE1:Hg19::chr11:75062829..75062951,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:75062829..75062951,-
|short_description=p2@ARRB1
|description=CAGE_peak_2_at_ARRB1_5end
|association_with_transcript=0bp_to_ENST00000393505,NM_004041,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=408 | |EntrezGene=408 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=711 | |HGNC=711 | ||
|TSSclassifier=strong | |||
|UniProt=P49407,B7Z1Q3 | |UniProt=P49407,B7Z1Q3 | ||
|association_with_transcript=0bp_to_ENST00000393505,NM_004041,NM_020251,uc001owe.1,uc001owf.1_5end | |||
|cluster_id=chr11:75062829..75062951,- | |||
|description=CAGE_peak_2_at_ARRB1_5end | |||
|id=chr11:75062829..75062951,- | |||
|ontology_enrichment_celltype=CL:0000763!1.60e-26!112;CL:0000049!1.60e-26!112;CL:0000766!1.23e-18!76;CL:0002032!9.27e-18!165;CL:0000837!9.27e-18!165;CL:0000037!1.46e-17!172;CL:0000566!1.46e-17!172;CL:0000988!4.42e-16!182;CL:0000557!2.97e-15!71;CL:0000839!5.81e-14!70;CL:0002194!6.00e-13!63;CL:0000576!6.00e-13!63;CL:0000040!6.00e-13!63;CL:0000559!6.00e-13!63;CL:0002009!1.21e-12!65;CL:0002057!6.38e-12!42;CL:0000860!3.83e-10!45;CL:0000738!8.18e-10!140;CL:0000115!7.22e-09!35;CL:0002031!5.53e-08!124;CL:0002087!1.28e-07!119;CL:0002139!2.07e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000763;1.88e-10;100!CL:0000766;1.51e-09;69!CL:0000576;6.04e-09;48!CL:0000473;4.72e-08;39!CL:0000234;4.72e-08;39!CL:0002139;1.59e-07;24!CL:0000115;1.64e-07;36!CL:0000860;4.49e-07;33!CL:0002057;4.49e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.88e-29,108;CL:0000049,5.88e-29,108;CL:0000766,4.62e-21,72;CL:0002032,6.69e-20,161;CL:0000837,6.69e-20,161;CL:0000037,8.50e-20,168;CL:0000988,4.24e-18,177;CL:0000557,1.94e-17,67;CL:0000839,5.04e-16,66;CL:0002194,4.83e-15,59;CL:0000576,4.83e-15,59;CL:0000040,4.83e-15,59;CL:0000559,4.83e-15,59;CL:0002009,1.18e-14,61;CL:0000473,2.53e-14,48;CL:0000234,2.53e-14,48;CL:0000860,5.13e-12,42;CL:0002057,5.13e-12,42;CL:0000738,1.61e-11,136;CL:0002031,1.95e-09,120;CL:0002087,4.46e-09,115;CL:0000115,5.31e-09,36;CL:0002139,1.83e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.54e-09;42!CL:0000049;9.72e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!5.54e-11!31;DOID:1240!4.60e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.22e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.54e-11,31;DOID:1240,3.23e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.16e-20!115;UBERON:0002193!1.57e-17!112;UBERON:0002390!6.57e-16!102;UBERON:0003061!6.57e-16!102;UBERON:0001893!6.62e-15!34;UBERON:0002020!7.59e-15!34;UBERON:0003528!7.59e-15!34;UBERON:0001869!1.25e-14!32;UBERON:0001049!1.35e-14!57;UBERON:0005068!1.35e-14!57;UBERON:0006241!1.35e-14!57;UBERON:0007135!1.35e-14!57;UBERON:0002619!1.77e-14!22;UBERON:0002791!2.80e-14!33;UBERON:0001950!2.08e-13!20;UBERON:0002780!2.54e-13!41;UBERON:0001890!2.54e-13!41;UBERON:0006240!2.54e-13!41;UBERON:0003080!5.33e-13!42;UBERON:0002616!6.01e-12!59;UBERON:0002371!1.13e-11!80;UBERON:0001017!1.21e-11!82;UBERON:0002405!3.33e-11!115;UBERON:0005743!3.54e-11!86;UBERON:0000956!6.24e-11!25;UBERON:0000203!6.24e-11!25;UBERON:0000955!1.46e-10!69;UBERON:0006238!1.46e-10!69;UBERON:0000073!2.73e-10!94;UBERON:0001016!2.73e-10!94;UBERON:0001474!7.32e-10!86;UBERON:0003075!8.59e-08!86;UBERON:0007284!8.59e-08!86;UBERON:0002346!2.69e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.25e-14;22!UBERON:0001950;1.51e-13;20!UBERON:0001869;6.26e-13;32!UBERON:0001893;1.24e-12;34!UBERON:0003528;1.25e-12;34!UBERON:0002020;1.25e-12;34!UBERON:0002791;1.89e-12;32!UBERON:0000956;1.01e-10;25!UBERON:0000203;1.01e-10;25!UBERON:0002780;6.32e-10;41!UBERON:0001890;6.32e-10;41!UBERON:0000073;1.99e-08;53!UBERON:0002616;1.99e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.38e-19,108;UBERON:0007023,1.66e-19,114;UBERON:0002390,6.08e-18,98;UBERON:0003061,6.08e-18,98;UBERON:0002405,2.03e-15,93;UBERON:0001893,1.05e-14,34;UBERON:0003528,1.20e-14,34;UBERON:0002020,1.20e-14,34;UBERON:0002619,1.35e-14,22;UBERON:0001049,1.94e-14,56;UBERON:0005068,1.94e-14,56;UBERON:0006241,1.94e-14,56;UBERON:0007135,1.94e-14,56;UBERON:0001869,2.01e-14,32;UBERON:0000073,6.11e-14,53;UBERON:0002616,6.11e-14,53;UBERON:0002791,9.55e-14,32;UBERON:0001950,1.62e-13,20;UBERON:0002371,1.76e-13,76;UBERON:0002780,4.45e-13,41;UBERON:0001890,4.45e-13,41;UBERON:0003080,4.45e-13,41;UBERON:0006240,4.45e-13,41;UBERON:0001474,2.31e-11,82;UBERON:0001017,2.68e-11,81;UBERON:0000956,1.05e-10,25;UBERON:0000203,1.05e-10,25;UBERON:0001016,2.07e-10,89;UBERON:0000955,2.73e-10,68;UBERON:0006238,2.73e-10,68;UBERON:0003081,4.02e-08,203;UBERON:0004765,1.65e-07,90;UBERON:0003075,7.75e-07,82;UBERON:0007284,7.75e-07,82 | |||
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| ||
|short_description=p2@ARRB1 | |||
}} | }} |
Latest revision as of 05:55, 20 September 2015
Short description: | p2@ARRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARRB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393505, NM_004041, NM_020251, uc001owe.1, uc001owf.1_5end |
EntrezGene: | ARRB1 |
HGNC: | 711 |
UniProt: | P49407B7Z1Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.88e-29 | 108 |
common myeloid progenitor | 5.88e-29 | 108 |
myeloid leukocyte | 4.62e-21 | 72 |
hematopoietic oligopotent progenitor cell | 6.69e-20 | 161 |
hematopoietic multipotent progenitor cell | 6.69e-20 | 161 |
hematopoietic stem cell | 8.50e-20 | 168 |
hematopoietic cell | 4.24e-18 | 177 |
granulocyte monocyte progenitor cell | 1.94e-17 | 67 |
myeloid lineage restricted progenitor cell | 5.04e-16 | 66 |
monopoietic cell | 4.83e-15 | 59 |
monocyte | 4.83e-15 | 59 |
monoblast | 4.83e-15 | 59 |
promonocyte | 4.83e-15 | 59 |
macrophage dendritic cell progenitor | 1.18e-14 | 61 |
defensive cell | 2.53e-14 | 48 |
phagocyte | 2.53e-14 | 48 |
classical monocyte | 5.13e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.13e-12 | 42 |
leukocyte | 1.61e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.95e-09 | 120 |
nongranular leukocyte | 4.46e-09 | 115 |
endothelial cell | 5.31e-09 | 36 |
endothelial cell of vascular tree | 1.83e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.38e-19 | 108 |
adult organism | 1.66e-19 | 114 |
hematopoietic system | 6.08e-18 | 98 |
blood island | 6.08e-18 | 98 |
immune system | 2.03e-15 | 93 |
telencephalon | 1.05e-14 | 34 |
brain grey matter | 1.20e-14 | 34 |
gray matter | 1.20e-14 | 34 |
regional part of cerebral cortex | 1.35e-14 | 22 |
neural tube | 1.94e-14 | 56 |
neural rod | 1.94e-14 | 56 |
future spinal cord | 1.94e-14 | 56 |
neural keel | 1.94e-14 | 56 |
cerebral hemisphere | 2.01e-14 | 32 |
regional part of nervous system | 6.11e-14 | 53 |
regional part of brain | 6.11e-14 | 53 |
regional part of telencephalon | 9.55e-14 | 32 |
neocortex | 1.62e-13 | 20 |
bone marrow | 1.76e-13 | 76 |
regional part of forebrain | 4.45e-13 | 41 |
forebrain | 4.45e-13 | 41 |
anterior neural tube | 4.45e-13 | 41 |
future forebrain | 4.45e-13 | 41 |
bone element | 2.31e-11 | 82 |
central nervous system | 2.68e-11 | 81 |
cerebral cortex | 1.05e-10 | 25 |
pallium | 1.05e-10 | 25 |
nervous system | 2.07e-10 | 89 |
brain | 2.73e-10 | 68 |
future brain | 2.73e-10 | 68 |
lateral plate mesoderm | 4.02e-08 | 203 |
skeletal element | 1.65e-07 | 90 |
neural plate | 7.75e-07 | 82 |
presumptive neural plate | 7.75e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.54e-11 | 31 |
leukemia | 3.23e-07 | 39 |