FFCP PHASE1:Hg19::chr2:175199675..175199688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100131390 | |EntrezGene=100131390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30690 | |HGNC=30690 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000394967_5end | |association_with_transcript=1bp_to_ENST00000394967_5end | ||
|cluster_id=chr2:175199675..175199688,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_SP9_5end | |description=CAGE_peak_1_at_SP9_5end | ||
|id=chr2:175199675..175199688,+ | |id=chr2:175199675..175199688,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.90e-10!25 | |ontology_enrichment_celltype=CL:0002319!3.90e-10!25 | ||
|ontology_enrichment_celltype_v019=CL:0002551;2.54e-12;6!CL:0002319;8.05e-08;25!CL:0000047;8.90e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,2.58e-12,6;CL:0000047,7.96e-10,8;CL:0002319,8.59e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.03e-09;82!UBERON:0010122;9.88e-08;2!UBERON:0006238;8.06e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-41!82;UBERON:0005743!1.17e-38!86;UBERON:0000073!2.34e-37!94;UBERON:0001016!2.34e-37!94;UBERON:0001893!3.28e-37!34;UBERON:0002020!6.57e-37!34;UBERON:0003528!6.57e-37!34;UBERON:0002791!5.18e-36!33;UBERON:0001869!1.03e-35!32;UBERON:0000955!8.38e-35!69;UBERON:0006238!8.38e-35!69;UBERON:0002780!2.21e-33!41;UBERON:0001890!2.21e-33!41;UBERON:0006240!2.21e-33!41;UBERON:0003080!2.63e-32!42;UBERON:0001049!1.12e-30!57;UBERON:0005068!1.12e-30!57;UBERON:0006241!1.12e-30!57;UBERON:0007135!1.12e-30!57;UBERON:0000956!5.40e-27!25;UBERON:0000203!5.40e-27!25;UBERON:0002616!4.94e-26!59;UBERON:0002619!2.32e-24!22;UBERON:0000153!1.44e-23!129;UBERON:0007811!1.44e-23!129;UBERON:0000033!9.26e-23!123;UBERON:0001950!2.75e-22!20;UBERON:0004121!4.01e-21!169;UBERON:0000924!4.60e-21!173;UBERON:0006601!4.60e-21!173;UBERON:0003056!4.05e-20!61;UBERON:0003075!3.76e-18!86;UBERON:0007284!3.76e-18!86;UBERON:0002346!7.71e-18!90;UBERON:0007023!1.82e-13!115;UBERON:0002420!4.44e-12!9;UBERON:0007245!4.44e-12!9;UBERON:0010009!4.44e-12!9;UBERON:0010011!4.44e-12!9;UBERON:0000454!4.44e-12!9;UBERON:0002308!2.90e-11!9;UBERON:0000125!2.90e-11!9;UBERON:0009663!1.17e-09!7;UBERON:0000200!5.32e-09!6;UBERON:0001871!7.05e-09!7;UBERON:0000475!8.77e-09!365;UBERON:0001872!7.38e-08!5;UBERON:0000349!2.10e-07!5;UBERON:0000369!4.08e-07!4;UBERON:0002435!4.08e-07!4;UBERON:0000204!4.08e-07!4;UBERON:0010082!4.08e-07!4;UBERON:0000064!5.82e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.93e-43;20!UBERON:0001869;6.66e-39;32!UBERON:0002619;1.23e-38;22!UBERON:0001893;3.72e-36;34!UBERON:0002791;5.36e-36;32!UBERON:0003528;1.10e-33;34!UBERON:0002020;1.10e-33;34!UBERON:0000956;1.28e-33;25!UBERON:0000203;1.28e-33;25!UBERON:0002780;7.32e-25;41!UBERON:0001890;7.32e-25;41!UBERON:0000200;1.10e-17;6!UBERON:0000955;2.51e-16;68!UBERON:0000073;1.07e-15;53!UBERON:0002616;1.07e-15;53!UBERON:0001871;2.95e-15;6!UBERON:0001872;4.64e-15;5!UBERON:0001017;6.95e-15;75!UBERON:0001016;6.21e-14;83!UBERON:0000369;1.33e-13;4!UBERON:0002435;1.33e-13;4!UBERON:0000204;1.33e-13;4!UBERON:0002420;3.36e-12;9!UBERON:0007245;3.36e-12;9!UBERON:0010009;3.36e-12;9!UBERON:0010011;3.36e-12;9!UBERON:0000454;3.36e-12;9!UBERON:0005383;9.73e-11;3!UBERON:0005382;9.73e-11;3!UBERON:0001870;1.16e-09;3!UBERON:0002067;4.17e-08;9!UBERON:0009663;9.37e-08;7!UBERON:0001873;9.88e-08;2!UBERON:0002702;3.15e-07;2!UBERON:0002771;4.93e-07;2!UBERON:0001876;8.90e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.00e-44,32;UBERON:0001950,5.04e-43,20;UBERON:0001893,5.93e-41,34;UBERON:0002791,5.13e-40,32;UBERON:0002619,7.35e-39,22;UBERON:0003528,2.21e-37,34;UBERON:0002020,2.21e-37,34;UBERON:0001017,8.05e-37,81;UBERON:0002780,2.30e-36,41;UBERON:0001890,2.30e-36,41;UBERON:0003080,2.30e-36,41;UBERON:0006240,2.30e-36,41;UBERON:0001016,1.67e-34,89;UBERON:0000956,8.10e-34,25;UBERON:0000203,8.10e-34,25;UBERON:0000955,1.36e-29,68;UBERON:0006238,1.36e-29,68;UBERON:0000073,8.12e-27,53;UBERON:0002616,8.12e-27,53;UBERON:0001049,4.62e-25,56;UBERON:0005068,4.62e-25,56;UBERON:0006241,4.62e-25,56;UBERON:0007135,4.62e-25,56;UBERON:0003056,9.91e-25,61;UBERON:0000200,1.18e-17,6;UBERON:0002346,3.67e-17,86;UBERON:0004121,4.77e-17,171;UBERON:0000924,4.77e-17,171;UBERON:0006601,4.77e-17,171;UBERON:0003075,8.62e-17,82;UBERON:0007284,8.62e-17,82;UBERON:0001871,2.09e-15,6;UBERON:0010314,2.98e-15,132;UBERON:0001872,3.44e-15,5;UBERON:0000369,1.37e-13,4;UBERON:0002435,1.37e-13,4;UBERON:0000204,1.37e-13,4;UBERON:0010082,1.37e-13,4;UBERON:0010371,3.51e-13,104;UBERON:0002420,2.68e-12,9;UBERON:0007245,2.68e-12,9;UBERON:0010009,2.68e-12,9;UBERON:0010011,2.68e-12,9;UBERON:0000454,2.68e-12,9;UBERON:0011216,1.07e-11,223;UBERON:0005383,9.76e-11,3;UBERON:0005382,9.76e-11,3;UBERON:0001870,1.07e-09,3;UBERON:0007023,3.01e-08,114;UBERON:0002067,4.21e-08,9;UBERON:0004016,4.21e-08,9;UBERON:0010083,4.21e-08,9;UBERON:0009663,9.54e-08,7;UBERON:0001873,9.90e-08,2;UBERON:0010122,9.90e-08,2;UBERON:0002702,3.74e-07,2;UBERON:0002771,5.09e-07,2;UBERON:0001876,6.12e-07,2 | |||
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|short_description=p1@SP9 | |short_description=p1@SP9 | ||
}} | }} |
Latest revision as of 07:06, 18 September 2015
Short description: | p1@SP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SP9_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 1bp_to_ENST00000394967_5end |
EntrezGene: | SP9 |
HGNC: | 30690 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 2.58e-12 | 6 |
neuronal stem cell | 7.96e-10 | 8 |
neural cell | 8.59e-08 | 25 |